Hippoglossus stenolepis (Pacific halibut): 118117463
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Entry
118117463 CDS
T08308
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63-like isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118117463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118117463
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118117463
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
MTCP1
zf-Nse
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
118117463
NCBI-ProteinID:
XP_035025585
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Position
11:complement(25074825..25079249)
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AA seq
456 aa
AA seq
DB search
MESLEKQLICPICLETFTKPVVILPCQHNLCRKCANDVFQASNPYLSTRSGSTVTSGGRF
RCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQDSSSKPSSVVKVDQPMCVDHEDERIN
IYCVSCSAPTCSLCKVFGAHKECEVAPLDTVFTAQKAELTDCISMLVGNNERIQAIIGHL
EETCGAVYENGSRQKSKLCETFDHLFALLEEKKGEMTLRISSEQEDRVDNIRGLRRKYSE
HMDAAAQLLENAIQTLDESEMVVFLQTSKPLLQKIVEGTNTSHLDKLQHGYDNMEHFTAN
FKLQRQALSGIAFIRADEDDEDDEIRVTSPGSRAELQPPAAPAAPAAPAAPAPAAPAAPA
APAAPAAPAAPAAPAAPAAPAAPAAPAHQQHQQPTSSLLFHLHSSQPPPLRDPQRPHPRS
RHIQETPPLRLPVRPRPIYPRPLPAPPPRLSLIRTS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggagagtctggagaagcagctcatctgtcccatctgtctggagacgttcaccaagccg
gtggtcatcctgccctgccaacacaacctctgtcgcaagtgtgccaatgacgtcttccag
gcgtccaatccctacctgtcgacgaggagcggctcgacagtgacatcaggaggtcgtttc
cgctgcccgtcctgtcgccatgaggtggtcctggaccgacacggtgtttatggactgcag
aggaacctgctggtggagaacatcatcgacatgtacaaacaggacagcagcagtaaaccg
tcctctgtggtgaaggtcgatcagccgatgtgtgttgatcacgaggatgaaagaatcaac
atttactgtgtgagctgcagcgcccccacctgttcactgtgtaaagtgttcggagcgcac
aaagagtgtgaggtggctccacttgacaccgtcttcactgcacaaaaggcggagttgact
gactgtatctccatgctcgttgggaataacgagaggattcaggcgatcatcggtcacctg
gaggaaacctgtggagctgtttatgagaacggcagcagacagaagtcgaagttgtgcgaa
acatttgatcacctgttcgctctcctggaggagaagaaaggtgagatgactctgaggatc
agctctgaacaggaagatagagtcgacaacatccgaggtctgaggaggaagtacagcgag
cacatggacgctgccgcgcagctgctggagaacgccatccagacgctggacgagtctgag
atggtcgtgttcctgcagacgtccaaacctctgctgcagaagatcgtggagggaaccaac
acgtctcacctggataaactccaacacggatacgacaacatggaacacttcactgctaac
tttaaacttcagagacaagcactgagcggcattgccttcatccgagctgatgaggacgat
gaagatgatgagatcagagtgacgtcaccagggagtcgagctgagttgcagccacctgca
gcaccagcagcaccagcagcacctgcagcacctgcaccagcagcaccagcagcaccagca
gcacctgcagcaccagcagcacctgcagcacctgcagcaccagcagcacctgcagcacca
gcagcaccagcagcacctgcgcaccagcagcaccagcagccaaccagcagcctcctcttt
cacctgcacagctctcagcccccacccctcagagaccctcagagaccacacccacgatca
cgtcacatacaagaaaccccaccccttcgtcttccagtcagaccacgccccatctacccc
cgcccactgccagccccacccccaaggttgagtctgatcagaacgagttga
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