Hippoglossus stenolepis (Pacific halibut): 118117206
Help
Entry
118117206 CDS
T08308
Name
(RefSeq) double-stranded RNA-specific editase B2
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118117206
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118117206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
118117206
NCBI-ProteinID:
XP_035025149
LinkDB
All DBs
Position
11:complement(23693895..23713813)
Genome browser
AA seq
737 aa
AA seq
DB search
MERSDPHVKGKSKRKRRRRRSKGKERGDRISTLISPMRHWETGASSAEDADNSSTSSLEV
KENQDDKIQLDCDRLRKYHPSAFCTTFPRTRARATKRKQPLVDGKDRLLYQSHLTCKRAA
WAVTQKNALVQLNELRPGLRYEVASKTGPLHAPVFSVGVEVNGLRFEGRGPTKKQAKMRA
AELALRSFIQFPNASQAHSVMENFTGTPTDFTADKLDIPDGFLQESEPSLFEDLLHGNTA
KKEVFSSIYNHKRLVHLTLDLVSSTNPKRRALCTSLLEHLSPVALLSELQPGLRYMCLVE
RVHGRLMRSFVMVVRVGGRVFEGCGHSKRRAKAQAAAAALQSLYNISLGPEKKVMGLQSS
RTKNQLPQFFAESIFHLVREKHGELTFGCFSTSHARHKVLAGIVMTRGFDLRSAHVVSLA
TGTKCLDNASDRDSTLGDCHAEVLSRRALVRFLYSQLELLLCNPADGEEQSIFVPNKGGG
LRLQDGVFFHMYVSSSPCGDARLNCPYETSAAYPSRRCRSHLRVKVNGGEGTLPVTARGA
NQKQDALSPGERLVTMSCTDKMAKWSVVGLQGALLSHLVEPVYLHSLTVGTLSHTGHLGR
ALTRRLAAVKHLPFPYRRRQPLLSCLSEARPAGKAPSVSLSWSCGDGGLEEICTSTGRRP
DSGTPSQLCRSSLFDRWQGLQRQISGAGATNGTYTGSKLSAGRYQRALQQFTGALQGGGL
GTWLRKSPPLGRLPVSM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtcagacccccacgtgaagggaaagtccaagaggaagaggaggaggaggagg
agtaaaggcaaagaacgaggcgacagaatatccaccctcatcagtcccatgcgacattgg
gagactggagcttcttcagctgaggacgcagacaactcaagtacaagcagtttggaggtg
aaagagaatcaggatgataaaatccagctggactgtgatcgactgcgaaagtatcatccg
tcagcgttttgcacaactttccccagaaccagagcgagggccacgaagaggaagcagccg
ctggtggatggaaaagaccggctgctctaccaaagccacttgacctgtaaacgagccgcg
tgggccgtcactcagaagaacgcgctggtgcagctgaacgagctacgacccgggctgcgc
tatgaggtcgcgtcaaagacgggtcctctgcatgctccggtgttttctgtcggcgtggag
gtcaacggcctccgctttgagggtcgagggccgaccaagaagcaggcgaagatgagggcc
gcggagctcgctctccggtccttcatccagttcccaaatgcctcccaggctcacagcgtg
atggagaacttcaccggcacacccacggattttacagcagataaactggacatccccgat
ggattcctccaggagtctgagccatccctgtttgaagatctcctgcatggcaacacagca
aaaaaggaggttttctccagcatttacaaccacaaacgacttgttcatctcacactggac
ttggtctcctcaacaaaccccaaaagacgagccctctgcacctcactgttagagcacctc
agcccagtggcgctgctcagcgagctgcagccagggctcaggtacatgtgtctggtggag
agagttcacggcagactgatgaggagcttcgtcatggttgttcgggtgggggggagggtg
tttgaagggtgtggtcacagtaaaagacgggcgaaggcgcaggcggcggcagctgctcta
cagtctctgtacaacatcagcctgggaccagagaagaaggtcatgggcctccagagcagc
agaaccaaaaaccagctacctcagttcttcgcggagtccatcttccacctggtgagagag
aaacacggcgagttgacgttcggctgtttctccacctcgcacgctcgccacaaggtgctg
gcggggatcgtgatgaccagaggctttgacctcagatcggcccacgttgtgtctctggcc
acggggacgaagtgtctggacaacgcgagcgaccgcgactccacgctcggcgactgtcac
gctgaagttctcagcagaagagcgctggttcgattcctgtactctcagctggagctgctg
ctctgtaatccggcagacggcgaggaacaatccatctttgtgccaaacaaaggcggcggc
ttacggctgcaggacggcgtcttcttccacatgtacgtcagctcgtcaccgtgtggagac
gctcgactcaactgcccctacgagaccagtgctgcctatcccagccggaggtgtcgctct
cacctcagggtgaaggtcaacgggggggagggcacgctgcctgtcacggcacgaggagcc
aatcagaaacaggacgctctgtcgccgggggaacgtctggtcaccatgtcctgcaccgac
aaaatggcaaagtggagcgtcgtcggactccagggggcgctcctgtcccacctggtggag
ccggtttacctgcacagcctgacagtggggacgctgagccacacgggtcacctgggccga
gccctgacacggcgcctcgcagccgtcaagcacctgcccttcccctaccgccgccggcag
ccgctgctcagctgtctgagcgaggcgcggccggccgggaaggccccgagcgtcagcctg
agctggagctgtggtgacggaggcctggaggagatctgcacctccacgggaaggaggccg
gactccgggacgccatcgcagctctgcaggagctcgctgtttgaccgctggcaggggctg
cagcgtcagatatcgggcgcaggagccacaaacgggacgtacaccggctccaaactgagc
gccggccgctaccagagggcgctgcagcagttcactggcgctctgcagggcggcggcctc
ggaacgtggctccggaaatctccaccgctgggccggttgcccgtcagcatgtga
DBGET
integrated database retrieval system
