KEGG   Hippoglossus stenolepis (Pacific halibut): 118117036
Entry
118117036         CDS       T08308                                 
Symbol
larp1b
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsp03019]
    118117036 (larp1b)
Messenger RNA biogenesis [BR:hsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118117036 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 118117036
NCBI-ProteinID: XP_035024966
LinkDB
Position
10:2555080..2575420
AA seq 1103 aa
MSAEVESSQVDSGLTAEKNQNKSEAQREPPGQRGSDKPLQGGSEADRSPADTHRKCKEND
KENDQSGDADAAVEAAKRNVVEAPPPKVNPWTKRTTGRVAINTISSQDKDQQNALKVVRA
SKPRTRKSSKSSDFSDITNWPTPGELAKEQQQNVLNNGKKPSSSRGEKEKTSERPDRKSE
SSHDGGESKENQEAQPDPLGELPKDGESKTAPDAKSASLKKRGGEGNKRKWVSLPLEEGS
RDDGGRGDKTPSGAHTRSDTEPNSDSPDPTSPNHTLHNNRPHDSSRSWRSGPRDFGDEAA
SVRSDSGSVRGGVRGRGKGRGRGRGRGRGRYEFSQSFRDSQSSDGSAQADFGSNMVYYYD
DGSKVQMYTVDEKLLKEYIKRQIEYYFSLHNLERDFFLRRKMDVQGFLPISLIASFHRVQ
ALTTEVSLIVEALKSSTEVELVDDKVRCKIEPERWPIPTPPVGGSPRTDFSQLINCPEFV
PRQTLSSTNSASSPVKETPPESAESQDSAEADSSSQEELPTTDVFEDAAAPKPDPDAWIQ
VEKRHKQPSAKAKHVSDDVCVVASSPPSALPPDLLPSSGDSKTPPSNQAPAPAVPDQEEL
DFLFDEEMEQMAPRKNQFTDWSDEDNSDYELDDQDVNKILIVTQTPPHMRKHPSGDRTGN
HESRAKLTTDLAKAINDGLYYYEQDLWTGEEQIEVIKQEAENFKKLSVITKDEFDTLAPK
VPVDPNQEVPPPPMPVDSAAELSHSLPTTVPESPSTHEPRTPRTPRTPGRQDPNKAPRFF
PVMKESGTVDGQMSRKKKTRHSSNPPQEAHIGWVMDSREHRPRSTSISSSNASPSEAAPL
SGSYGCTPQSLPKFWHPSHELLRDNGFTQQGYHKYRRRCLNERKRLGVGQSQEMNTLFRF
WSFFLRDNFNRKMYEEFKQCSVEDAKDNYRYGLECLFRYYSYGLERRFRLDLFKDFQEET
LRDFEKGQLYGLEKFWAFLKYSKMKNQPIDPKLQEHLSQFKNLEDFRVVPPMGEEGGRRR
RHSSSAGDEGRRRRHPSNTTSKPTQASKSSSAAAPPAAAAATAAAAAQNAPKDNAQKSTA
GASAQAKKTESGAGKKQSAAPNK
NT seq 3312 nt   +upstreamnt  +downstreamnt
atgtccgcagaggtcgagagcagccaggtcgactccggtctgacagcggagaagaaccaa
aacaagtccgaggcgcagagggagccgccggggcagaggggctccgacaagccgctgcag
ggcggctccgaggcggaccggagccccgcggacacccacaggaagtgcaaggagaacgac
aaggagaacgaccagagcggcgacgcggacgcggctgtggaggcggcgaagaggaacgtt
gtggaggcgcctccgccgaaagtcaacccgtggacgaagaggaccacgggcagggtcgcc
atcaacaccatcagctcccaggacaaagatcaacaaaacgctctgaaagtcgtccgagcc
agcaaacccaggacgagaaagtccagcaagtcgagtgacttcagcgatatcacaaactgg
cccacacccggggaactggccaaagagcagcagcagaatgtcctcaacaacggaaagaag
cccagctcctctcgcggggagaaggagaagacgagcgagcgaccggacaggaaatctgag
agcagccacgacgggggtgagagcaaagagaaccaggaggctcagcccgacccgctggga
gagctgcccaaagacggagagtccaagacggcaccggacgccaagagcgccagcctgaag
aagagaggaggtgagggtaacaaacgtaagtgggtttctctgccgctggaggaagggtcc
cgggacgacggcggccgcggcgacaagacgcccagtggggcccacacacgctcggacacg
gagcccaacagcgactcccccgaccccacgtcgcccaatcacacgctccataataacagg
ccgcatgatagcagcaggagttggagaagtgggccgcgggacttcggcgacgaggccgcc
