Hippoglossus stenolepis (Pacific halibut): 118116614
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Entry
118116614 CDS
T08308
Symbol
syne3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118116614 (syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118116614 (syne3)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
118116614 (syne3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
KASH
SYNE3
SR_desmoplakin_3
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
118116614
NCBI-ProteinID:
XP_035024295
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All DBs
Position
10:25866102..25946443
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AA seq
1101 aa
AA seq
DB search
MTQQKQQDFMERLEAALLWMQASQEILKANDNTQGPLDALEARLRETEKIHQSEHEGRVK
MDMALVAAEKLLENGDDELRSHTLAKLKDLKSLWEETSTYIIHCHSRIEWVWLHWSEYLK
AYEEFELWLTRQQRILNAGVELQLGLKEKLWQVDHQRVIVSDIHGQAVLLERLLNEAAAL
QDRTQDDSVEPQTQKRLQEAYKDVQERAEERLLLLQKIAEDHQTYQGSVQGFQSWLLSKT
KELTDLMDSENTAEIKLKALQALDDSVAGEEKNLQHIEGVAEAVRSSTSPAGVEVVVEEA
EELRLGWQRLRQGLCEAEEGLRLSLDSYSHYMANCQQLGEDIGRLRQLLQGLNQELDEGC
EIEDCTEEQIVGQWRKYTGVKNTLAREESQVELLKSQLKELFKFSVDSRQVSEDVLAVVK
EHQSVKSRATRLCSELQSGLRNILQDPLLVYTQWSHMVSQVLEASAEVTDFSHIAMIVQN
IERLLKDGVQLQEHFSLLHVKGDLLDSVFGHERSDALQGELGAAIKNRELLHTQLLQRKS
RLQALISRTKDFGEAYKLIHAKLAYLQDQLVVADGLHPDILAKKSQSDRYRMIQRDLVDC
EAHITALETLVSSSQSNRTNFERLYADWKHLQKAVRTKVNESEESIAVHESFHDSLLNIE
KWLMIMKQKLKSFHSSAGQWSIEGRQHEAERALGEFPEKEIQLQQMEVQGQGVLERTSKE
GQIHILQDMKRLRKSWLSLYNMSLNLHRLTKKISSSQRHPSTKFVLLNSSMEPTAWKDGG
LSVDSSFLTELSLGEEDSEFLAGGSRSQRGQKQDQSTETFGAFASPGPRQGDNLEGEAGE
GVLTGRSAWIQGHAEGHLMLAAQDDEHFTPSRTEKDSRHSFNGDEIDSSALSIHGSQGVP
KDTDEWPDNKSTGADNRILIGDRGVAALTAKGNTGHCKSRRNEFEAWLCKGNELLSGILS
TKRATLSAKELKIQQNTLEALQAGVAWGQEQFQLLLKEKQCRVSGSGSAEDVGLEEIRYH
WMLYKSKLKDVGDIRARSNAKKPGLLQRVCRLAFILWVPLLALLLLLFLLPLMDEGNSCS
FSNNFARSFNIMLRYDGPPPT
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcagaagcagcaagatttcatggagaggttggaggcggccctcttgtggatg
caggcttcccaggagatacttaaagccaatgacaacacacaggggccccttgatgccctg
gaggccagactcagggagacagagaaaatccatcagtcagagcatgaaggtcgtgtaaag
atggacatggcgctggttgcagcagagaaacttttggagaacggagatgacgaactgagg
agccacaccctagcaaaactcaaagatctgaaaagcctgtgggaggagacctccacctac
atcatccattgtcacagtcgaattgagtgggtgtggcttcactggagtgagtacctgaag
gcttacgaggagtttgagctctggctgacgaggcagcagcgcatcttgaatgctggagtg
gagctgcagctggggttgaaggagaagctttggcaggtggaccatcaaagagtgatagtt
agcgacattcatggacaggctgtgctgttggagaggctgttgaacgaggcggcagcactg
caagacagaacccaggacgacagtgtggagccccaaacccagaagaggctgcaggaggct
tacaaagacgtccaagaaagagctgaggagcgtctgttgctgcttcagaagatcgctgag
gatcatcagacataccaaggcagtgttcaggggttccagtcgtggctgctgtcaaaaacc
aaggagttaactgatctgatggacagcgagaacacagctgagattaagctcaaagcctta
