Hippoglossus stenolepis (Pacific halibut): 118117801
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Entry
118117801 CDS
T08308
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118117801 (chd7)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118117801 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
118117801
NCBI-ProteinID:
XP_035026244
LinkDB
All DBs
Position
11:2979333..3051731
Genome browser
AA seq
3303 aa
AA seq
DB search
MADPGMLSLFGDDAGLFSDGLDGLGGCFPQQPAPGQSNPLAQQTNPSLNHEHQGNRGYHQ
GMIHAAGSGPGQPKLGQIYDHGPYTGYDQSGAPGGRMMAQNGPSQGTPNVNVAMNGMASH
YHNNPANSSNPHHGYPGEAGAGGGGSGVWGQQPQQQSRSAYQQPPTQPGGGPNQMAGYQM
SQGNYGGMQGPPTPNAARMNQHYPPQSMAPAPAQDPSHYMGHVGMGGAQMRHPQPQPTPQ
VYPNMGHTPQYPHSPSRQPAHTHQHQQGMGGFGGGQYPGYQAQYGAIGPGMGQSANTTVS
TNTGQALGPGQLGQRFNHGSGPAAGQQGQRYPPAPPHQPQPLQTHSAPMQQQTGQQGQPM
HPINHTQHPQNAPQSQNQPQSHIAPPAQGSYPSPASMSPMRVLGAPTPPPQQGRPPSAGL
AGPPEVAGYTALQSPPNAMPHPQRTPQNPLSAPQHQQPHNMPPNAGQIYPSMGPQRGQQM
GPNRPQLQQQQGPHEAPVSQSGDQRILQAQQQASRGGQPLQSASLGFQGAPVSQHGAPAS
NQGLAPPTQNAQTQHTHLPPHHLQSTPPQSSQGSNPWASTSTAPHPLSSPPLTPQKVPHV
QHSPTDPSGDASMMVTERPTVCAGVPSQPISTEQPNNQETKPKKKKKKKAKVVDEEDEGE
KKAGRGSAEVDLMSEFTRSGSEAGEQVTGTGIVEGSSPTVEEKKKRKKKPKEKAEVKEPK
EPKTQKTPKMPKTPKDPKEKKAKSSMPKTKPPKKNSSKKVESEVGPGTAKKDSKRKRESS
VSDDVEVKSPPPSPPEDDDDDGVQKRRSSRQVKRKRYTEDLEFRISEDDVSGDDSQTPKS
PSSSQQQEMIEAEGPIVEKIMVLRLSKKQLEEGEEVEVEEFYVKFKGFSYLHCRWADLQE
LEKDKRVHQKIKRFRAKQLLNTFITEMDDEPFNPDYVEVDRVLDISESTDENGETVTLYL
VKWCSLPYEDSTWELKADIDQSKIEEYERIAARTPNLKRVERPPAADWKKFEGSKAYRNS
NSLREYQLEGLNWLTFNWYNLRNCILADEMGLGKTIQSITFLYEIFLKGIEGPYLVIAPL
STIPNWEREFRTWTELNAVVYHGSQASRKTIQAYEMYHRDAQGKIIKGVYRFNAIITTFE
MILADCPELRSIPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELF
SLLNFLEPERFPSETTFMNEFGDLKTEEQVLKLQAILKPMMLRRLKEDVEKNLAPKEETI
IEVELTNIQKKYYRAILERNFTFLSKGGVGGGGSGGGGANVPNLLNTMMELRKCCNHPYL
INGAEEKIIEEFRDSNGGRTDLPDMALQAMVQAAGKLVLIDKLLPKLKAGGHRVLVFSQM
VRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINL
TAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLD
KAVLQSMSGRENANSGVQQLSKKEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRT
HTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKAELDMDAMNGRNTLVIDT
PRVRKQTRHFSSAKEDEMLEFSELESDEDEPSKPSTKPRRPQDKAHGYPRSECFRVEKNL
LVYGWGRWSEILAHGRFKRPLKEADVETICRALLAYCLLHYRGDENIKSFIWDLITPSED
GTTKTLTNHSGLSTPVPRGRKGKKGKPQAPAPQTPRADWLASCNPDHLLQEDSYKRHLKH
