KEGG   Hippoglossus stenolepis (Pacific halibut): 118117747
Entry
118117747         CDS       T08308                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    118117747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsp03400]
    118117747
DNA repair and recombination proteins [BR:hsp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     118117747
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_IP5PC_F WDR54 Beta-prop_NUP159_NUP214 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 118117747
NCBI-ProteinID: XP_035026155
LinkDB
Position
11:complement(6617328..6627164)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSTANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggagaaaagtacaggtgtcctatgtc
attagagatgaggtggagaagtacaatcgaaatggggtgaatgctctccagctcgaccca
gctcttaaccggctcttcaccgctgggagagactccatcatccggatatggagcgtctac
cagcacaagcaggacccgtacattgcctcaatggagcatcatacagactgggtcaatgac
attgttctctgctgcaatggaaaaacattgatatctgcctcatcggatacaacagtcaaa
gtatggaatgcacataaaggattctgcatgtccacgttacgaacacacaaggactatgtg
aaagctttggcctacgccaaggacaaggagctggtagcgtcggcgggtctcgaccggcag
atctttctttgggatgtgaacacactaacagcgctcactgcttccaataacactgtaacc
acctcctctctcagtgggaacaaggactctatctacagtctggctatgaaccagatgggc
acagtcatagtgtctggatcaacagaaaaggttcttagagtgtgggatcctcgaacgtgt
gcaaaactaatgaagctaaaaggtcacacggacaacgtcaagtcattgctgttgaatcga
gatggcactcagtgcttgtcaggcagctcagacgggaccatccgcctttggtccctcggc
cagcagaggtgtatcgccacctaccgggtgcacgatgaaggggtgtgggccctgcaggtc
aacgaggcctttacacacgtctactctggaggcagggacaaaaagatctactgcactgac
ctgcgtaacccagacatccgtgtgctcatctgtgaggaaaaggccccagtgctcaaaatg
gaactggacagatctgctgacccacctcctgcaatctgggtctctaccactaagtcatcc
gttaataaatggtcattaaagggaatgcacaacttcagatcatcaggggagtatgacaat
gactgcactacccctctgacaccactgtgtactcagccagagcaagtcattaaaggaggt
gccagtattatccagtgccacattctcaatgacaagagacacatacttaccaaagatacc
aacaacaacgtggcattctgggatgttctaaaggcttgcaagggcgaagacttggggaaa
gtggagtttgatgaagagattaaaaagcgtttcaagatggtctatgtgccaaattggttc
tctgttgacctgaaaactgggatgctcactatcacattggatgagagcgactgctttgct
gcctgggtgtctgcaaaggatgcagggttttcaagctctgatggatctgatccaaaattg
aacctgggtggactgctgctgcaggctctgctggagttctggcccagaactcgcatcaac
cccatggacgaggaagagaacgaggtgaaccatgtgaacggagagcaggagaaccgggtc
cagaaaggaaatggatatttccaggtgccaccacacacaccagtaatctttggtgaagca
ggaggcagaacactgtttaggttgctatgtagagattccggtggagagactgaatctatg
ctgctgaatgagacagtcccacagtgggttattgacataactgtagataaaaatatgccc
aagttcaataaaatcccattctacctccagccccattcctcttctggtgcaaaaactctg
aagaaagaccgtctctcggccagtgacatgctccaggttaggaaggtgatggagcatgtt
tacgaaaaaatcattaaccttgacaacgagtcgcagaccaccagctccacggccaatgac
aaacccggggagcaggagaaggaggaggacatggccatgctcgccgaggagaagattgag
ctaatgtgtcaagaccaggttctggatcccaacatggacctgcgaacagttaaacatttt
atctggaagagtggcggggacttgacgcttcactataggcagaagtccacgtga

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