Hippoglossus stenolepis (Pacific halibut): 118116665
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Entry
118116665 CDS
T08308
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118116665 (lingo2b)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
118116665 (lingo2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
LRR_5
Ig_2
ig
LRR_9
LRR_EndoS
LRR_Zer-1
V-set
LRRNT
Ig_PDGFR_d4
Sp38
Motif
Other DBs
NCBI-GeneID:
118116665
NCBI-ProteinID:
XP_035024374
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All DBs
Position
10:22009039..22047833
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AA seq
622 aa
AA seq
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MTEDNVGKRDMRHPAPHHCHLILGGALVLLLVSSAFSCPARCECSAQSKSVSCHRKRLPT
IPEGIPIETRVLDLSKNKLRIVTPDNFSSFQQLEDLDLSDNLISVVEPGSFRSQLALRSL
SFRSNVLQLIPAGVLSGLTNLTRLDISHNRLVVLLDHAFQDLRRLSSLEVGDNELVFISQ
RAFTGLLGLQILTLERSNLTVVPTEALAHLHSLVELRMRYLSISFLKPFSFKRLSRLRTL
EIDYWPWLDTLPPLSLHGLNLTMLFITNTNLSAFPGAALRNLPYLTHLNLSNCRIQHIHQ
GELGQLPHLLELRLQGAQLLSIEPFAFVGLKSLKLLDVSQNRLDSLERGVFASPESLQRL
CLGGNPLVCDCRLLWLLNSHKPPSLQILDVQPECTAPEHLLGKNLRDLKEPLVSRYMTCT
KPRIGPNTTQLLMADEGQPARLSCMAEGAPRPSVVWITPHRRYVTAKSSGRVEVQPDGTL
EIKAAELHDSGVYLCIASNPAGNASLSASLAVKSLSIGDRSPYSNRSSNYLTDSNSTWGN
GTVLYNMTVPIDIKTIIISTAMGCLSFLGVVVFCFLILFIWSRGKGRHKSNFDIEYVPRK
SNGAAAEVTETSGPRRVNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggacaacgtgggtaaaagagacatgcgacacccagccccgcatcactgccac
ctcatcctgggtggggcattggtgcttctcctggtcagctcagccttcagctgccccgcc
cgatgtgagtgctccgcccaaagcaagtcggttagttgccaccgcaagcgcctgcccact
atccctgaaggcatccccattgaaacgcgcgtcctggacctcagcaagaacaaactacgc
atcgtcacaccggataacttctcttcattccagcagctggaggacttggatctcagtgac
aacctcatcagcgtggtggagcccggctcatttcgctctcagcttgctctacgctcgctc
agcttccgcagtaacgtgcttcagctgattcctgccggcgtactgtccggcctgaccaac
ctcacccgccttgacatcagccacaaccgactggtggttctcctggatcatgccttccaa
gatctgcgcaggttatcatccctggaggtgggtgataatgagctagtttttatctctcag
cgggcttttacagggttacttggactccaaattttgaccctggaacgttccaacctgacc
gtggtccctactgaggctctggcacatctgcacagcctggtcgaactgcgcatgcgctac
ctgagcattagttttctaaagcctttctcctttaagaggttatctcgtctccgcacacta
gagattgattactggccctggctggacacgctaccccccctctccctgcatggactcaac
cttacaatgttgttcataaccaacacaaacctgtctgccttccccggtgcagcgctgcgt
aacctaccctacctcactcatctcaacttgtccaactgccgcatccagcacatccatcag
ggagagctgggccaactcccacatctgctggagctccgcctccaaggggctcagctgctt
tctattgagccgtttgcttttgtgggcctcaaatcgttgaaactattggatgtgtcacag
aaccgcctggactctctggagaggggagtgtttgcctcaccagagagcctccagaggctt
tgtctgggaggaaatccattagtgtgcgactgcagattgctttggctgctcaatagccac
aagcccccatctctgcagattctggatgtccagcctgagtgcaccgcccccgagcacctc
ctggggaaaaatctgcgtgacctcaaggagcctctggtgtccaggtacatgacctgcact
aaaccacgaattgggcccaacacgacccagttgctgatggctgatgagggtcagcccgcc
cgcctcagctgcatggcagagggagcgccacggccctctgtggtctggattacacctcac
agacgctatgtcacagccaagagcagtggaagggtggaagtccaaccagatggtaccctg
gagatcaaggcagcggagctgcatgacagcggggtttacttgtgtattgccagtaaccct
gctggcaatgctagtctgtcagcctctttagctgtgaagagcctgagcattggggacaga
tctccctacagcaacaggagctcaaactatttgacagactctaacagcacatgggggaat
gggacggtactgtacaacatgacagtccctatagacattaagactatcattatatctaca
gccatgggctgcctgtccttcctaggtgtggtcgtgttctgcttcctgatactgttcatc
tggagccgagggaaaggacgccataagagcaactttgatattgaatatgtccctcgcaaa
tccaacggggcagcagctgaggtgacagaaacaagcggcccgagacgggtcaacatgaaa
atgatttga
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