HCNKVLLRVRMLYYLRQEVIGDQAERILEGADTSELDIWIPQPFHAEVPADWWDSEADKS
LLLGVFKHGYEKYNSMRADPTLCFLERVGMPDAKAIAAEQRGADMMTDGVEGEDEDPEYK
PMRMPFKDEMDDFTNSPLDDKDDTVEGETEVAKSSENGTTVGGASGSNERLYWPAASALT
ARLRRLITAYQRSNRREQLRQEALNRPDGRRRRRRDFLPSIPMVTEAGGGATYIQDGATV
FLTEGTPYLAKGSAYFAKGGQLMAESSPVMAAGSLMADGAMYYKERRQRWTRREEADFYR
VVSTFGVVFDTQHQKFDWSQFRAFARLDKKTDESLEKYYYSFIAMCKRVCRMQVKTETEL
PDPTLIIDPITEERASRTLYRIELLRRIREQVLPHTLLSERLKLCQPSQDLPEWWECGRH
DRDLLLGASKHGVSRTDYHILNDPTLDFLEAHQRFNGQRGAGIGVGTQGEMTKAGMGAAE
STSVLLLTPAELASAAAAAKIAVSAAEEVKTEEGQTEIAVKKETDGGDSNDIPCTKTETP
DEQENEGEVEKGEDEAAASPSKEVKEEETQIKVEKEEEEVKEEQRGEEETKLAEEEAKDL
IEEKKSLSPDSQGDQEEMTIELSEHPESSPKAQPGLKTEREEDREERENQESPKSLKLAD
TDKSPEEEEEERMDEDDKSEKSSQAEASAASEQKNFDEESIASLSTSARDETRDGFCPDD
LPETSALHALHDRAYAFSFWPKDRLMINRMDNICEAVLKGKWPVNRRHIFDFPGNLLPGH
GSAVTTAAVATATDSSLQRRSLAELTMAAIHTPYSGNEDKTLSPQVHEDALSLTLPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESHAAAESQSQAIDLTKAMHHHHKASPSLAGFP
SGLVTSSSLKAQMELLQQAPTSGQRANGSLEADLPIMRRRRGRRKNVEGLELLFMGNKRA
GGDDADGAKVLAVEGVQPSARAHRSNTIPEQSPSARSLASGSLEEEEAPVSNKELGEWLR
QHPTYTMDMAGFTPKNEELLLSQFSKPKQKRHRCRNPNKIDINTLTGEERVPVINRRNGR
KMGGAMAPPMKELPRWLLENPEFSIAPDWTDIVKQSGFLPEAMFDRLLTGPVVREEGVRR
RGRRPKSEIAKAAASAQAAAAAQAAQASLATVASSAGGINPLLLNSLFGGMDLSSLQSLQ
SLQLAAGLMAFPQPTDPKQAAASAAAASMLPLMLPGMGGLPNMAAALPNIFSLGSLFGGN
LATAAASNAAMAAAVSGITNGTMGGEGGDIGEMVTTKRRREAEEKEGESGEEEEEDEEEA
DGNRVKKAQRKMEKEKMNNATAEASINGDAAALLAAAGMSANSLAFNPFLLSTMAPGLLY
PSMFLPPGLGGLTLPGFPTASTLAELQSAMAGMLGGNAISTNPPRVVGEEKKVLKASAEE
EEEEDDDDEDYDEKEEEGGGESDLAEEKDEDARGEADDSVLEDGGMGGEEEEAAASPQKD
TSD
NT seq
9912 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccggggatgttgagtctatttggggacgatgcagggctgttctcagatgga
ttagatggtttaggaggctgctttcctcagcagcctgcccctggccagtccaacccccta
gctcagcagactaatccctctctgaaccatgagcaccagggaaacaggggttaccaccag
gggatgatccatgccgctgggagtggcccagggcagcctaaattggggcaaatatacgac
cacggcccctacacaggctacgatcaatctggtgcacctggaggacgaatgatggcccag
aatggtcccagccaggggacaccaaatgtgaatgtggccatgaacggcatggcttcccac
taccataataatccagctaactcaagtaacccccaccacgggtacccaggtgaggctggg
gcaggaggaggtgggagtggagtttggggccagcagccgcagcagcagagcagatcagcg
tatcagcagcctccaacacaaccagggggcggccccaatcagatggcaggctaccagatg
tctcaaggcaactatggtgggatgcaaggcccacctacacccaatgcagctcgcatgaac
caacactatccaccacagagcatggcaccagctcctgctcaggacccatctcactacatg
ggacatgttggaatgggaggggcccagatgagacacccacagccccaaccaacaccccag
