Hippoglossus stenolepis (Pacific halibut): 118116565
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Entry
118116565 CDS
T08308
Symbol
atl1
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118116565 (atl1)
Membrane trafficking [BR:
hsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118116565 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
118116565 (atl1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
118116565
NCBI-ProteinID:
XP_035024227
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All DBs
Position
10:5037457..5048421
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AA seq
558 aa
AA seq
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MSKHRKDRDSWGSLSDKPVYDWSSEEEEPDGRARPVQVLLVKDDHTFELDEAALSRILLA
EEVRDRDVVAISVAGAFRKGKSFLMDFMLRYMYNHASDLWLGDADEPLTGFSWRGGSERE
TTGIQIWSEVFLVDKPDGGKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFPYGQEGGMQFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPHFDGRIQEIDGEFINNLKV
LVPWLLSPSNIDVKEINGSKITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAAAKDLYNKKMEGVCGGDRPFLAPSELQARHGVIREEALQVFRGVKKMGGEEFSRRYLQ
QLEGEIDEVFVQYIKHNDSKNIFHAARTPATLFVVIFVMYVAAGITGFVGVDVIASLCNM
ILGLALITLCTWAYIRYSGEYRELGAVIDQVAGALWDQGSTNEALYKLYNVAANHRHLYH
HAFPGPQVDEEEQERKRD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcaccgtaaagacagagacagctgggggtccctcagcgacaaacccgtctac
gactggagctcggaggaggaggagccggacggacgagcccggcccgtccaggtgctgctg
gtcaaagacgaccacaccttcgagctggacgaggcggcgctcagtcgcatcctgctggcg
gaggaggtcagagaccgcgacgtggtggccatctctgtggctggggcgttccgcaagggc
aagtccttcctcatggacttcatgctgcgctacatgtacaaccacgcctcggacctttgg
ctcggcgatgcagacgagcccctgaccggcttctcctggcgggggggctcagagagggag
accaccggcatccagatctggagcgaggtcttcctggtggacaagccagatggaggaaag
gtggctgtgctgctgatggacacacaggggacgttcgacagccagtcgacgctgcgggat
tcagccaccgtgttcgccctgagcaccatgataagctccatgcaggtttacaacatctca
cagaatgtacaggaggacgacctccagcacttgcagctcttcactgagtacggcagatta
gcaatggaggagactttcctcaaacctttccagtccatgattttcctcgttcgagactgg
agtttcccgtacgagtttccctacggacaggaaggaggcatgcagttcctcgagaagagg
ctgaagatctccgagaaccagcatgaagagctgcagaacgtgcgtaaacacatccactcc
tgcttcaccaacatctcctgtttcctgatgccccacccgggcctcaaggtggccaccaac
cctcactttgatggaagaattcaagaaatcgatggcgagttcatcaacaacctgaaggtt
ctggtcccctggctcctcagtcctagtaacatcgacgtgaaggagatcaacggcagcaaa
atcacgtgcagaggcctggtggagtatttcaaggcctacatcaaaatttaccaaggggag
gagctgcctcatccaaaatccatgctgcaggccacagcagaggcgaataatttggcagca
gtcgcagctgcaaaggatctgtacaacaagaaaatggaaggggtgtgtggcggcgatcgg
cccttcctggcccccagcgagctgcaggcccgacacggcgtcatcagggaggaggccctg
caggtgttccggggcgtgaagaagatgggaggtgaggagttcagccgccggtacctgcag
cagctggagggggagatcgacgaggtcttcgtccagtacatcaagcacaatgactccaag
aacattttccacgccgcccgcacgcccgccaccctgttcgtggtcatctttgtcatgtac
gtggctgcgggcatcacaggctttgtgggcgtggacgtcattgccagcttgtgcaacatg
atcctgggtctggcgctgatcaccctctgcacctgggcttacatccgctactccggggaa
taccgagaactgggagccgtcatcgaccaggtggctggcgcactgtgggaccaggggagc
acaaatgaggccctctacaagctgtataatgttgcggccaatcacaggcacctgtaccac
cacgccttcccggggcctcaggtggatgaggaggagcaggaaaggaagagggactga
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