Hippoglossus stenolepis (Pacific halibut): 118117458
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Entry
118117458 CDS
T08308
Symbol
riok1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118117458 (riok1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsp01001
]
118117458 (riok1)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118117458 (riok1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118117458 (riok1)
Protein kinases [BR:
hsp01001
]
Serine/threonine kinases: Other
RIO family [OT]
118117458 (riok1)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-40S particles
Kinases
118117458 (riok1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
118117458
NCBI-ProteinID:
XP_035025577
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All DBs
Position
11:complement(25200958..25207542)
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AA seq
560 aa
AA seq
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MSVKCDVMSAVGCVPGQFDDAEEKSNQSEVSAVRSEVSDVALQPPHQQEEEEEEEEDYDD
DDDDDEDEEWAWHSAGGNLTKRYNRMTLNCQSNRQNPSNKMLPSSTPSDKALRKYEHKIN
LDKLNYADSVINKVTMMQKQKDADTYRVKDKSDRATVEQVLDPRTRMILFKMLSRGAICE
ISGCISTGKEANVYHASTSAGERRAIKIYKTSILLFKDRDKYVSGEFRFRHGYCKGNPRK
MVRTWAEKEMRNLIRLQTARIPSPEPLLLRSHVLLMSFIGKDDMPAPLLKNASFSESKAR
ELYLQVLQNMRKMFQEARLVHADLSEFNMLYHNGDAYIIDVSQSVEHDHPHALEFLRKDC
SNVNDFFVKHGVAVMTVRELFDFITDLSITCHNIDQYLEKAMVIAAERTSQQRSDQDRVD
EEVFKNTYIPRTLTEVSHYERDIELMRAKEEESVISHHDNILYQTLTGLKKDLSGVQTVP
ALLEDKHSSSSSSSSDEDDDDDEEEEGRETAGQEQNEETSMDKKEKKKKVKEAQREKRKN
KVPKHVKKRKEKVTKMKKSR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttaagtgtgacgtcatgtcggcggtcgggtgtgtacctggacagtttgatgac
gcagaggagaagagcaaccaatcagaggtgtctgctgtacggtctgaggtcagtgatgtc
gctctgcagccgccacatcaacaggaggaggaggaggaggaggaggaggactatgatgat
gatgatgatgatgatgaagatgaagagtgggcatggcattcagcaggaggaaatctgacc
aagagatacaacaggatgactctcaactgtcagtccaacagacagaatccgtccaataag
atgctgccgtcgtcaacgccttcagataaagctctaaggaaatacgagcacaagatcaac
ctggataaactgaactatgcagactctgtgatcaataaagtgacgatgatgcagaaacag
aaagacgctgatacgtacagagtgaaggacaaatcagatcgagccacagtcgaacaggtt
ttagatcctcggactcgaatgattctgtttaagatgttgagtcgtggagcaatctgtgaa
atcagcggctgcatcagcaccgggaaggaggcgaacgtttatcacgccagcacgtcggcc
ggagaacgccgcgccatcaagatctacaagacgtccatcctgctgttcaaagaccgagac
aaatacgtcagtggagagtttaggttccgtcacggttactgcaaagggaaccccaggaag
atggtgaggacctgggcagagaaggagatgaggaacctcatcaggctgcagacggcaaga
atcccgagtccagaacctctgctgctcagaagtcacgttctgctgatgagcttcattgga
aaagacgacatgccagctcctctgctgaagaatgcatcgttttcggagtcgaaggctcgt
gagctctacctgcaggttctacagaacatgaggaaaatgtttcaagaagctcgactcgtc
cacgccgacctcagcgagttcaacatgctttatcacaacggagacgcttacatcatcgac
gtgtcgcagtcggtagaacacgatcatcctcatgctctggagttcctcaggaaggactgc
agcaacgtgaacgatttctttgtgaagcacggtgtggcggtgatgacggtcagagagctg
tttgacttcatcacagacctgtccatcacctgtcacaacatcgatcaatacctggagaag
gcgatggtgattgcagctgaacggacgtcgcaacagcgatcagatcaggatcgagtggac
gaggaggtgtttaagaacacctacatcccccgcacgctgacagaggtgagtcactacgag
cgagacatcgaactgatgagggcgaaggaggaagagtcggtcatcagccatcatgacaac
atcttgtatcagactctcactggactgaagaaagatctgtcaggagttcagacggttcct
gctctcctggaggacaagcattcatcatcctcctcctcctcctcggatgaggatgatgat
gatgatgaggaggaggaggggagggagacagctggccaggagcagaacgaggaaacttcg
atggacaaaaaggagaagaagaagaaggtgaaagaagctcagagagaaaaaagaaaaaac
aaggtcccaaaacacgtgaagaagaggaaggagaaggtcaccaagatgaagaagagcaga
tga
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