KEGG   Hippoglossus stenolepis (Pacific halibut): 118116783
Entry
118116783         CDS       T08308                                 
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    118116783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsp03000]
    118116783
   03021 Transcription machinery [BR:hsp03021]
    118116783
Transcription factors [BR:hsp03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    118116783
Transcription machinery [BR:hsp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     118116783
  RNA polymerase III system
    TFIIIB
     118116783
  RNA polymerase I system
    SL1/TIF-1B
     118116783
SSDB
Motif
Pfam: TBP DUF3378 ScoMcrA_N
Other DBs
NCBI-GeneID: 118116783
NCBI-ProteinID: XP_035024534
LinkDB
Position
10:15686981..15687675
AA seq 186 aa
MDSGNEAIDILVTNVVATFTTQCPLILRTIALNGFNVIYKREAGQVQMKLRKPKITASIW
SSGKVMCTGARSEDESKRGARRVARCLQKLGFNVRFSAFKVVNVLAVCYMPFAINLIDFT
KNNFPNVSYEPELHPSATYRNKKIKATVQVFSTGSITITGPNVKNVVKGVEKVYPLLFQC
KTPLRK
NT seq 561 nt   +upstreamnt  +downstreamnt
atggattccggcaatgaggcaatcgatatcctcgtcaccaatgtggtggcgactttcacc
acccagtgtcccctcatcttacgcaccattgccttaaatggattcaacgtcatctataag
cgagaagctggacaagtccagatgaagcttcgtaaacccaagataaccgcctcaatttgg
tcatcagggaaagtcatgtgcactggagcaagaagtgaggatgagtcgaaacgtggtgct
cgcagggtagcgcgctgtctgcagaaactaggcttcaacgtgaggttttcagccttcaaa
gtcgtgaatgtgctggcagtttgctacatgccctttgcaatcaacctcatagacttcact
aagaacaacttccccaatgtcagttacgaaccagagctccatccatctgccacatacagg
aacaaaaagatcaaggctactgttcaagtgttctccactggcagcatcacaattacagga
ccaaatgtgaagaatgtggtcaagggtgtggagaaagtctacccactgctgtttcagtgt
aagacacccctacgcaaataa

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