gtctatcccaacatgggtcacacaccccaatacccacactccccctcccgacagcctgcg
catacccaccagcaccaacagggtatgggtgggtttgggggaggccagtaccctgggtat
caggcccagtatggagccattggacctgggatgggccagagtgctaatactacagtcagt
actaacaccggccaggcattgggaccggggcagcttggtcagaggtttaaccatggatca
ggcccagcagctgggcagcaggggcaacgatatccccctgcaccaccacaccaaccacag
ccacttcaaacccattctgcccctatgcagcagcagacaggacagcagggccagcctatg
caccctataaaccacacccagcacccccagaatgcgccccagtcccaaaatcaaccccag
tcacacattgcccccccagctcagggatcttacccctcccccgcatccatgtcccccatg
cgggttttgggagccccaacgcctcctccccaacagggcagaccccctagcgcaggacta
gctgggcccccagaggttgcagggtacacagccctgcagtctccacccaatgctatgccc
catccacagagaactccccaaaaccctttatctgccccccaacaccagcagccccacaac
atgccccccaatgcagggcagatatatcccagtatggggccgcagcgtggtcaacaaatg
ggcccaaataggcctcagctccagcaacagcaaggacctcatgaagctccagtcagccag
agtggagaccagcgtatactccaggcacagcagcaggcctctcgaggtgggcagcccctg
caatccgcttccttgggtttccagggtgcacctgtcagtcaacatggagctccagcctca
aaccagggcttggcgccacccacccagaacgctcagacacagcacacacacctgcccccc
caccacctgcagagcacacccccacaatctagccagggatccaacccatgggcgtccacg
tctactgccccccacccactctcctcaccccctcttactccacaaaaagtgcctcacgta
cagcattcccccacggacccgtcaggcgatgcctcaatgatggttactgaaaggccgacc
gtttgcgctggtgtgcccagccagccaatcagcacagagcagcccaacaaccaggagacc
aagccaaaaaagaagaagaaaaagaaagcaaaggtagtggatgaagaagacgagggagag
aagaaggcaggaagaggaagcgcagaggtagacttgatgtcagaatttaccagatcagga
agtgaggcaggtgaacaggttactggcacaggaattgtagagggaagttcaccaacggtg
gaggagaagaaaaagcggaaaaagaaaccaaaggagaaggcagaggtcaaggagcccaaa
gagcccaagacccagaagacgcctaaaatgcccaagacccccaaagatcccaaggagaag
aaagccaagagctccatgcccaagaccaagccccccaagaaaaacagcagtaagaaggtg
gagtcagaggtcgggcctggcacagctaagaaggattccaagaggaagagagagtcatca
gtcagcgatgatgtggaggtgaagagtccacctccatcgcctcctgaagatgacgatgat
gacggtgtacagaagcgtcgttccagccgccaggtgaagaggaagaggtacactgaagat
ctggagtttagaatttcagaggacgatgtcagtggagatgactcacaaacaccaaaatcc
ccgtcatcatcccaacaacaggaaatgattgaagctgaggggcccattgtggagaagatc
atggtcttgcgcctctccaaaaaacagctggaggagggggaggaagtggaggtggaggag
ttctatgtcaagttcaagggcttctcgtacctccactgtcgctgggcagacttgcaggag
ctggagaaggacaagagagtgcaccagaagatcaagaggtttagggcaaagcaactactc
aacacctttataactgagatggatgatgagccttttaacccagactacgtggaggtggac
cgcgtcctggacatttcagagagcacagatgaaaatggagagacggtgaccttatatttg
gtgaaatggtgcagtctgccctacgaggactccacatgggagctgaaggctgacatcgac
cagtccaagatagaagaatatgaacgcatcgcagcacgcacacccaaccttaagagagtg
gaacggcctcctgcagccgactggaaaaagtttgagggctccaaagcatacaggaatagc
