Hippoglossus stenolepis (Pacific halibut): 118116642
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Entry
118116642 CDS
T08308
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118116642
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118116642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-rbx1
U-box
Prok-RING_4
zf-Nse
zf-RING_6
DUF4618
zf-ANAPC11
DUF4200
PEHE
SidF
Motif
Other DBs
NCBI-GeneID:
118116642
NCBI-ProteinID:
XP_047197627
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All DBs
Position
10:2179078..2180445
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AA seq
455 aa
AA seq
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MASRSEEDLCCPVCQDVFRDPVLLSCSHSFCKDCLKSWWKDKEVRECPLCKRRSSMEEPP
NLVLKNVCETFLQERDHALCNLHSKKLRLFCLDHQQPVCVICRDSEKHSDHRFRPIDEAA
PQHKKQLQETLEPLKKKLQCFERVKVKFEQTAEHIKVQAGLTETQIKEQFKKLHQFLEEE
EEARMAALREEEEQKSQMMKEKIESLSRDITALSDTIRTTEDELRAEDVSFLLNYKAAVE
RVQQCPLLDDPQLASGALIDKAKHLGNLSFNIWNKMKDMVSYSPVVLDPNSAHPELVLSE
DLTSLRRGERQKLPDNPERFDYYFSVLGSEGFNSGTHSWDVLVRDSRIWSLGVRAEPVQR
KGDKLSESWRIRFHEGKYFAESPSALSVLSVQKIQRIRVKLDWNRGELSFSDPDTNKHIH
TFTHTFTQKMFPYFNIRDHLKLLPVNVSVTLDQSS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatcagaagaggatctctgctgtcccgtctgccaagatgtcttcagagat
cctgtccttctgtcatgtagccacagcttctgtaaagactgtttgaagagctggtggaaa
gacaaagaagtaagagagtgtccactttgtaagagaagatcttcaatggaggaaccacct
aacctggtgttaaagaacgtgtgtgagaccttcttacaggagagagatcatgctctctgc
aatctgcactcaaagaaactcagactcttctgtctggaccatcagcagccagtgtgtgtc
atctgcagagattcagaaaaacacagcgaccacagattcagacccatcgatgaagctgca
ccacaacacaagaagcagcttcaggaaactctggagcccttgaagaagaagttacagtgt
tttgaacgtgttaaagtaaagtttgaacaaacagcagaacacattaaggtccaggccgga
ctcacagagacgcagatcaaggagcagtttaaaaagcttcatcagtttctggaggaggaa
gaggaggccaggatggctgcactgagggaggaagaggagcagaagagtcagatgatgaag
gagaagattgagtctctgagcagagacataacggctctttcagacacaatcagaaccaca
gaggacgagctgagagctgaagacgtctcgttcctgctcaactacaaggctgcagtggaa
cgagtccagcagtgccccctgctggatgatccacagctggcctcaggagctctgatagac
aaggccaaacatctgggcaacctgagcttcaacatctggaacaagatgaaggacatggtc
tcctacagtcctgtggttctggacccaaactctgctcatccagaactcgtcctgtctgaa
gatctgaccagtttgagacgaggagagagacagaagcttcctgacaatccagagaggttt
gattattacttctcagtcctgggatctgagggttttaactcagggactcacagctgggac
gtcctggttagagacagtagaatctggtcactgggtgtaagagcagagcctgtccagagg
aagggagacaaactgtctgaatcatggagaataaggttccatgaaggtaaatactttgca
gagtcaccatcagcattatctgttctctctgtgcagaagatccagaggatcagagtgaaa
ctggactggaacagaggagaactgtcgttctctgatcctgatactaacaaacacattcac
accttcacacacactttcactcagaagatgtttccatactttaacattagagatcacttg
aagctgttacctgtgaatgtctctgtgacgctggatcagagcagttag
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