Hippoglossus stenolepis (Pacific halibut): 118116655
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Entry
118116655 CDS
T08308
Symbol
alms1
Name
(RefSeq) uncharacterized protein alms1
KO
K16741
alstrom syndrome protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118116655 (alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118116655 (alms1)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
118116655 (alms1)
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118116655 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
118116655
NCBI-ProteinID:
XP_047197542
LinkDB
All DBs
Position
10:3868406..3881458
Genome browser
AA seq
2274 aa
AA seq
DB search
MNAEPPERVEASLQLPADKDGSRTVGQSSMNQQGPRSLPAAGQDQWQRRRETDDWEPLQP
SGRSLQLEFQDSNLSPALFLLPGNSRVERNFTEYSLFQQSDHEFAPLRAYPDMSMASERF
HLPPQDRTTQASERGSLSQHPLAHATILSEEGTSSCCSLSQHSMPPGDESRREEMIHSRL
TDLQASRDDGGGREKDSETLTDLKNKLAAVDDDTFFLSKDIPAQHLLDILQKEVGMLSSS
SSALSSASEMSVKSITSFVQESKSLKISKPGIPQSLARREGPPGEASLPQQQTQQPDPSQ
TLSSEVGNITMGSRSTQPDDSSEVLYRELLSEAEGNRSREAGAKNQQQKSASPPAQFLTE
TSTGKPSVTRKNLSDLPWTGPFSSGVERLHREQDLWSSGNQTGIDGSYLGFLPQSQSTPG
VFKAPPKSNVKATLGKLSAIESDKESSYQSRTGISPQPAVPEPDVHRPDSADQCHEEHTS
AKVQSLPSLNYIQKVDAWRTNQSSGNPSLFDSLALQGFSGVSPKKKAYEAVSDSLNRILS
EQVRRLQQPPVSSALNENVTQESSAAPSGSSSPRRGEAVGSAPSDKDITGSAARPSSSPF
GRSQSHSSLSTVVMSAQKEKNETQDDVHHHLHQPSASAQPSPLVNLGQFSDVSVDRDFTL
SSSQDSYNSGVKLGTSIGASSVTSLEVDNYAPYWTSKLLSTSPLPGPREFNIEERIPLYL
HNLGIDQSPSTILNPFAPRGPIREPEFSPTDLCTIKGSIGTPSKSTQPSEGGSPYKGEFS
RSSIRSVDSSISIPFSMDSLGPAVSIPEPTKRASPPSDAEAVQTERRLTPASQREEDSHS
STLHLSQQQQQQQKDDTLTSSQNIFLPGERFDSDLSSVTQARSEERDLESPLQTSCSLDK
SAEDSFVSSKALLEINKLLSQSDKVVSAGASSASPAAPRLLPDDDLFLSFRRKTSKLQDS
SFSGAEDPRTRSSSLWARSSSDSMLTSEKPRQSSLGRESMTSSWQPDYPSTQSLTTAPAA
GSTLVLSKPARRAEPEGCSAAPPDNKVPTQPPVIQSPPAVNPQQLISTSTETAAALEVEE
EPAPGGPAQSSSSSPAPDDTDQGGMSDGSSESSLAVRVAKLLQSESPATMMSSTPSMTDQ
EESKAREWIKLKVSGQQCEPLELDIEDRRRIEEIKKELLLKYPMKSQLSTDTESSAASSV
QRRQDPPQSAETFTPNQLSQPLQGLRTNLSDSSVQLRDPRRPDTLEAQVQKIAAREGVTL
PRTNPRALTSISIATCRRSTSPSPSTSPAHPISPASEPLHTSELWTADEHLKVNRPPTQN
EEKTTRELTSRFEPSSRLYTRKQSLDSQLMSGNQTRQDAVGGQFGNPPPPLQILNREDQR
DDLFIWDSSVSGAHGAERTTGSSPSESPATAGHVSHVHLTLSPKAADPSLASALSSSRAG
AATEMPRREFVLLRHSPSTASSPDEGVGLSSPPEWYETGEPREERGLERADTSTRFKSVV
PRRRITSAPKQAFTPRPRAEVSKRPLTHESAAVPVLLPYKPRGSEELFYVPQLEADVSST
GHSDTTMESSHTGSDDAVAPRFSSEVLGHQDPGLDRGVTIRHTEGIYSKRLRTANFKMQQ
PGHRDSSVTANKSSQTSANRTSRPSSQVSLGLTRLSSSNNPEAPKRDQGTSPMPFTRHHQ
PETNRETVQPVHMDLRCRTSHHLDQSSVPQTGGHQHTRDVAPPASPQSNIGLDELWQRFC
DRWTIEQSRPTSDQEASLLQRLERLSRLIHSRRRTNVSELQEENQKLGRRREDAAREEKR