aactcactcagggaataccagttagaaggcctcaactggcttaccttcaactggtacaac
ttacgcaactgtatcttggctgatgagatgggtctagggaagaccatccagtcaattacg
ttcctgtacgaaatcttcctgaagggcattgaggggccgtacctggtgattgcccctctc
tctaccatccccaattgggagagagagttccggacctggaccgagctcaacgctgtggtc
taccacggcagccaggccagccgcaagaccatccaggcctacgagatgtaccatagagat
gcacagggtaaaataataaagggagtttatcggtttaacgcgattataacaacttttgag
atgattctggctgactgtccggagcttcgcagcatcccatggcgctgtgtggtgatagac
gaagcccaccgcctcaaaaacagaaactgtaaactactggaaggactcaaaatgatggac
atggagcacaaagttctgttgacaggaactcccctccagaacactgtggaggagctcttc
agcttactcaacttcctggagcctgagagattcccctctgaaacgacattcatgaatgaa
tttggagacctcaagactgaagaacaggttctgaaactgcaagccattttgaaacccatg
atgctgagaagactgaaagaggatgtggagaagaacttggcccctaaggaggagaccatc
atcgaggtggagctgaccaacatccagaagaaatactatcgggcaattctggagaggaac
ttcaccttcctgtccaaagggggtgtaggaggaggtggcagcggcggaggaggagcaaat
gtccctaaccttctcaacaccatgatggagctgagaaaatgctgcaaccacccctacctc
attaatggagcggaagaaaagatcattgaagagttcagggactccaacggaggcaggacc
gatttgccagacatggctctccaggccatggtccaggctgcaggcaagcttgtgctcatt
gacaagctgctgcccaaactgaaggcaggtggacacagagtcctggtgttcagtcagatg
gtccgctgtctggacatcctggaggactacctcatccagaaacgatatccctatgagcgt
atagacggcagagtacgtggtaacctgcggcaggcagccatcgaccggttctctagacca
gactcggaccgttttgtcttcctgctgtgtacacgagctggagggcttggcatcaacctg
acggcagccgacacctgcatcatctttgactcggactggaaccctcagaacgacctgcag
gcccaggccaggtgtcaccgtatcggccagtcaaaggccgtcaagatataccgtctgatc
accaggaacagctacgagagggagatgttcgacaaggccagtctgaagctggggctggac
aaggctgtgctgcagagcatgagtggccgggaaaacgccaacagcggggtccagcaattg
tcgaagaaggaggtcgaggacctcttgaggaagggagcttacggagctctaatggatgag
gaagacgaaggctcaaaattctgcgaggaagacatcgatcagatcctccagaggcgaact
cacaccatcaccatcgagtctgagggaaagggctctacatttgctaaggccagttttgtt
gcagccggtaaccgaacagacatttctctcgaggatccagacttctggcagaaatgggcc
aagaaggctgagctggacatggatgccatgaatggacggaacacactagtgattgacaca
ccaagggtgaggaagcagacacgccacttcagcagcgccaaagaggacgagatgctggag
ttctcagagttggagagcgacgaggacgagccaagcaaaccctcaaccaaaccacgacga
ccccaagacaaagcccatggctacccccggtctgagtgcttcagggtggagaagaacctg
ctggtctatggttggggcaggtggagtgaaatcctggcccacggtcgattcaagcgccct
ctcaaggaggccgatgtggaaaccatctgcagagccctgctggcctactgcctgctgcat
tacagaggagacgagaacatcaaaagttttatctgggaccttatcactccgagtgaagat
gggaccaccaagacactgaccaaccactctggtctctctaccccagtgcctcggggtagg
aaaggcaaaaaggggaagccccaggctccggctccacagaccccacgagctgattggctg
