Hippoglossus stenolepis (Pacific halibut): 118117018
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Entry
118117018 CDS
T08308
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118117018
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118117018
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
SALM family
118117018
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118117018
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
fn3
Ig_2
LRR_9
LRRCT
Sp38
Ig_C17orf99
Ig_DSCAM-DSCAML_C
GP79
Motif
Other DBs
NCBI-GeneID:
118117018
NCBI-ProteinID:
XP_035024932
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All DBs
Position
10:19626853..19769001
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AA seq
786 aa
AA seq
DB search
MDKVVISLLLLGTAVMMVHACPKYCSCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLG
GNFILKVTTQDFANMTGLVDLTLSRNTISTIQPFSFIDLETLRSLHMDTNRLTELGPDDL
RGLINLQHLILNNNQLNQIADSTFDDLYPTLEDLDLSYNNLRSVPWEAIRKMVNLHQMSL
DHNLINFISEGTFTDLEKLARLDLTSNRLQKLPPDPIFARSQSSIVMSTPYTPMLSLSFG
GNPLHCNCEVLWLRRLERDDDMETCASPASLKGRYFWSVREEEFVCEPPLITQHTHKLLV
LEGQTASLRCKAVGDPMPTVHWVAPDDRLISNSSRATVYENGTLDITVTTSKDYGVFTCI
AANAAGESTASIELSIIQLPHLSNGTNRTTQSKSGLSDITSSTKISKGEPKPPEKVVTVS
EVTAVSALVKWTVSKSTPKVKMFQLQYNCSEDEVLIYRMIPMTNRAFVVTNLVPGVQYDL
CVLAIWDDTATTLTATNIVGCVQFITTEDYPQCQSLHSGFLGGTMILVIGGIIVATLLVF
IIILMVRYKVTSGINTNKLPTVSNTYSQTNGGLNRFNGAPPQVKSTVVVMREEMVEFKCG
SLQSSLSSSSSSSNSLESQPGRGAGDRYSMQGSECSTLPSKFRRHGHSAKARPNLDHLLG
AFTSLELRGAARDQQGTSGPPTAPNTMMTVAIAPPSDKEPLLGRAESTTMLGRLLGLPQE
GKPKRSHSFDMGHVGSTQCRSNYPRRISNIWTKRSLSVNGMLLQYDDSEDEKPTFESSEW
VMESTV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtggtcatcagtctcctgctcctgggaaccgcagtcatgatggtccatgca
tgtcccaaatactgttcttgccagaacctctcagagtctctcgggactctgtgcccctcc
aaaggtttgctgttcgtcccaccggacatcgaccggcgaactgtggagctccggctgggc
ggcaacttcatcctcaaggtcaccactcaggactttgccaacatgactggtctggtggat
ctaaccctgtcccgcaacaccatcagcaccatccagcctttctctttcattgacttggaa
accctcagatctctgcacatggacactaaccggttgaccgagctggggccggacgacctt
cgagggctgatcaacctgcagcacctgatactcaacaacaatcagctgaatcagatcgcc
gattcaacctttgatgatttgtatccgacactggaggatctggatttgtcctataataac
ttgcgcagcgtgccttgggaagccatccgcaagatggtcaacctccatcagatgagtctg
gatcataatctcatcaatttcatatctgaggggacttttacagatctagaaaaactggcc
cgtttggacctcacctccaaccgtctgcagaagctccccccggaccctatctttgcacgc
tctcagagcagtattgtgatgagcactccatacacacctatgctctctctaagctttggt
ggaaatccactgcactgcaactgtgaagtgctttggcttcgaaggctggaacgtgacgat
gacatggaaacctgtgcttctcctgccagtctcaaaggacgctatttttggtctgttcgt
gaggaggagtttgtctgcgagccccctttgatcacgcaacatacgcacaagctgctagtc
ctggaaggccaaacggcaagtttacgctgcaaagctgttggggatccaatgccaaccgtg
cattgggttgcccctgatgaccgtttgatcagcaactcctcccgtgcgacggtatatgaa
aatggcaccctggacattacagtcaccacatccaaggattacggtgtctttacttgcata
gctgctaatgctgctggggaatctacagcctccattgagctatcaattattcaactccct
catctgagtaatggtacaaatcgtaccacacaatccaagtctgggctttcggacataact
agctctaccaagataagtaaaggggaacctaaacctccagaaaaggtggtgactgtatca
gaagtgactgctgtctctgctctggtcaagtggactgtgagcaaatcaactccaaaggtc
aaaatgtttcagcttcagtacaattgttctgaggatgaagtcctcatttacaggatgatt
cccatgacgaacagagcctttgtagtcacaaatcttgtcccgggggtccagtatgacctg
tgtgtcttggccatctgggatgacactgctaccaccctcactgccaccaacattgtcggc
tgcgtccagttcatcactacggaggactatccgcagtgccagtctcttcacagtggattc
ctgggaggcaccatgatcctggtcatcggtggaatcatcgtggccacgctgctggtattc
atcatcattctcatggtgcgctacaaggtgaccagtggtatcaacactaataaattaccc
actgtgagcaacacgtactcgcagaccaatgggggattgaaccggttcaacggggctccg
ccgcaggtcaagtctacagtggttgtcatgcgtgaggaaatggtggagttcaagtgtgga
tctctccagagcagcctctcctcatcctcctcctcctctaactcattagagagccaacca
gggagaggggctggtgaccgctacagcatgcagggcagtgaatgcagcaccctgcccagc
aagttcaggaggcacgggcatagcgccaaagcacggccaaacctggaccaccttttgggg
gcctttacctcactggagctgcgaggggcagcaagggaccagcaagggacttctggccct
cccaccgctcccaatactatgatgacggtggctattgctcccccgtctgataaagaacct
ctgctaggaagggcagagtccaccaccatgctgggacgtctgctggggctaccccaggag
ggtaagcccaagaggagccactcgtttgacatgggccatgtggggtccacgcaatgtcgc
agcaactacccccgcaggatcagtaacatctggactaaacgcagtctgtctgtgaacggc
atgttgctgcagtatgatgacagcgaggatgagaagccaacatttgagagctccgagtgg
gtgatggagagcacagtttga
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