HSNREDDGSLHEETKPPVPHQAQRTSQPAAENSRTSFSSSLSHSSSQSLTLSPADGDASE
SLSTVSGSMSSVDTARLVRVFGAHRVKHLKSGSSLGKLYNTINKQKEGREQRRERHGDHP
HLITPLETTGTGESSVPLETTGTGESPVPLETTGTGESSVAADSASSTSTYTPPSHRGPS
NTLAAKKTVKLLSKGIQTAGDLEIVRNATRRHTRDVGTTFPSPHETRASRQISSSSPSGE
RGRGGQKNPSKIQSSQKQRKSKRSPSKLYPAGVSWFISADDLRSEARKENQQQAEESARR
PSTAWFEPHGRTQPWREPLRQRQVHEDRTIHHTEPDTRTKTTSSGLTRVSLQEALELWRP
GFICRSTQRVKCLALQAEERKLQAVFIRERDELFSQPRGGGGPPRPAGTALLRRAVPRKE
MIQRSKLIYENLPEVQRRREEERRKAEYRSYRLNAQLYNKRITTRVLSRRTAWQ
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggagcctccggagagagtggaggcatctcttcagctgccggcggataaagat
gggagtcggacagttggacaatcctccatgaatcagcagggacctcgaagtcttcctgca
gccggacaggaccagtggcagcgcagacgggaaacagatgattgggagcctctacagccc
agtggacgctctttgcagctggaatttcaggacagtaacttgtctccagctcttttcctc
ttgcctggaaactctcgagtggaacgcaactttactgaatattctttattccaacaaagt
gaccatgaatttgctcctttaagggcgtaccctgacatgtccatggcgtcggagagattc
cacttgccgccccaggatcgcaccactcaggcgtctgagcgtggctcactgtcccagcac
ccgttggcccatgcaaccatcctttctgaagaaggaacgagcagctgctgctctctgtcc
cagcacagtatgccaccaggggacgaaagcagacgagaggaaatgattcactcccgactg
actgacctgcaggcatctagagatgatggtggtggcagagagaaggactctgagacacta
actgaccttaaaaacaagctcgcagctgtagacgatgacaccttctttctgagtaaggac
atccctgcccagcatcttctggacatccttcagaaagaggttggcatgctgagcagcagt
agtagtgcgctgtcctctgcctctgagatgtctgtcaagagcattacatcttttgtccaa
gagtctaaaagcttgaaaatttccaaaccaggaattccccaaagcttggctagaagagaa
ggtccacctggtgaagcttctctgccccagcagcagacgcagcaacctgacccgtcacaa
acgctgtcatctgaggtcggtaacatcaccatgggttcccgcagcacgcaacctgatgac
agcagtgaagtgttgtacagggagctgctgtctgaggctgaggggaaccgcagcagagaa
gctggagctaaaaaccaacagcagaaaagtgcttcaccacctgctcagtttcttacagag
acatccactggcaagccaagtgtgacccgaaaaaatctgagtgacctgccatggaccggg
ccgttttcatccggtgtggaaaggctgcacagagagcaagacctctggtcctcagggaac
caaacagggatcgatgggtcctacctgggtttccttccacagtctcagtccactccaggg
gttttcaaggccccacccaaatccaacgtcaaggctacattagggaaactgtctgccata
gaatctgataaagaaagctcgtatcaatcgaggactgggatctctccacagccagctgtt
cctgagcctgacgtccatcgtccagactcagcagatcagtgccacgaggaacatacctct
gcaaaagtccagtctcttccaagtcttaactacattcagaaagtagacgcttggaggacg
aatcagagctctggcaacccgtcactgtttgacagtctggcactgcaaggattttctggc
gtctctcctaaaaagaaagcttacgaggcagtgtctgactccctgaatcgcatcctcagt
gagcaggtgcggagattacagcagcctcctgtttccagtgctctcaacgagaatgtcaca
caggaatcctcagcagctccttctggctcctcctctccgagaagaggggaggcggtgggc
agcgcgcccagtgacaaagatatcactgggtctgcagcaagaccctccagctcccccttt
ggccggtcgcagtcccactcctctcttagcacagtagtcatgtcggcccagaaagaaaag
aatgagactcaggacgatgttcatcatcatcttcaccagccgagtgcctcagctcagccc
tcacctctcgtgaacctcggtcagttcagcgacgtgtcagtcgatcgagattttacactt