gccagctgtaatcctgaccacttactgcaagaggatagctacaagagacacctgaaacat
cactgtaacaaggtgctgctgagggtgaggatgctgtattatctgagacaggaagtcata
ggcgaccaggccgagcgcatcctggaaggagccgataccagtgagcttgatatctggatc
ccccagccgttccatgctgaggtcccagccgactggtgggacagtgaggccgacaaatcc
ctcctcctcggtgtcttcaaacatggctatgagaagtacaactcaatgcgggctgacccc
accctgtgtttcttggagagggtgggcatgccggatgccaaggctatcgccgctgagcag
aggggtgccgacatgatgacagatggtgttgagggagaggatgaggatccagaatacaag
ccaatgcgaatgccttttaaagatgaaatggatgactttaccaactctccgctggatgac
aaagatgacaccgtagagggagagactgaagtcgctaaatcaagtgaaaatggaaccact
gtgggcggagcttcaggctccaacgagcgtctttattggcctgcagcctcagctctgaca
gcccgcctgcgtcgcctcatcacggcataccagcgctccaaccgaagagagcagctgcgc
caggaggccctcaaccgtcctgatggacgacgccgtcgacgcagggatttcctgccttcc
atccccatggttaccgaggcgggaggtggtgcaacttacatccaagatggagcaacagtg
ttcctgacagaaggaaccccatatctggccaaaggaagtgcttactttgccaaaggtgga
cagttgatggcagagtcctcgccagtgatggcggccggctccctgatggctgacggagcc
atgtactacaaggagagaagacaaagatggactcgtcgtgaggaggctgatttttaccgt
gttgtgtcaacctttggtgtcgtctttgacacccagcatcagaaatttgattggtcacag
ttcagggcctttgctcgattggacaaaaaaacagacgagagtctggagaaatattactac
tcttttattgccatgtgcaaacgggtctgcaggatgcaggtcaagactgaaacagaactc
ccagacccaaccctgatcatcgaccccatcactgaggagcgtgcctctcgcactctgtac
cgcatcgagctgctccgccgcatccgagagcaagtcctcccccacaccttgctctccgag
cgcctcaagctctgccagccctctcaagacctcccagagtggtgggagtgtggccgccat
gacagggatctcctcctgggcgcctctaagcacggcgtgagccggacagattatcacatc
ttaaatgaccctacgttggactttctggaggcccaccagcgcttcaacggccagcgaggg
gctgggatcggcgtgggaacccagggagagatgaccaaagctggaatgggagcagcagaa
agcacctctgtacttctccttacgccagcagagctggcaagtgctgctgctgctgccaaa
attgctgttagtgcagctgaagaggtgaagactgaggagggacaaactgaaattgcggtg
aaaaaggaaactgatggaggggattccaacgacattccatgtaccaagactgaaactcct
gatgaacaggaaaatgagggagaggttgaaaaaggggaagatgaggctgctgcttcacca
agtaaggaggtcaaggaagaggaaacccagataaaagtagaaaaagaggaggaggaggtg
aaagaagagcaaagaggagaagaagagaccaaactagcagaagaggaagctaaagacttg
atagaagagaagaagagtctgagtcctgactctcaaggggaccaggaggaaatgaccatt
gagctctcagaacatcctgagtcttctcctaaagcacaaccaggcctcaagactgagagg
gaggaagacagagaggagagggagaaccaagagtctcctaaatctctgaagttagctgac
acagacaagagcccagaggaggaagaggaggagaggatggacgaagacgacaaatcagag
aaatcctcgcaggctgaagcgagtgctgcatcagaacagaagaactttgatgaggagagc
atcgcgtctctgagcacatcagcccgcgacgaaaccagagatggattctgccccgacgac
cttccagaaacttctgcgcttcacgccttacacgaccgcgcctacgccttctcattctgg
cctaaggatcgattgatgattaacaggatggataacatctgcgaggcggtcctgaagggc
