Hippoglossus stenolepis (Pacific halibut): 118117295
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Entry
118117295 CDS
T08308
Name
(RefSeq) CPD photolyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118117295
Enzymes [BR:
hsp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
118117295
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
118117295
Prokaryotic type
118117295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
118117295
NCBI-ProteinID:
XP_035025301
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All DBs
Position
11:8734467..8740046
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AA seq
555 aa
AA seq
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MFCIWRSSPSAQRRPLTLTYQRSPRPLLSLFTGSFSSVSTMSDKKRKAAPASKERSAKQK
KLAPTKQQQEKQQEKQQRTGGWLQDLIMQQRSEEKEIKFNKKRLRILSDAEKMKQGSEGV
LYWMSRDQRVQDNWALIHAQKLAVKKNLPLHVCFCWFVPKSELSTLRRYSFMLKGLKEVA
EECKALDIQFHLLHGSAGDVLPGFVSDHSLGAVVTDFYPLREPLQWLEDVKEKLPEDILL
KQVDAHNIVPCWVASPKQEYAARTIRGKITKLLPDFLTDFPPVEKHPVPATRTAKPIEWE
KTLASLPVDREVEVPEWAKPGTKAGMAMLESFIDVRLKLFENKRNDPNVSALSQLSPWIR
FGHISAQRVALQVQSSGQKAGQTVASFIEELVVRRELTDNYCYYNKKYDSVEGAYEWAQK
TLKDHAKDKRPYLYTREQLEKAKTHDKLWNGAQYQLITEGKMHGFLRMYWAKKILEWTSS
PEEALSIALYLNDRYSLDGQDPNGFVGCMWSICGIHDQGWAERPIFGKIRYMNYKGCTRK
FDVPQFERKYCPKNL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcatctggaggagctctccctctgcacaaaggcgacccctgacgctcacctac
cagagatcaccaaggccacttctctccctcttcaccggttcgttctccagtgtttccacc
atgtcagataagaaacgcaaggctgctcccgccagtaaagagcgctccgccaagcagaag
aagctggcccccacgaagcagcagcaggagaagcagcaggagaagcagcagaggactggg
ggctggctgcaggacctgatcatgcagcagaggtcagaggagaaggagataaagttcaac
aagaagcgtcttcgaattctatctgacgctgagaagatgaagcagggctcagagggagtc
ctgtactggatgtcgagagaccagagagtacaagataactgggctctgatccacgcacag
aaactcgctgtgaagaaaaaccttcctctgcacgtctgcttctgctggtttgtcccaaag
tcagaactgtctactctgagacgttacagcttcatgctcaaaggactgaaagaagtcgca
gaggaatgtaaagccttagacatccagttccacttactccatggatcagcaggggacgtt
ctccccggctttgtgtctgaccacagcctgggggcagtggtgacagacttctaccctctc
agagaacctctgcagtggttagaggacgtcaaagagaagcttccagaggacatcctcctc
aaacaggtggacgcccataacattgttccctgctgggtagcgtcacctaaacaggaatac
gccgccagaacgatcagaggaaaaatcaccaaacttctgccggacttcctcactgatttt
cctccggtagagaaacaccccgtccctgctacaagaactgctaaaccaatagagtgggag
aaaactctggcctcgctgccggttgacagagaggtcgaggtgccggagtgggccaagcct
ggcaccaaggcggggatggccatgttggagtccttcattgatgtacgcctcaaactgttt
gaaaacaaacgcaacgacccaaatgtcagcgccctcagccagctctccccctggatccgc
ttcggccacatctcagctcagcgcgtggcgttgcaggttcagagcagtgggcaaaaggcc
ggtcagaccgtcgcctccttcatcgaggagctggtggtgcgtagggagctgacggacaac
tactgctactacaacaagaaatacgacagcgtggagggtgcatatgaatgggctcagaag
accttgaaggaccacgccaaagacaagaggccttatctctacacacgggagcagctggag
aaagcaaagacgcacgacaaactctggaatggagctcagtaccagctgatcactgaaggg
aagatgcatggtttcttgaggatgtactgggccaaaaagattctggagtggacatcgtca
ccagaggaggcgctctccatcgccctttatctaaatgatcgctattcgctggatggccag
gaccccaatggttttgttgggtgtatgtggtctatctgtggcatccacgaccagggctgg
gcagagagacctattttcggaaagatccgctacatgaactacaaaggctgcaccaggaag
tttgacgtcccccagtttgagcgaaagtactgtcccaaaaacctgtga
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