Hippoglossus stenolepis (Pacific halibut): 118117457
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Entry
118117457 CDS
T08308
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118117457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118117457
03036 Chromosome and associated proteins [BR:
hsp03036
]
118117457
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118117457
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118117457
PBAF complex
118117457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
HMG_WDHD1
Pcf11_helical
CxxCxxCC
Motif
Other DBs
NCBI-GeneID:
118117457
NCBI-ProteinID:
XP_035025608
LinkDB
All DBs
Position
2:3631731..3640233
Genome browser
AA seq
427 aa
AA seq
DB search
MSKRPSHAPPPPPAPSTQMPNTAGFVGYNPYSHLAYNNYRLGGSQSSNSRVTNSSGINIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYE
AEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPADDPD
DYDDGFSIKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFIEATESFTNELKRLCCMKVEVDMEKISAEISAAEEAARKRM
AERDRDAGDRGAREAPTCVLAEEEKHICATHGNKPQQNPPIESSSKEGEDTESNPTDAPV
KPKASEELEAHPGSEEGASEDKESVPEGAIEEGTSDSNTGSETTSAQTEDAPTSEPSEGP
SKARAAH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaccgtcacatgcccctccccctccccctgccccttcaactcaaatgccc
aacactgccgggtttgtggggtacaacccatacagccatctggcctacaacaactacaga
ctgggagggagccaaagcagcaacagtcgggtaacgaattcttctggaataaatatccca
aaaccaccaaagccacctgataagccattgatgccatatatgagatatagtcgtaaggtt
tgggatcaagtaaaagcctccaatcctgatctgaagctatgggaaattgggaagataatc
ggtggcatgtggagggacctcactgatgaggagaaacaggattatttgaatgactacgaa
gcagagaagattgagtataatgaaagcatgaaggcctatcacaactcgccagcgtacctg
gcctatgtcaatgcaaagagccgtgctgaggcagctctggaagaggagagccgtcagagg
cagtccagactggacaagggcgaaccttacatgagtattcaaccagcagacgatccagat
gattacgatgacggattttccataaagcactcagctgcagctcgtttccaacgcaaccat
cgtctgatcagcgagattctcagtgagagtgtagtcccagatgtgcgatcagttgttact
acggctcgcatgcaggtccttaaacgccaggtccagtctttgatggtacaccagagaaag
ctggaggccgagttgcttcagattgaagaccgccaccaggacaagaaaagaaaattcatc
gaagccacagagtcattcacaaatgagctcaaaaggctgtgctgtatgaaggtggaagtg
gacatggagaagatttctgcagagatttctgcagcagaggaggcagctcgtaaacggatg
gcagaacgtgatagggatgcaggggaccgcggtgcgagagaggcccccacctgtgtctta
gcagaagaagaaaaacacatttgtgcaacacatggcaacaagccccagcaaaatcctccc
attgaaagtagcagcaaggaaggtgaggacacggagtccaaccccacagacgcaccagtg
aagccgaaggcctcagaggagcttgaggctcatccaggcagcgaggaaggggcgtcagag
gacaaggagagcgtcccagagggagccattgaggaaggaaccagtgacagtaacactggc
tcagagaccacctctgctcagacagaagatgccccgaccagtgagccatcagaggggccc
agcaaggcgagagcagcccactga
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integrated database retrieval system