aagtggcctgtcaacagacgccacatctttgacttccccggcaacctgttgccagggcat
ggctccgcagtaaccacggcagccgtagccacggcaactgacagctcactgcagaggcgg
agcctggccgagctgacgatggcggccatccatacaccttacagtgggaatgaggataaa
acactatcgccacaggttcatgaggacgctctgagcctgacattgccccgacagaggagg
aggaggagaagaaagatcgagatagaggcggagagggcagccaagagacgcaacctcatg
gagatggtggctcagctgagagagagccacgctgctgctgagtcccagagccaggctata
gacctaaccaaggctatgcatcatcaccacaaggcctctccgtcattggccggatttccc
agtggcctggttacaagctcctccctcaaggcccagatggagttgcttcagcaagcgcca
acctctggacaaagagccaacggttcactggaggctgacctgccaatcatgagaaggagg
cgaggccgcaggaaaaatgtggagggcctggagctgctgttcatgggaaacaagagagca
ggaggggatgatgctgatggggcaaaggtcttagcggtggagggggttcagccttccgcc
cgggcccacagatcgaacaccatcccagagcagagccctagtgccagatctctggcttct
ggcagtctggaggaggaggaggcaccagtgtcaaacaaggagctgggagagtggctgagg
cagcacccgacatacaccatggacatggctggatttacaccaaagaatgaagagttactg
ttgtctcagttctctaagcccaagcagaagcgccatcgctgtcgaaaccccaataagatc
gacatcaacacccttactggagaggaaagagtgcctgtgatcaacagacgcaatggacgc
aagatgggtggggccatggctccaccaatgaaggagcttcccagatggctattggaaaac
ccagagttttctattgcccctgattggacagacatcgtcaaacagtcgggtttcctccca
gaagccatgttcgatcgccttctgactggccctgttgtcagggaggagggcgttcgtcgt
cgtgggcgacgacccaaatctgagattgccaaggcagcagcctccgcccaggcagcagca
gcagctcaggctgcccaggcatcactggccactgttgcttcatctgcaggaggtatcaac
cctctgctgttgaacagtctgtttggagggatggacctgtcttctctccagagcctccag
tctctccagttggctgctggtctgatggccttcccgcaacccactgaccccaagcaggcc
gctgccagcgctgctgctgcctccatgctgcccctcatgctgcctggcatgggaggcctg
cccaacatggctgccgccctccccaacatcttcagcttaggcagtctgtttgggggtaac
ctggcaacagccgctgcatccaacgccgccatggccgccgctgtgtcagggatcacaaac
ggaacaatggggggagagggaggagacattggcgaaatggtaacaacaaagagaaggaga
gaggcagaggagaaagagggagaatctggagaggaggaggaggaagatgaggaggaggct
gatggaaatagagtgaagaaggcacagaggaagatggagaaagagaagatgaataatgct
acagctgaggcgtccatcaacggtgatgccgctgccctgctggcagcagctggcatgtct
gccaactctctggcattcaaccccttcctcctctccaccatggcccctggtctcctctac
ccctccatgttcctacctccaggcctcggggggctcaccctgcccggcttccccactgcc
tccacgctggccgagctgcagagtgccatggccggaatgctggggggcaatgccatttcc
acaaacccccctagagtcgtgggggaggagaaaaaggtgctgaaagcttcagcagaggag
gaggaggaggaggacgacgatgatgaagactatgacgagaaggaggaggagggtggagga
gagagtgacttggctgaggagaaggacgaggacgcgagaggcgaggccgacgattcagtt
ctggaggatggtgggatgggaggagaggaagaggaggcagcagcgtctccacagaaggac
acgagtgactga
DBGET
integrated database retrieval system
