Hippoglossus stenolepis (Pacific halibut): 118117169
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Entry
118117169 CDS
T08308
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118117169 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118117169 (rpap2)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
118117169 (rpap2)
Protein phosphatases and associated proteins [BR:
hsp01009
]
HAD phosphatases
Fcp/Scp phosphatases
118117169 (rpap2)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118117169 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
118117169
NCBI-ProteinID:
XP_035025092
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Position
11:9476672..9500519
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AA seq
666 aa
AA seq
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METEQRRKAHKTSKNGGKREKAMTVEEEARRREVVTEKLRQRLDLEQRALKVVERLLDDS
VAEDFLVDCAKFITSANYKDAIEERGIAKLCGYPICPNKLGKIPTQQYKICTKTNKVYDI
TERKCYCSNFCYKASKEFELQISNTPLWLRQHESDQEIKLLKKGDGGSSGEVVILSDRRL
QEEDVENLLTAEPGQPDSSQQGGAAGAHSDTSDVEQEQDFVSSVVSQRHGRRVHWGALPK
RTDEDEEGKRGKMERREKQSREGDKEEIEHPQSQKAEKGTIKEDEQGKESHALKTENRTD
AEKLHARNTDPAEEEDSPKEPSVEEVTAKIDLCSLSEGVTHTVSLCVDSTPAQAEPVTLL
ISPPLTDSQPPAGNKPLSSSTLTSHSTTLPPQRGLGITQVGMSKKGAAGLRDLLKNHTAA
PKPDSARLNLLECLRRTLKEWSTDETLKFLYGADHSKGSPFADLKSEKDDGEEELDEDDI
EDEIPVEVVEVADAAAALYYKNLREESQQLELRVKEFYKGMWPEGIEAPNDNKVTVQDQD
TTDPALPLVDSQAQHLIQKQIAVEKLTNCLRNIVGPLHLTMSDVSADLNNLVKTFRFSNT
NIIHKTPEWTLIAVMLLHLLSDVSLVVREAFEMTASAAYLNTMMEELGLQQQDLLNLVRL
FKTPAH
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagcagaggaggaaagctcacaaaacctccaaaaatggtgggaaacgcgag
aaagcgatgactgttgaagaagaagcaagaaggagggaggtagtgacggagaagctgagg
cagaggctggatctggagcaaagagccctgaaggtggtggagcgtctccttgacgacagt
gtggctgaagacttcctggttgactgtgccaaattcatcacttcagctaattacaaagac
gctatcgaggagagagggattgctaaactgtgtggttatcccatatgtccaaataaactg
ggcaagatcccaactcaacagtataaaatttgtactaagaccaataaagtgtacgacatt
acagagcgcaagtgttattgcagtaacttctgttacaaagcctccaaggagtttgaacta
caaatatcaaacactcctctttggctcaggcagcatgagagcgatcaagaaattaaactg
ctgaagaaaggagatggtgggagctctggagaggtggtgattctgtcagacaggcgtctc
caagaggaggacgttgagaatctgctgaccgctgagcccgggcagcctgacagctcccaa
caaggtggtgctgcaggtgcccacagcgacaccagtgacgtggaacaagaacaggacttt
gtctccagcgttgtgtcgcagcggcacggtcgcagggtgcactggggtgccctgcctaaa
cgcacagatgaagatgaggaaggaaaacgagggaagatggagaggagagagaaacagagc
agagagggggataaggaggagatcgagcatcctcaaagtcagaaagcagagaagggaaca
attaaagaagatgagcaaggaaaagagtctcatgcactgaaaacagagaatagaactgat
gcagaaaagctgcatgcaagaaatactgacccggcagaggaagaagactcgccaaaggaa
cccagtgtggaagaggttacagctaagattgatctgtgcagtttgtctgaaggagtcact
cacactgtttccctgtgtgtggactcaacacctgcacaggcagaacctgtaacactgctc
atctctcctccacttactgactctcaacccccggcaggaaacaaacccctctcctcttca
acactaaccagccacagcacaacattgcccccccagcgaggactcggcatcacccaggtg
ggtatgagtaagaaaggggcagcggggttacgagatctactcaagaaccacacggctgca
cccaaacccgactccgcccggctgaatctcctcgagtgtttgagaagaaccttgaaggaa
tggagcacggacgagaccttgaaattcctgtacggtgctgaccattcaaaaggctctcct
ttcgctgatctaaaaagtgagaaggatgacggagaggaggagctggatgaagatgacatt
gaggatgagattcctgtagaggttgttgaagtggctgatgcagcagcagctctatactat
aagaacctgagggaggagagccagcagctggagctcagagtaaaggagttttataaaggg
atgtggcctgaggggatagaggcgccaaatgacaacaaggtgacagtccaggaccaggac
acaacagacccagctctgccacttgttgactctcaagctcagcacctcatccagaaacaa
atcgcagtggagaagctcaccaattgtctcagaaacattgtgggtccgctgcatctcacc
atgagtgacgtctctgctgacctgaacaacctggtcaagacgttcaggttcagcaacaca
aacatcatccacaaaactccagagtggaccctcattgctgtgatgcttctacatctgttg
tcagatgtgtctctggtggtgagagaggcctttgagatgacggcatcagcggcgtatttg
aacacgatgatggaagagctcggtctccaacagcaggatctgttgaacttagtccggctg
tttaaaaccccagcacactga
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