Hippoglossus stenolepis (Pacific halibut): 118117168
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Entry
118117168 CDS
T08308
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118117168
Ion channels [BR:
hsp04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
118117168
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_9
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
118117168
NCBI-ProteinID:
XP_035025091
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Position
11:9418873..9426674
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AA seq
851 aa
AA seq
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MFTLTEVASLNDIQPTYRILKPWWDVFMDYLGLVMLMLAIFAMTMQITKDQVACLPCLED
PDETPGAKPGSFAQQPGQETASTASTGAPVMSSNPYITKDLPDEVAHEIHVTQQHTAALK
ENYVNQPQPTGIKTNLDYQQYIFVNQICYHVALPWYSKYFPYLTLIHTLVLMVSSNFWFK
YPKTSSKIEHFVSILGRCFESPWTTKALSETACEDSEENKQRLTGTSSVPKQVSLEGKDE
SVTSSTPMLGVKFSADKPIGEVPSSMTILDKKDGEQAKALFEKVRKFRAHVEDSDFIYKL
YVAQTIVKTVKFILILSYTSTFMAKINFKHSCEPDIKQLTGYRMFFCTHNMAFMLNKLLI
SYMALILIYGMACLYSLFWVFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYD
QLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQLVSRNTQDQQELYLFMISGLPNAVF
DLTDLEVLKLELIPEVRFTAKVSQMTSLQELHLCHCPAKVEQTGFAFLRDHLRCLHVKFT
DVAEIPAWVYLLRSLRELNLIGNLSSENNKMIGLESMRDLRHLKTLCLKSNLSKMPTNIT
ELSPHLIKLVVHNDGTKLLVLNSLKKMTNLIELELHSCELERIPHAIFSLTNLQELDLKS
NNIRTIEEIISFQHIKRLTCLKLWHNKIITIPSSIVQVKSLESLHLSHNKLESLPPALFL
LPKLRHVDVSHNSISVLPPDVGLLHNLQHLAINSNKLEVLPKPLFRCTKLKVLCLGQNAL
TVLPETVGQLVQLTQLELRGNCLDRLPALLGNCRLLRKNGLVVEDHLFDTLPVEVKESIS
RETNVSFTSGL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgctcacggaggttgcgtccttgaatgacattcagccgacgtaccgcatccta
aagccatggtgggacgtcttcatggactacctgggactggtcatgctcatgcttgccata
ttcgccatgaccatgcagatcactaaggaccaggtggcgtgccttccttgtctggaggac
ccagacgagacgccaggagctaaacctggctcgttcgcccagcagcccggacaagaaaca
gcctcaactgcatccaccggggccccagtgatgtcatccaatccctatattaccaaggat
ttaccggacgaagtagcccacgagatccacgtcacacaacaacacactgcagcgttgaaa
gagaattatgtcaatcaacctcaaccaactggaatcaagaccaatctggactatcaacag
tatatcttcgtcaaccaaatatgttaccacgttgccttgccctggtactccaagtacttt
ccatacctcactctcatccacactcttgttctcatggtcagtagcaacttctggttcaaa
taccccaaaacaagctcgaagatcgagcattttgtttccattctaggcagatgctttgag
tctccctggacaaccaaggctttgtctgaaaccgcttgtgaggactctgaggagaacaag
cagaggctgaccggcacctcctcagtaccaaaacaggtatctttagaggggaaggacgag
agcgtcacctcgtccacccccatgcttggggtgaagttttccgcagataagcccataggg
gaggtccctagtagtatgacaatcctggacaaaaaagatggggagcaggccaaagcctta
tttgagaaagtgagaaaattcagagctcacgtggaggacagcgatttcatctacaagctt
tatgtagcacagaccattgtcaaaactgtcaagtttattttgatattgtcctacacttca
acctttatggctaagatcaattttaagcacagttgtgagcctgatatcaaacagctcaca
ggatacagaatgttcttctgtacacacaacatggcgttcatgctgaacaagctgctgatc
agctacatggctttgattttgatatatggcatggcgtgcttgtactcactcttctgggtg
tttcggcgacccctgaaagagtactcgttcgagaaggtcagggaggagagcagctttagt
gacattcctgatgtcaagaacgactttgcattcctcttacacatggttgaccagtatgac
caactctactccaagcgcttcggtgtcttcttgtctgaagtcagtgaaaacaagctgagg
gagatcagcctcaatcatgagtggacctttgaaaagttgaggcagcttgtgagccgtaac
acacaggaccagcaggagctgtaccttttcatgatctccggactccccaacgcggtgttt
gacctcaccgacttggaggttcttaaactggagctgattcctgaggtgcggttcacggca
aaagtctctcagatgaccagcctgcaggagctgcatctctgccactgtcccgccaaagta
gagcagacaggcttcgctttcctccgcgaccatcttcgctgccttcacgtcaagttcacc
gatgttgcagagatcccagcttgggtgtatctgctaaggagtttgagggagctaaacctc
atcggcaacttgagctcggaaaataataaaatgatcggtcttgagtccatgcgagatttg
aggcatttaaagacattatgcctgaagagcaacctctctaaaatgcccacaaacatcaca
gagctttcgccacacttaattaaattagtcgtgcacaacgatggtacgaaactgcttgta
ctcaatagtctgaaaaagatgacaaatctgattgaactggagctgcacagctgcgaacta
gagaggattccccacgctattttcagcctgaccaacttgcaggagcttgacctgaagtct
aacaacatccgcaccattgaggagatcatcagcttccagcacatcaagaggctgacgtgc
ctgaaactgtggcacaacaaaataatcaccatcccatcctcaatcgtgcaggtcaaatcc
ctggagtctctccacctctcgcacaataagctggagtctttgcctccggccttgttctta
ctacccaaactgcggcacgtggatgtcagccacaactccatctcggtgctgcctccagat
gtcggcctcctccacaacctccagcacctggccatcaactccaacaagctggaggtgctg
cccaagcctctgttcaggtgcaccaagctaaaggtgctatgtctggggcaaaacgcgctc
accgtgctgccggagactgtgggtcagctggtgcagctcacgcagctggagctcagaggg
aactgtctggacaggctgcccgccctgctcggaaactgccgcctgctgcgcaaaaacggc
ctggttgtggaggaccacctctttgacacactgcctgtggaagtcaaggagagcatcagc
cgagagaccaacgtgtccttcacgagcggcttatag
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