Hippoglossus stenolepis (Pacific halibut): 118117450
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Entry
118117450 CDS
T08308
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X2
KO
K09273
upstream-binding transcription factor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118117450 (ubtfl)
03021 Transcription machinery [BR:
hsp03021
]
118117450 (ubtfl)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
118117450 (ubtfl)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
118117450 (ubtfl)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
DUF4872
HMG_WDHD1
Poxvirus_B22R_N
Motif
Other DBs
NCBI-GeneID:
118117450
NCBI-ProteinID:
XP_035025557
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All DBs
Position
11:25121960..25133937
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AA seq
776 aa
AA seq
DB search
MFSPGVPPPAALGGVSYRTRRSFCRIRFDLTPRGLRLKNTHFESPEIILTSTVVCSVNPG
FCLNRKEGGACCMMNGSSSSVSASQSSRVKSEQGADDWSKEDCLTLLERIRSLLPDVDSM
KYKTTESHFDWEKVCFGSFTGDMCRQKWQKVSTEVRKYRTMTELIVDAIEFVKNPYKGKK
LKTHPDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITE
FQREKEEFEKNMARFKEEHPELMEERKKSDLPEKPKTPQQLWYNHEKKTYMKLHPEVSQK
ELKEALRRQWSQLSDKRRLKWISKALELQKDYEDSMRAYHEAHPDVNSDDHVRSVLTKAE
RQLKDKFDGRPTKPPPNGYSLYCAELMVNMKDVPSTERMVLCSKQWKIMTQKEKDMFQKR
CEQKKKQYDVDLKRFLESLPEEERDRVLTEEKLGGGRLSVGVASSPRRAKSPSLKGRCRE
VEPESWVPARPPKERRDGKKTAKLPETPKTAEEMWQHSVIGDYLAKYRSDRRKAQAAMEA
TWKSMEKKEKIPWIKRAAEDQKRYEVQYQHVRELLEMRAPAAGPTQRKPKFDGEPKKPPV
SGYQMFSQELLTNGELNHFSLKERMVEIGKRWHTLSQSQKDKYKKQVEEQQVEYKAELEA
WVQSLSPQEQAVYKEFSSSKRRSTTKARSSPGAKVHVMAKGKAVGSRAATPGVSVGKRAM
AYRAKQDMSDTDDEEEKSSSDSDEDDETSGTTDSDDENDDDEDQTSSEESSDSDSD
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgttttcccccggagttcctccccctgcggcgctgggcggagtttcataccggactaga
cgctccttttgtcggattcgtttcgacctgactccccggggtttacggctgaaaaataca
cactttgaaagtcctgaaataatcctaacgagcaccgtggtgtgcagcgtgaacccgggt
ttctgtctgaaccggaaggagggaggagcctgctgcatgatgaacggcagcagcagcagc
gtatctgcgtctcagagctccagggtcaaaagtgaacaaggtgcagatgactggagtaag
gaggactgtctcactctgctggagaggatccgcagtctgctgccggacgtagactccatg
aagtataaaaccacagagtcgcactttgactgggagaaagtttgtttcggcagcttcacc
ggagacatgtgtcgccagaagtggcagaaagtgtcgactgaggttcgtaagtacaggacg
atgacagagctcatcgtggacgccatcgagtttgtgaagaatccgtacaaaggaaagaaa
ctgaagactcacccagatttccctaaaaaacctctgactccctactttcgcttcttcatg
gagaaacgagcaaaatatgcaaaaatccacccggagatgagcaacttggatctcaccaag
attctctccaagaaatacaaagagctgcccgacaagaagaagcaaaaatacatcacagag
tttcaacgagagaaagaagagtttgagaagaacatggctcgattcaaggaggagcatccg
gagctgatggaggagaggaagaagtccgatctgccggagaaaccgaaaactccacaacag
ctgtggtacaaccacgagaagaagacgtacatgaagctgcatccagaggttagtcaaaag
gagctgaaggaggcgctgaggagacagtggtcacagctctccgacaagagacgactgaag
tggatcagcaaggccctggagctgcagaaggactacgaggacagtatgagagcatatcat
gaagctcatccagatgtgaactcagatgatcacgttcgttccgtcctcaccaaagcagag
cgacaactgaaggacaagttcgatggaagaccgacaaaaccaccacctaatggctactct
ctgtactgtgcggagctgatggtgaacatgaaggatgtccccagcaccgagcgcatggtt
ctctgcagtaaacagtggaaaattatgacgcaaaaagagaaagatatgttccagaaacgc
tgcgagcagaaaaagaagcagtacgacgtcgacctgaagaggtttctggagagtctgcca
gaagaggaacgagaccgtgtcctaacagaggagaaactgggcgggggcagattgagtgtg
ggtgtggcttccagccctcgccgagccaagtctccatctctcaagggtcggtgtcgggag
gtggagccagaatcatgggtacctgccagaccgccaaaagaaagacgggacgggaagaag
acggcgaagcttccagagacaccaaaaacagcggaagaaatgtggcagcacagcgtgatc
ggagattatttagcaaaatacagaagcgaccgcaggaaggcgcaggcggcgatggaggca
acttggaagtcgatggagaagaaggagaaaattccgtggatcaagagggcggcggaggac
cagaagcgttatgaggttcagtaccaacatgtgagggagctgttggagatgagggctcca
gccgcaggtccgactcagaggaaacccaagtttgacggagaaccaaagaaacctccagtg
agcgggtatcagatgttctcccaggagctgctgaccaatggcgagctgaaccacttcagt
ctgaaggagcggatggtggagatcgggaagcgatggcacacactgagtcagagtcagaaa
gacaagtacaagaagcaggtggaggagcagcaggtggagtacaaggccgagctggaggcc
tgggtccagtctctctctcctcaggagcaagccgtctacaaggagttctcttcctctaaa
cgtcgcagcaccactaaagcgcgcagcagccccggagctaaagtccatgtgatggcgaaa
gggaaggcggtcggttcaagagccgcaacaccgggggtcagcgtgggcaagagggccatg
gcgtaccgagctaagcaggacatgtccgacaccgacgacgaggaggagaaaagttcgtct
gactccgatgaagacgacgagacgtcaggaaccacggacagcgacgatgagaatgacgac
gatgaagatcaaacgtcctcggaggaatccagtgactctgactcagactag
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