Hippoglossus stenolepis (Pacific halibut): 118117688
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Entry
118117688 CDS
T08308
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X2
KO
K15623
protein SSXT
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118117688 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118117688 (ss18)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118117688 (ss18)
GBAF(ncBAF) complex
118117688 (ss18)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
118117688
NCBI-ProteinID:
XP_035026033
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All DBs
Position
11:complement(14740804..14753443)
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AA seq
390 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPAGIQKLLDENNHLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPQPPHGHTMPSEGMVSGGPPAPHM
QSQMNGQMPGPNHMPMQGPGPNQPPNIPSGSMNMPPSSHGTMGGYNHTVPSSQGIPAQSQ
MNMTQGQPMANYGPRPNMNMQPNQVIQTDSPSKSSPMMHQQPPAQQYNMPPGGGGQHYQG
QQNPMGMMGQVNQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEGNA
QYGQQQEAYQQGPPQQQGYPPQQQYPGQQGYPPQQQAYGPSQSAPGQYPNYPQGQGQQYG
TYRPPQPGPPQGQQQRPYGYDQGQYGNYQQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttcgcacctcacaggcagcgcgggaaaggcgacattacacccgcggga
attcaaaagctactcgacgaaaacaaccatctgatccagtgtataatggacttccagagt
aaaggcaaaacagcagagtgttcacagtatcaacagatgctgcacagaaatctagtgtac
ctcgccacgatagcagactccaatcaaaacatgcagtctctcctccccgctccacccact
caaaacatgcccatgggccctggtgggatgaaccaaagtggacctccccctcagcctcct
cacggtcacacaatgccctctgagggtatggtcagcggtggccctccagccccacacatg
cagagccagatgaatggacagatgcctgggcctaatcacatgcccatgcaaggtccaggt
cctaaccagcccccaaacatccccagtggctctatgaatatgccccccagcagtcatggc
acgatgggtggttacaatcacaccgtcccctcctctcagggcataccagctcagagccaa
atgaacatgacccagggccaacccatggcaaactatggtccacggccaaacatgaacatg
cagcccaatcaagtaatacagactgactcccccagtaaatccagccccatgatgcaccag
cagcctccagcccagcagtataacatgcctcctggtggtggcggacagcactaccaagga
caacagaaccctatgggcatgatgggtcaagtcaaccaggggaaccatgtcatggggcag
aggccaatgccgccctacagacctcctcagcaaggaccccctcagcagtacccagggcag
gaagactactatggggaccagtacagtcacgcaggacagggagcctcagaaggtaatgcc
cagtatggccaacaacaggaagcataccagcaaggccctccccagcagcagggctaccct
cctcagcagcagtacccaggtcagcagggctacccaccacagcagcaggcttacggtccc
tcccaaagtgcccccgggcagtatcccaactatcctcaggggcaggggcagcagtatgga
acctatcgccctcctcaacctggacccccacagggccagcagcagcgcccttacggttat
gaccaaggccagtacggaaattaccagcaatga
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