tcaagttcccaagatagttacaacagtggagttaaattaggaacttctatcggagcttct
tctgtcacgagcctggaggtggataattatgccccctactggacttctaaactgttgtca
acatcacctctgcccggacctcgagaattcaacatcgaagaacgaattccgttgtatctc
cacaacctgggtatcgaccagtctccctcaacgatattaaatccttttgcacccagaggg
ccaatcagagaacctgaattctctcccactgatctctgtacaattaaaggatcgattgga
accccgtccaagagcacccaaccctctgaaggtggcagtccctataaaggggagttttcc
aggtctagtattcggtcagtggactctagtatttccattccgttcagcatggacagtctt
ggtccggccgtatcgatcccagagccgaccaagcgagcatctcctccatctgatgctgaa
gctgtccagactgaacgcagactgacaccagcctcccagcgtgaggaggattcccactcc
tccacattgcatctcagccagcagcagcagcagcaacagaaggacgacactctaaccagc
agtcagaatattttcctgccaggagagaggtttgactctgacctctcatcggttactcag
gcgaggagcgaggaaagagatttggagtctcccttgcagacaagttgtagtttggataaa
agtgcagaggattcttttgttagctctaaggccttgttggagatcaataaactgctctct
cagtcggataaagtggtgtctgctggagcttcctcagcctcccctgcagcgccccgtctg
ctgcctgacgatgacttattcctctccttcaggaggaaaaccagtaaactccaggactcc
tcgttctccggagctgaagaccccagaactcgttcctcctcgctgtgggccaggtcatcg
tctgattccatgcttacctcagaaaaaccaaggcaaagctctttaggtcgagaaagcatg
acctcctcatggcagcctgattatccgtccacacagtctctcactactgcacctgctgca
ggttcaacccttgttctctccaaaccagccagacgggcggagcctgaaggctgcagtgct
gcacctcccgacaataaagtcccaacacaaccaccagtcatccagtctccacccgctgtg
aatccacagcagctcatctctacatcgacagagacggcggctgcactcgaggtggaagaa
gagcctgcgcctggaggtcctgcacagagcagctcctcgtcgcccgctcctgacgacaca
gatcagggagggatgagtgacgggagcagcgagagctcactggcagtcagagtggccaag
ttactccagagtgagtctccagccaccatgatgtccagtacgcccagcatgactgatcaa
gaggagagcaaagccagagagtggatcaaactgaaggtgtcaggtcagcagtgcgagcct
ctggagttggacatagaagatagaagacggattgaagagatcaagaaagagctgctgtta
aaatatcccatgaagagccagttgagtacagatacagagagcagtgcagcgtccagtgtc
cagaggagacaagatccacctcagtctgcagagacgttcacccccaaccagctgtctcag
cctctgcaaggcctcagaacgaacctgtctgactccagcgtgcagcttagagaccctcgt
cgcccagacactctagaagctcaagtacagaagattgctgctcgagaaggagtaaccctg
cccagaacaaaccctcgggccctcacgtccatctccatcgccacctgcaggcgctccact
tccccttctccctccacgtcgcctgcacatcccatcagcccggcctcagagccactccac
acgagcgagctctggacagcagacgaacaccttaaagtgaacagaccacccactcaaaac
gaggagaagacaaccagagagctgacatcaaggtttgaaccgagcagtcgtctctacacc
agaaagcaaagcctagattctcagttaatgtcaggaaatcagacgaggcaagatgctgtg
ggaggccagtttggaaaccctcctccacccttgcagattttaaatagagaggatcagcga
gatgatttattcatctgggacagctctgtgtctggtgcccacggagctgaaagaaccaca
ggttcatccccctctgaatctcctgccacggccggtcacgtctcccatgtccatctcact
ctgtccccgaaagcagctgatcccagcttggcctcggctctgagctccagtcgagctggt
gcagctacagagatgccacgtagagaatttgttctcctcagacactctccatccacagcc
agcagcccggacgaaggtgtgggtctgtccagtcccccagagtggtacgagaccggagag
