Hippoglossus stenolepis (Pacific halibut): 118117471
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Entry
118117471 CDS
T08308
Symbol
rpp40
Name
(RefSeq) ribonuclease P protein subunit p40 isoform X1
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118117471 (rpp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118117471 (rpp40)
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118117471 (rpp40)
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118117471 (rpp40)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
118117471 (rpp40)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
118117471 (rpp40)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
118117471 (rpp40)
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
118117471 (rpp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
118117471
NCBI-ProteinID:
XP_035025604
LinkDB
All DBs
Position
11:25207037..25212216
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AA seq
359 aa
AA seq
DB search
MSVDVSNAPRSVLVCDRSSFLDEKNRISSQLQQLHFNYKVSLLLPECSSAPSHLDSVLKS
FNSFYLIRDMPICELLDKHFLETAVYQGSVSGLSYRTRIDEDNCVALMPNGRLCLSLDKH
SFQVLGVEGKPSKFNHRTKNRFVVSVDLTDSSMAPGGRGYVRLLTGLRSRLHLRTDFLLS
HHPAVCPAGGGASLQHLLSRYDWSEHRPEISSRVLTHLSCPPLLSSDPQPGDAHSFLEWL
GAVDADISCENSSNSFMSSLVCPAPKTMLSRALSVSVCGLLLPQDVHRLVQELRCHLEQP
RLAPWASLTVHGFVDSPVSWGDGEHGVLIGGENFYNLLMFHDHTYHLHLATGAHDTCPQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggatgtgtctaacgctccgcggtctgtgctggtctgtgatcgatcctctttc
ctggatgagaaaaaccggatcagttctcagctgcagcagctgcacttcaactacaaggtg
tccttgctgctgcctgagtgtagctccgccccctctcacctggactctgtgttaaaaagc
ttcaacagtttctacctaatcagggacatgcccatatgtgaactgctggacaaacacttc
ctggagacggccgtgtaccagggaagtgtgtccggtctctcgtacagaaccaggattgat
gaagataactgtgttgctctgatgccgaatggtcgtctgtgtctctcactggacaaacat
tccttccaggtcttgggagttgaggggaaaccgtcgaagttcaaccacagaacaaagaac
agattcgtcgtatccgtggatctgactgacagcagcatggctcctggtgggcggggctac
gtcagactcctcacaggtctgaggtcacgacttcacctgaggaccgacttcctgctgtca
catcatccagcggtctgtcctgcagggggtggagcctctctgcagcacctcctgtctcgt
tatgattggtcggagcacagacctgagatcagcagtcgggtcctgacacacctgtcctgt
ccccccctgctgtcctctgacccgcagccaggggacgctcacagtttcctcgagtggctc
ggagccgtggacgccgacatcagctgcgagaactcgtccaacagcttcatgtcctcattg
gtctgtccggcgccgaagacgatgctgagtagagctctgagcgtctctgtctgtggactg
ctgcttcctcaggacgtccaccggctcgtccaggagctcaggtgtcacctggagcagcct
cggctggcgccctgggcgtctctgacggttcacggtttcgttgacagtcctgtatcttgg
ggggatggtgagcacggagtcctgataggaggagagaacttctacaacctgctgatgttc
cacgaccacacctaccaccttcacctggctacaggggcacatgacacctgtccacagtga
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