agcgtccgaagtgacagtgggagcgttcgtggtggagtacgaggccgagggaaaggtcgt
gggcgcgggagaggtcgtggacgaggtcgttatgaattctcccagagcttcagagactct
cagtcgtccgacggctctgctcaggccgacttcggctccaacatggtttactattacgac
gacggcagcaaggtccagatgtacacggtggatgaaaagctcctcaaggaatacatcaaa
cgtcaaatcgagtactacttcagcctccacaacctggagcgagactttttcctgaggaga
aagatggacgtgcagggcttcctccccatctccctgatcgccagcttccaccgagtccag
gccctgaccaccgaagtcagcctcatcgtggaggccctgaagagcagcacggaggtggag
ctggtggacgacaaagttcgctgtaaaattgagccggagcgctggcccatccccaccccc
cccgtcgggggctccccccgaaccgacttctctcagctcatcaactgccccgagttcgtt
cctcgtcagactctcagctccacaaactccgcttcatcgcccgtgaaggagactcctcct
gagtctgccgagtctcaggactcagccgaggccgactcctcgagccaagaggagctcccc
accacagacgtctttgaagacgccgccgcccccaagccggaccctgacgcctggatccag
gtggagaaacgccacaagcagccgtcagcaaaggcaaagcatgtcagtgatgatgtgtgt
gttgtagcctcctctcctccctcagcgctcccacccgatctcctcccctcctcaggcgac
agtaagacgcctcccagcaaccaagctcctgcaccggccgtgcccgaccaggaggagctg
gacttcctattcgacgaggaaatggagcagatggcgcccaggaaaaaccaattcaccgac
tggtcagacgaggacaactcggactacgagctggacgaccaagacgtcaacaagatcctc
atcgtcacccagactcctccccacatgcgtaaacaccccagtggcgaccggacgggcaac
cacgagtcccgtgccaagctcactaccgacctcgccaaagccatcaatgacgggctgtac
tactatgaacaggacctatggacgggagaggaacagatcgaggtcatcaagcaggaagcg
gagaatttcaagaagctgagcgtcatcactaaagacgagtttgacactctcgcccccaaa
gtgcctgttgacccgaaccaggaagtgccacctcctccgatgccagtggacagcgccgca
gaactgtcccactctctgcccacaacggtcccagagtcgcccagcactcacgagccccga
acccccagaacgcctcgcacccccggacgccaggaccctaacaaggcgccgcgcttcttc
cccgtgatgaaggagagcggcaccgtcgacggacagatgtcgaggaagaagaagacacgc
cacagctccaaccctccacaggaggcgcacatcggctgggtgatggactcccgtgaacac
cggccgcgctccacatccatcagcagctccaacgcgtctccatcagaagcggcgccgctg
tcgggaagctacggctgcaccccccagtctctgcccaaattctggcatccatcccacgag
ctgctgagggacaacggcttcacccagcagggttaccacaagtaccgccgacggtgcctt
aacgagaggaaacggttgggagtcggtcagtcacaggagatgaacaccctgttcagattc
tggtcctttttcctgagggacaacttcaacaggaagatgtacgaggagttcaaacagtgt
tcagtggaggacgccaaagacaactacaggtatggactggagtgtctgttcagatactac
agctacggtttagagaggagattcaggttagatctgttcaaggactttcaagaggagacg
ctcagagactttgagaaaggtcagctctacggtctggagaagttctgggccttcctgaaa
tattcaaagatgaagaaccagcccattgaccccaagctgcaggaacacctctcccagttc
aagaacctggaggacttcagggttgtgcccccgatgggagaggagggaggcaggaggaga
cgccactcgtcctcggccggggacgaagggaggcgtcggcgacatccttccaacactacc
tcaaagcccacgcaggcctccaaatcctccagtgctgctgctccacctgccgccgccgcc
gccaccgctgctgctgctgcacagaacgcacccaaagacaacgcccagaaatccaccgca
ggagcgagcgcccaggcgaagaagacggagtccggggccgggaagaagcagagcgctgca
ccaaataaatga

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