ccgagggaagagcgggggcttgaacgagccgacacctccacccggtttaaatctgtggtt
cctcgacgaagaatcacctccgcacccaaacaagccttcacaccacgtcccagagctgaa
gtttccaaaaggcccttaacccacgaatcagcagcggtgcctgttctgttgccttacaaa
ccccgcggcagtgaggagctcttctacgtccctcagctagaagctgacgtctcctccact
gggcactcggacaccaccatggagagctcgcacacaggctcagacgacgccgtggcccca
cgcttcagcagtgaggtcctcgggcaccaggacccggggctggaccgcggcgtcaccatc
agacacacggagggcatctacagcaagaggctgagaacggctaacttcaaaatgcaacaa
cctggacacagagattcctcggtgacggcaaataaaagctctcaaacgagcgcaaaccga
acttcacgcccgtcctctcaggtgtcgctgggcttgaccagattgtcttcgtcaaacaac
ccagaagccccgaagagagaccagggaaccagcccgatgccgttcactcgtcaccatcag
ccagagacgaaccgtgagacagttcagccagttcacatggacctgaggtgtaggacgagt
catcacctggaccagagctctgtccctcaaacaggaggacaccagcacacgagggacgtc
gctcccccggcctccccacagagcaacatcggtctggacgagctgtggcagaggttctgt
gatcgctggaccatcgagcagtctcgtccaaccagcgaccaagaggcgtcgctgctgcag
aggctggagcgtctgtcccgtctcattcacagcaggaggagaaccaacgtgtcggagcta
caggaggaaaatcagaagctagggaggaggagagaagacgctgcgagggaagaaaagagg
cacagcaacagagaggatgatgggagtttacacgaagagacaaaacctcccgtccctcat
caggcccagcgaacatctcagcctgcagcggagaacagtcgcacctccttctcctccagt
ctctcccacagctcctcccagagtctgaccctcagtcccgcagacggagacgcgtcagag
agcttgtccaccgtgtcgggctccatgtccagcgtggacacggcccggctggtccgagtc
ttcggcgcacacagagtcaagcacctgaaaagcggctccagcctcggtaaactttacaac
accatcaacaagcagaaagaagggagggaacagaggagagagagacacggagaccacccg
cacctcatcacgccgttagagaccaccggcaccggcgagtcctctgtgccgttagagacc
accggcaccggcgagtccccggtgccgttagagaccaccggcaccggcgagtcctcagtt
gctgctgactctgcgtcgtccaccagcacctacacccccccatcccaccgcggaccctcc
aacactctggcagccaagaagacggtgaaactgctcagcaaaggcatccagacagctggt
gacctggagatcgtcagaaacgcgacccggcgccacaccagagacgttggaaccacgttc
ccctcgcctcatgaaaccagagcgtcgaggcagatttcatcttcctcacccagtggagag
agaggaagaggagggcagaagaatccctctaagattcagtcctcacagaaacagaggaag
agcaagcggagcccatcaaagctttatcctgcaggcgtctcttggttcatctctgctgac
gacctgcgctccgaggcgaggaaggagaaccagcagcaggcggaggagtcggcacggagg
ccgagcaccgcctggtttgagccgcacggcagaacccaaccgtggagagaaccgctcaga
cagagacaagtccacgaggacagaaccatacaccacacggaacctgataccagaaccaag
acgacgtcgtctggtctcacacgcgtctctctgcaggaggcgctggagctgtggcgcccg
gggttcatctgtcggtccacgcagagggtgaagtgtctggctctgcaggcggaggagagg
aagcttcaggccgtcttcatcagagagagagacgagctcttcagccagcccagaggaggg
ggggggccgccgaggcctgcaggcaccgctctgctgaggagggctgttcccaggaaggag
atgatccagaggtccaaactgatctatgagaatctgcctgaggtgcagaggaggagggag
gaggaacggaggaaagcagaatacagatcttaccgactgaacgcacaactctacaacaag
agaatcaccacccgtgtcctgagcagacgaacagcctggcaatga
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integrated database retrieval system
