Hippoglossus stenolepis (Pacific halibut): 118117662
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Entry
118117662 CDS
T08308
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118117662 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118117662 (depdc5)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
118117662 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
118117662
NCBI-ProteinID:
XP_035025966
LinkDB
All DBs
Position
11:complement(451513..479494)
Genome browser
AA seq
1586 aa
AA seq
DB search
MKTNKSYKLVLHKKGFAGSDDELVVNPKVFPQVSLGDIIEIAHPTDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVTTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYNAKSIDEFPEILRG
SIRQDHEGRFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYSVLVRLKEADGFPVGYNST
AAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRLTSGDSRVGDDYNLPHWINHSFYTSKSLNSCSSFT
PRIKLAGHKIHAEKFKSSKDHTLCAPKDSDNSLPIQVDYDAYDAQVFRLPAPSRIQRSTN
FRMGRDKEMSGRKSWGSVDVSAGIGASPPIRSGGPEEKRSLASDDSLGPVSNMLLIPRMP
PAQYEVSSSLGYTSTRELLEKMMDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQRALINP
FTPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSQQRDPAHTSAELLE
LAYHEATGRRTTSRQAGEGLYIGGGMDEFTGSPGSNNSGTLANHGSSFEDFSLISADPTL
LLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQALQNDYTEGCYDLLPHSDLER
REDESPVMSASQVFEEFICQRLMQGYQIIVQPNNRKPQPAVATPLGSSPLYSRGLVSLRR
AEEEETVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYSYSLCPPHSDAQFVSC
WVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGEGHW
DIYGEGASARVGGSGDWLLLDGFVRFLEGLNRIRRRHRSDRIIRPKGTPMKGLQITSPLP
PYPPEPVAPQGKKGTSALSALLEMDQNQKTLEEQQQQMKPSAAVSDPTTVATAPTHIDSP
RKDAAFILDFIRSPRSSYIYHSQLPAEVSEAADKGVQPGATGGAAAQPAGETAASSSIDT
SGQSATGVVSLSSSSPPLEILEAIKHPTTGVQLLPEQKGLPLNCFISAEVVHWLVNNVDG
VDTQAMAVDKMQKMLDEGLVAHASGEAMRTFVYGFYFYRIVGEKDGPISQLPPTAPGVWS
TAALEDFTLFQRKWFEVAFVLEEQQPCDLPTFLLPWLPSRPASYASRHSSFSRSFGGRSQ
AAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSLTAAFEIKLHWMAVTAAVLF
EMVQGWHRKAASCGFLLVPVLEVPFALTSYLYGDPLRAQLFISLNIQCLLKNGSDKLFEG
FEPETYWERMQLFQEAILYRFGFVHDKFSASAFNFPSENKPQYIHVTGTLFLQLPYSKRK
YSSGQQRRRRNSTTSNSHGPFGSEEQVGYYWAYNTMLTKAWRTGVLGDERLSDRLLRDFT
DFCSNKDNRLLNFWDSCQEKMNTSAP
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaacaagtcatataagcttgtgctgcacaagaaaggttttgctggaagtgat
gatgagttggttgtcaacccaaaagttttccctcaagtcagtcttggggacataattgag
attgcgcaccccacagatgaatacagtcctctcctgctgcaagtgaagagccttaaagag
gatttacagaaagagacaatcagtgtggaccagactgtagcacaagcctttaaactccgt
gcataccaggatgtcattgttaacattgttgacccaaaggatgtaacactagacttggtg
gagctgactttcaaggaccagtacattggcagaggagatatgtggagactaaagaagagc
ctggtcaccacatgtgcttatgtgacacagaaagtggagtttgcaggaatcagagcccag
gccagtgaactctgggtaaaaggagagaaagtgacctgtggttacatcagtgaagacacc
agggtggtgttcagatccacatctgcaatggtgtacatcttcatccagatgagctgtgag
atgtgggactttgacatctatggtgatctctactttgagaaggctgtaaatggtttcctg
tctgacctttttgccaagtggaaggagaagaactgtagtcatgaggtgacagtcgttctt
ttctcacgtacattctacaatgctaaaagtatagatgaatttccagagattttgagaggc
tccatcaggcaggatcatgagggacgattttatgaagacttctatagggttgtggctcag
aatgagaggcgggatgagtggacatctttactggtcactattaagaagcttttcatccag
tattctgtcctggtgcgactgaaagaagcagatggttttcctgtgggttataactcaact
gctgctcagggaaactacctggaggccattaacttgtccttcaacgtatttgacaagcac
tacatcaaccgaaactttgaccgcactggacaaatgtcagttgttattacacctggggta
ggagtgtttgaagtggaccgtctactgatgattctcaccaaacagagaatgattgacaac
ggtattggggtagacttggtgtgtatgggggagcagccattgcacgcagtaccattgttc
aagctgcacaataggttgacctctggagactctcgtgtgggagatgactataacctgccc
cactggatcaaccacagcttctacacctccaaaagtctgaactcttgtagctccttcacc
cctcgaatcaaactggctggtcacaagattcatgcggaaaaattcaagagcagcaaagac
