Hippoglossus stenolepis (Pacific halibut): 118116910
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Entry
118116910 CDS
T08308
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118116910 (msh4)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118116910 (msh4)
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Ortholog
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
118116910
NCBI-ProteinID:
XP_035024781
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All DBs
Position
10:13525507..13533221
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AA seq
925 aa
AA seq
DB search
MIRSSTEEVTTGGDASDSGQTWAASPVDRGGLNEATSHGPRSTSSTSSGSSRQSLDGGCS
SSGLRATLPPTGPGQFHHGVTVGRINPSVVATTSDSSSFRSHVGTPRLRRTPGAAGTHPA
QTPLTDHTATSCSSATTPSAASVIVAVVEGRGLARGEIGMASLNLKCPELVLCQFADTGT
YAKVITKIHILVPLEILMPDTASEKGKGTKLFKLITENFPCVAFTAIQRKYFNERKGLEY
IQQLCAPEFGTVLMEVQAKYYCLAAAAALLKYLEFIQNSVYAAKSLKVSFKGSEQTTMID
SASATNLELVVNNRDHRSEHSLLGVLNHTKTPGGARRLRSNILEPLVDVDTINIRLDAVH
ELLQDEDLFFGLKNAIGHFLDIDQLLSVLVQIPKQETVQVAEAKITHVIQLKHTLDLVPR
LRMVLKNCNTALLKAYSTSLEDTRFDLILEQIKTVINDDTTYLKGSLNMRTQKCYAVRPN
VNEFLDIARRAYTEIVDDIAGLVNQMGEKYGFPMRTSFSTARGFFIQMKLEGVVLPGGNL
PPEFIKVSKLKNNYGFTTADLMKMNDRCDEALREIFHISYVVICQLLSTVHEHIHCLYKL
SDAVSMLDMLLSLANACTISDYVRPEFTDTLAIKQGRHPILERMAGQQPVSNNSYISEGS
NFVIITGPNMSGKSTYLKQVALCQIMAQIGSFVPADYASFRVADQIFTRIGVDDDFETNS
STFMLEMKEISYIIHNASDRSLIIIDELGRGTGAEEGIGLCHSVCEFLLGLKAFTLFATH
FLELCQLESLYPNVENQHMEVQHTRSVDTDDESVVYTYLLSRGCSEERHYGLRAAEMTAL
PSSLIQEAKIIASNVSQQLLAKHHSDPETQRQRAVYHLATRLLQAARNSRLDPDSLRMYL
KGLRKQYEAELQAAGQPESMDTEEE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcagcagcacggaggaggtgacaaccggcggtgacgcctcagacagcggacag
acctgggcggcgtccccggtggacagaggcggactgaacgaagccacctcacacggtccc
cgctccacctcctccacctcctccggctcatcccgtcagagtttagatggaggctgctcg
agctccggcctcagagccacactccctccaaccggcccaggtcagtttcatcatggcgtc
acggtggggaggataaatccatcagtggttgcaaccacttcggacagctcctccttccgc
agccatgtaggaacacccagactgagaaggacccctggggccgcaggcacacatcctgca
cagacaccacttactgatcacactgcaacaagttgctcctctgcgacaacaccctctgct
gcctctgtgattgtagcagtggttgaagggcgtggtttggccaggggagagatcggcatg
gccagtctcaacttgaaatgtccagagctcgtactttgtcagtttgcagacactgggacg
tatgccaaggtcataaccaagattcacatcctggtgcctctggagatactgatgccagac
acggcgagtgagaagggaaaagggaccaagctgttcaaactcatcactgagaactttccg
tgtgttgctttcactgcgatccaaaggaagtatttcaatgagagaaaaggactggagtac
attcagcagctgtgcgctccagaatttggcaccgtcctcatggaagtgcaagctaaatat
tattgcctggcagctgcagctgctttgctgaaatacttagagttcatccagaactctgtc
tatgctgccaagtctcttaaagtgagctttaaagggagtgagcagacaaccatgatagac
tcagcctctgccactaacttggagctggtggtcaataacagagaccacaggagcgaacat
tctcttttaggagtgcttaaccacacaaaaacccctggtggtgctagaagattacgctcc
aacattctggagcctctggtcgatgtggacaccattaacatacgactggacgctgtgcat
gagctgctacaggacgaggatctcttcttcggcctgaaaaatgccatcggtcatttcctt
gacattgaccagctgctctcggttctcgtccaaatcccaaagcaggaaacagttcaggtt
gctgaagcaaagatcacacatgtcattcagctgaaacacacattggatctggtgccaagg
ttaaggatggtgttgaagaactgcaacacagctctacttaaagcctacagcacctcactg
gaagacaccaggtttgacttgatcctagagcagatcaagacagtgattaatgacgacacg
acctacctgaaggggagtctgaacatgcgcactcagaagtgttacgccgtgcgccccaat
gtcaacgagttcctcgacattgcccgcagagcctacaccgagatagtggacgacattgcc
gggctagtgaaccaaatgggggagaaatacggctttccaatgcgaaccagcttcagcaca
gctcgaggattcttcatccagatgaagcttgaaggtgtggttctgcctggagggaatctg
ccgccagagttcatcaaggtttccaagctcaagaacaactacggcttcaccactgcagac
ctgatgaagatgaacgaccgctgcgatgaggccctgagggagatctttcatatttcttat
gtggtgatatgtcaactgctgagcaccgtccacgagcacatccactgtctgtacaagctc
tctgatgctgtctccatgctggacatgctgctgtctctggctaacgcatgcaccatctca
gactatgtgcgtccagagttcacagacactctggcaataaagcagggtcgtcaccccata
ctggagcgaatggctggacagcagcctgtatcgaacaatagctacatctccgagggcagc
aactttgtcatcatcactggacccaacatgagtggcaagtccacctacctcaaacaggtg
gcgctgtgtcagatcatggctcaaataggatctttcgttccggctgactacgcctctttt
cgtgttgctgatcagatctttaccagaattggtgtcgacgatgattttgaaactaactct
tccaccttcatgttggaaatgaaagaaatctcttacatcatccacaatgcaagtgacagg
tccctgatcatcatagatgagctgggacgtggtaccggtgctgaagagggcattggcctc
tgtcactcagtgtgtgagttcctcctcggtctcaaggcgttcaccctgtttgctacacac
tttcttgagctgtgtcaactggagtctctttacccaaacgtggagaaccagcacatggag
gttcagcacacgcgcagtgttgacactgacgatgagagtgtggtgtacacgtatctgctg
agtcgaggatgctccgaggagaggcactatggtctgagagcagcagaaatgactgccctc
ccttcaagtttaatccaagaggcaaagataatagcctctaatgtcagccagcagctcttg
gccaaacatcatagtgatccagaaacacagaggcagagagctgtgtaccacctggccact
cgcctcctgcaggctgccaggaactccagactggacccagacagcctgcggatgtatctg
aaaggcctgaggaagcagtatgaggcagagctgcaggccgcagggcagccagagtcaatg
gacacagaggaggagtga
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