caagctctggatgacagtgtggccggggaggagaagaaccttcagcatatcgagggtgtt
gcggaggcagtgaggagcagcacctctcctgcaggtgtggaggtagtggtggaagaggct
gaggagctgaggcttggctggcaaaggctgaggcagggcctgtgtgaggctgaggagggc
ctgcgcttgagcctggactcttacagtcactacatggccaattgccagcagcttggagag
gacattggccgcctcaggcagctgttgcaggggctgaaccaggagctggatgagggatgc
gagatagaggactgtactgaggagcagatagttggccagtggaggaaatacacgggtgtg
aagaatactctggcaagggaagagtcccaagtggaacttctcaaaagccagctcaaggag
ctctttaagttctcagtggactcacggcaagtttctgaggatgtcctggccgttgtcaaa
gagcatcagagtgtgaaatctagagcaaccaggctatgttcagagttgcagtcaggactg
agaaacattctccaggacccgctgctggtctacacccaatggagccacatggtctctcag
gtgttggaggcatctgctgaggttactgacttctcccatattgccatgatagtccagaac
atagagcgcctgctgaaggatggtgtccagttgcaggagcatttcagtctgctgcatgtg
aagggagacctgctggactctgtgtttggtcatgagaggtcggatgctttgcagggcgag
ctgggtgctgccatcaaaaacagagagctgctgcacactcagctgctgcagaggaagagc
agattacaggccttgatatcaagaaccaaggatttcggtgaagcctacaagttgatccac
gctaagctggcctatcttcaagaccaactggtggtcgcggatggccttcaccccgacatt
ttggccaagaaaagtcagtcagaccggtataggatgatccagagggacctggtggactgt
gaagcccatatcacagcactggagactctggtctcctccagtcagagcaacaggactaat
tttgagaggctgtatgctgactggaaacatcttcaaaaggcagtcaggacaaaggtgaat
gagagtgaggagagcattgcagttcatgagagcttccatgacagcctgctgaacatagag
aagtggctgatgatcatgaagcagaagttgaagtcatttcacagctctgcgggacaatgg
agcatagagggccgccaacatgaagcagagagagcactgggagaatttccagagaaggag
attcagctgcagcagatggaggtccagggtcagggggttttggagaggacttcaaaggag
gggcagatacacattctgcaagacatgaagcggctacgaaagtcctggttgtccctctac
aacatgagtctcaatcttcacaggttgacaaagaagatttcttcttcacaaaggcacccc
tccacaaaatttgttttactgaacagctccatggagccgacagcatggaaggatggaggc
ctgtctgtagacagctcattcctaacagaactcagtctcggtgaggaggacagtgagttc
ctggcaggaggctcaaggagtcagagaggccaaaaacaagatcagtcaacagagacgttt
ggagcttttgcaagccctgggcctagacaaggagataatctggagggagaggcaggggag
ggggtgctgacggggcggagtgcatggatccagggccatgctgaaggccacctcatgctg
gctgcacaagatgatgaacatttcactccatcaaggacagagaaggacagtcggcactca
tttaatggagatgaaatagattcctcggctttgagcattcatggcagccagggtgttccc
aaagacacagatgaatggcctgataataaatcaacaggggctgacaatcgcatcttgatt
ggagacagaggagtagcagcattaactgcaaaggggaacacaggacactgcaaatccaga
aggaatgagtttgaggcgtggctgtgcaaagggaatgaactcctctcagggatcctcagc
accaagagagcaaccctcagtgccaaagaactcaagatccaacagaacacacttgaagct
ctgcaggcaggagtggcctggggtcaagagcagttccagctgttacttaaggaaaagcag
tgcagagtgtctggttctgggtcagcagaggatgtgggtcttgaggaaattcgctaccac
tggatgctctacaagtccaaactgaaggatgtgggagacatcagagctaggagcaatgct
aagaagcccgggttgttgcagcgggtatgtcggctggcttttattctatgggtccctcta
ctggcactgctgctcctgttgttcctcctgcccctcatggatgaaggcaacagctgctcg
ttctccaacaactttgcccgatccttcaacatcatgcttcgctatgacggacctccaccc
acataa
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