cacactctctgtgctccaaaggactctgataacagcctgcctatacaggtggactatgat
gcctatgacgctcaggtgttcagacttcctgctccttcgcgaattcagagaagcaccaac
ttcaggatgggtcgagacaaagagatgagtgggaggaagagctggggctccgtggacgtc
agcgcaggcataggggcgtcccctcccatacgctctgggggtcctgaggaaaagcgtagc
ctggcctctgatgatagtctaggcccagtgtccaacatgctgctgatacctcgcatgcct
cctgcccaatatgaagtcagcagttctctcggatacacaagcaccagggagttgttggag
aagatgatggactctcagcgagactccagtgccccgggcaggttcacagtgggaagtgcg
gagtcgacgctgcacatccgtccaggaggttacaccccacaaagggctctgataaacccc
ttcacaccatccaggatgcccatgaagctcacctctaaccgccggcgctggatgcacact
ttccctgtcggtccttctggagaggccatccagatccatcaccagaccagacaaaacatg
gctgaactgcagggcagccagcagagagatcctgcccacacctccgccgagctgctggag
ctggcttatcacgaggccactggaaggcgaacaacatctagacaagcaggagagggcctt
tacattggtggagggatggatgagttcactggaagcccagggagcaataacagtggaact
ttggctaaccatggctcctcctttgaagacttttccctcatcagtgccgatccaaccctg
ctgctgtctgcacccccgacagtgcccagcttctgctgcacagtgggggtagactggaag
tctctgaccacaccggcctgcctgcccctcaccaccgattacttcccagaccgccaggca
ctacagaacgactacaccgagggctgctacgaccttctgccgcacagtgacctggagagg
cgggaggatgaatctccagtgatgagtgcgtctcaggtatttgaggagtttatctgtcag
aggttgatgcagggctaccagatcattgtccagcccaataacagaaagccacagcctgct
gtagccacgcctcttggcagcagccctctttactccagagggctggtgtctctgcgtcgg
gcggaggaggaggagacagtgtactggctcagtatgggccggaccttccataaagtttgt
ctcaaagacaaaataatcactgttactcgctacctgccaaagtacccatacgagtcagct
cagatccagtacagttacagcctgtgtcctccacactctgatgctcagtttgtctcctgc
tgggtggagtttggccacgagagactggaggaatacaaatggaactacctagaccagtac
atttgctctgctggctcagaggacttcagtttgatcgactcactgaagttctggaggact
cgcttcctactgctgccagctggaggtgcacgccgagtggcagatggggagggccactgg
gatatttatggggagggagcaagtgctagggttggtggtagcggggactggctactgctg
gatggtttcgtccgcttcctggagggtctcaatcgcattcgccgacgccaccgctctgac
aggataatcaggccaaaaggcacaccaatgaaaggactgcaaattacgagtcctctccct
ccatatcctcctgagcctgttgccccacaaggcaagaaaggcacatcggctttgtcggcc
ctgctggagatggatcagaatcagaagacgctggaggagcagcagcagcagatgaagccc
tcagcagctgtcagtgaccccaccactgttgcgacagctcccacacatatagacagtccc
cgcaaggacgctgcctttattttggattttatacgtagcccacgctcctcctacatctat
cactctcagttgcctgctgaagttagcgaggctgcagacaagggagtccagcctggagcg
acaggtggagcagcagcacagccggcaggagagactgcagccagcagcagcatagatacc
agtggccagtctgcaacgggagtcgtctctctgtcctcctcctcacctcccttggagatc
ctggaagcaatcaaacatcccacgacaggtgtacagctgctcccagagcagaaaggtctc
ccactcaactgctttatcagcgctgaggttgttcattggctggtcaataatgtcgatgga
gtggatacacaggcaatggctgtggataaaatgcagaaaatgctggatgaaggtttggtg
gcccatgcttctggagaagcaatgcgcaccttcgtctacggtttctacttctacaggatt
gttggagagaaggatgggccaatctcccagctcccccccacagctcctggagtttggtcc
actgcagccctggaggacttcaccctgttccagagaaagtggttcgaagtggcttttgta
ttagaggagcagcaaccctgtgacctcccgactttcctcctgccctggctgcccagccgg
ccagcatcctacgcaagtaggcacagctccttcagccgcagctttggaggacgcagccag
gccgctgcactgctagctgctacagtcccggagcagaagacagtcacgctggatgtggat
gttaacaaccgcagcgaccggactgaatggtgcagctgttattaccatggaaacttctcc
ctcaccgctgcctttgagatcaaactgcactggatggctgtcactgctgcagtgctcttt
gaaatggttcaagggtggcataggaaagcagcctcgtgcggcttcctgttggttccggtg
ctggaggttcctttcgctctgacctcctacctgtatggagacccactgagagcccagctc
ttcatctctctcaacatccagtgtctgctgaagaacggcagtgacaagctatttgaaggt
tttgaaccagagacctactgggaaaggatgcagctctttcaggaggccatactgtacaga
tttggcttcgtgcacgacaagttttctgcttctgcttttaatttcccctctgagaacaaa
ccccagtacattcacgttacaggaaccttgttcctacagctcccatactccaagaggaag
tactcgagtggacagcagcgccgccgccggaactccaccacctccaacagccacgggccg
ttcggcagcgaggagcaggtcggttactactgggcctacaacaccatgctgaccaaagcc
tggaggacaggtgtgctgggtgacgagaggctgtctgaccgcctgctcagggacttcact
gacttctgcagcaacaaggacaatagactgctcaacttctgggacagctgccaggagaaa
atgaacaccagtgctccctga
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integrated database retrieval system
