Hippoglossus stenolepis (Pacific halibut): 118117058
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Entry
118117058 CDS
T08308
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X2
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118117058 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118117058 (capn3a)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
118117058 (capn3a)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C2: calpain family
118117058 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
118117058
NCBI-ProteinID:
XP_035025015
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Position
10:complement(4042001..4054086)
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AA seq
713 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPLRFNSQDFSVLRQECVQRKNPFEDETFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYAGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKPSQHKDSKVRLVRLRNPWGQVE
WNGPWSDNSKEWATLSKTEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVGCTFVVAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFILRVFSEKKNTSEEIENRIEADHPVPAPASAGEES
EEDQQFRTIFQEIAGDDMEITANELKNVLNRVITKHKDLNTEGFSLESCRSMIALMDMDG
TGRLNLQEFRHLWNKIKQWQGIFKHYNADQSGSINSYEMRNAVNDAGFRLNNQLYDIITM
RYANESMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccgtctggctttttctgcgaccggctgatccgggaacgagagaggagg
gacggggaaggttctctgaacaagccgctgcgcttcaacagccaggacttcagcgtcctg
agacaggagtgcgttcagaggaagaaccctttcgaggatgagaccttcccggccaccgtg
gagtccctgggcttcaaagagctcggacacaagtccaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatctgcgagaaccctcagttcattgtcggaggcgccagtaggacg
gacatctgccagggagatctgggtgactgctggttgctggcggccatcgcctgtctcacc
ctgaacgagaagcttctgtatcgtgttgttcctcaggagcaaagcttctctgagggctac
gccggcatcttccacttccagttctggcgctatggcgactgggtcgatgtcgtcattgac
gaccgcatcccaaccttcaacaaccagctggtcttcactaagtcggccgagaggaacgag
ttctggagcgcgctgctggagaaggcctacgccaaacttcacggctcctacgaggccctg
aagggtggaaacaccaccgaggccatggaggacttcaccgggggagtcacggagttctac
gagatgaaggaagctcctaaagagctctacaagatcatgaagaaagctctggagagaggc
tcgctgatgggctgctccatcgattccctggttcccgctcgcttcgagactcggactgtg
acgggacttgtgaagggtcacgcctactctgtgacggcggtggaggagtgtaaaccgtct
cagcacaaggactctaaagtccgtctggtgcgtctcaggaacccgtggggccaagtggag
tggaacggcccctggagtgacaactctaaggagtgggccacactgtctaagactgagaaa
gagaagctgcagcaccagagcgccgaggatggagagttctggatgtcattcgaggatttc
aagaagaactacaccaagattgagatctgcaacctcacccccgatgccctggaggacgat
aagatccacaagtggacggtgtctgtgaacgagggtcgctgggtgagaggctgctccgcc
ggaggctgcaggaactatccagacactttctggaccaaccctcagtaccgcctgcgtctg
ctggaggaggacgacgatcccgaggacaacgaggtgggctgcaccttcgtggtggccctg
atgcagaagaacaggcggaaagagcgcaagatgggcgccaacctcttcaccatcggattc
gccatttatgaggtgccaaaggagatgcatggcaacaagcagcacatgcagaaggacttc
ttcctcttcaactcctccaaggcccgctgcaagtcctacatcaacctgcgcgaggtgacc
cagcgcttccgcctgagccccggggagtacgtcatcgtgccctccacgtacgagccgcac
caggagggcgagttcatcctgcgggtcttctccgagaagaagaacacctcagaggagata
gagaacaggatcgaggctgaccatccagtgccggcaccggcctcggcgggggaggagagc
gaggaggatcagcagttccggactatttttcaggagatagctggagatgacatggaaata
acagccaacgaactgaaaaacgttctcaacagagtgatcaccaaacataaggacctgaac
acagaaggcttcagcctggagagctgcaggagcatgattgctctgatggacatggacggg
accggtagactcaacctgcaggagttcagacatctgtggaataagatcaaacagtggcag
ggaatctttaaacattacaacgctgatcagtccggcagcatcaacagttacgagatgagg
aacgccgtcaacgacgcaggcttccgtctcaacaaccagctgtacgacatcatcaccatg
cgctacgccaacgagagcatgaacatcgacttcgacagcttcatcagctgcctggtgcgg
ctcgaggccatgttcagggcgtttcaggcctttgaccaggacggagatggaaccatcaga
ctcagtgtgctggagtggctccagttgaccatgtacgcctag
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