Hippoglossus stenolepis (Pacific halibut): 118117076
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Entry
118117076 CDS
T08308
Name
(RefSeq) tubulin alpha-1C chain isoform X1
KO
K07374
tubulin alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145
Phagosome
hsp04210
Apoptosis
hsp04530
Tight junction
hsp04540
Gap junction
hsp04814
Motor proteins
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118117076
09143 Cell growth and death
04210 Apoptosis
118117076
09144 Cellular community - eukaryotes
04530 Tight junction
118117076
04540 Gap junction
118117076
09142 Cell motility
04814 Motor proteins
118117076
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118117076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118117076
03036 Chromosome and associated proteins [BR:
hsp03036
]
118117076
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118117076
04147 Exosome [BR:
hsp04147
]
118117076
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118117076
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
118117076
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
118117076
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118117076
Exosomal proteins of other body fluids (saliva and urine)
118117076
Exosomal proteins of colorectal cancer cells
118117076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
118117076
NCBI-ProteinID:
XP_035025041
LinkDB
All DBs
Position
10:complement(11757087..11764946)
Genome browser
AA seq
452 aa
AA seq
DB search
MFERECISVHVGQGGVQIGNACWELYCLEHGIQPDGQMPSNKTIGGGDDSFSTFFSETGA
GKHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLV
LDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS
TAVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEHPSYTNLNRLMSQIVSSI
TASLRFDGALNVDLTEFQTNLVPYPRIHFPMVTYAPVISAEKAYHEQLTVSEITNACFEP
ANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVGINYQ
PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEF
SEAREDMAALEKDYEEVGADSLGEDDEEEGDY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcgcgagtgtatctccgtgcacgttggtcagggcggtgtccagattggcaat
gcctgctgggagctttactgcctggaacatgggatccagccggatggacaaatgcccagc
aacaagaccattggaggaggagatgactccttcagcaccttctttagtgagaccggagct
gggaagcacgtccccagagctgtttttgtcgacctggagcccactgtcatcgatgaagta
cgcactggaagctaccgccagctgttccaccctgagcagctgatcactggtaaagaggat
gctgccaacaactacgcccgtggacactacaccgttggcaaagagatcattgacctggtg
ctggacaggatccgcaaactggctgaccagtgcactggtcttcaaggcttcctggttttc
cacagcttcggaggtggcaccggctctggcttcacctcactgctgatggagcgtctgtcc
gtcgactacggtaagaagtccaagctggagttctccatctacccagccccccaggtgtcc
accgctgtggtggagccctacaatgccatcctgaccacccacaccaccctggagcactct
gactgtgccttcatggtagataacgaggccatctacgatatctgccgccggaacctcgat
atcgagcatccctcctacaccaacctgaacaggctgatgagtcagattgtgtcctccatc
actgcttccctccgtttcgatggtgccctcaatgttgatctgaccgagttccagaccaac
ttggtgccatatccccgtatccacttccctatggtcacctacgctcctgtcatctctgcc
gagaaggcctaccatgagcaattaacggtgtctgagatcacaaatgcctgcttcgagcca
gccaatcagatggtgaaatgtgaccctcgccacggtaaatacatggcctgctgcctcctg
taccgtggagatgtggtgcccaaagatgtcaacgctgccatcggcaccatcaagaccaaa
cgcaccatccagtttgtggactggtgccccactggtttcaaggtcggcatcaactaccag
ccgcccactgtggttcctggtggagacctggccaaggtccagagggctgtgtgcatgctg
agcaacaccaccgccatcgctgaggcctgggctcgccttgaccacaagtttgatctgatg
tacgccaagcgcgccttcgttcactggtatgtgggtgagggtatggaggagggagagttc
tctgaggccagagaggatatggcagctctggagaaagattacgaagaggtcggagctgat
agtttgggagaggatgatgaggaggaaggggattattaa
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