Hippoglossus stenolepis (Pacific halibut): 118117806
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Entry
118117806 CDS
T08308
Symbol
ccdc39
Name
(RefSeq) coiled-coil domain-containing protein 39
KO
K23729
coiled-coil domain-containing protein 39
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118117806 (ccdc39)
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118117806 (ccdc39)
Cilium and associated proteins [BR:
hsp03037
]
Motile cilia and associated proteins
96 nano-molecular ruler
118117806 (ccdc39)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Other domain-containing proteins
Others
118117806 (ccdc39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC39
SlyX
ATG16
GDH_ACT2
Motif
Other DBs
NCBI-GeneID:
118117806
NCBI-ProteinID:
XP_035026263
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All DBs
Position
11:8926360..8944015
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AA seq
948 aa
AA seq
DB search
MNSVLSDVSWDERFAFPEVNAENQAVTAEIRKKEAKLVQLENKLESNKDQKQLMTEFLKN
GQQELENTVALCKAKEREEALEKHLTALAERETGRLEQDTTKMENERRSLAERRNMLENH
IFKTKQKLEEFRNQMNWDQQTMDAFLEESARHDEDAMAIMKYAQQDEQKIKSLTLAIEKK
TLEASEKRKAVDKELTETISAQLALDKMTDNLQQTHLETQQLIHQWENTVKQMNQRDAEM
QQCALQLAEANQTIRERNATSKERKHLLDDQRNNNKETERKMSGAQRQAVKLRQDLKEQE
NNCSTLQDELDSCKGARDKATSSVKSVTTNISRMKKDIQDNDEKLKEARAYNTALEEKLK
EVTQTALSEEERAAQMDQFVRDEDEDIKELDVQLRDCRHELFRRKEHLQALKTKGKDSVA
YVSRSKSTITGLDSQLRKQEKDLLRQQMIINEQDSKVINLDRKLARLQGDVQLDEKQALD
MNIAELTKALEEKKKSANMLTNILKESEEDIRLLKKEMGKSEAQKRDVTEKVEELMLLRI
TSEKELKTLRLRKQDDLVELNILKVEVKRIRDLLYNKTDTVLSLERRKLGLQKALKEREA
EIKVYREMLGQKLKISEQERQRLSAELNEKLSKIVMIKSRFEVVTLSMAAPEGEEEKSQA
YYITKAAQEKEELKQKGDALDAKIHKMELENSALENTIQLFNNSNSMFRKSLNKVNESSP
EYQEKLKLEEELSAAEDTFKFKKRHVQELQQDLQDMNNTFESLLQEEQVEKDKIEYRQSL
ISKLIKEITSQQEKIDRATKQCSKLTKEIRAANNTKSETLEEKDIKLRELEEFNKSIGKM
LNEAVEDKPDLRPVLEKYFLQANLSFPAPSSTPTSHRSSKTNSARSSASLRSPASSASSS
PRASALHSTVLKTVDLGLDMTVTSPPPTTSRRSSSASSSTSSRKLKNS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgttttatcggacgtgagctgggacgagcgcttcgctttccctgaagttaac
gctgagaaccaggctgtgacagcggagattcggaaaaaagaagcaaagctggtgcaactg
gaaaacaaacttgagagcaacaaggatcaaaagcagttaatgaccgagttcctcaaaaat
ggtcaacaagagctggagaacactgtggctttatgtaaggccaaggaaagagaagaagcg
ttggagaaacacctcacagccctcgcagagagggagacaggtcgcctggagcaggatacg
acaaagatggagaatgagcgtcgatctttagcagagaggagaaacatgctggagaatcac
atcttcaagaccaaacagaagctggaggagtttaggaaccagatgaactgggaccagcag
accatggatgcctttttggaggagtcagcacgtcacgatgaggacgcaatggccatcatg
aagtacgcccagcaagatgagcagaagatcaagtcactcactctggctatagagaagaag
acactggaagccagtgaaaagcgaaaagcagttgacaaggagttgactgagactatatct
gcacagcttgctttggataagatgacagataatttgcagcagactcacctggagacacag
cagctgatccaccagtgggaaaacaccgtcaagcagatgaatcaacgtgatgctgagatg
cagcagtgtgcactgcaacttgccgaagctaaccagactatcagggaaaggaatgccacc
agtaaagagaggaagcacttgctggatgatcagaggaacaacaacaaggaaactgagagg
aagatgtctggagcccagcggcaggctgtgaagctgcggcaggatttgaaggagcaggag
aataactgcagtacactgcaggatgagctggatagttgcaagggcgcacgagacaaagca
acgtccagtgtgaagtctgtgacaaccaacatatccagaatgaagaaagacatccaggat
aatgacgagaaactcaaggaggccagggcgtataacactgcgctggaggagaagcttaaa
gaagttactcagactgccctgagtgaggaggagagagctgctcagatggaccagtttgtc
agggatgaggacgaggacatcaaggagctggatgtgcagctgcgtgactgcagacatgag
ctgttccgtcgtaaagagcatttgcaggctctaaagacaaaggggaaggattctgtcgcc
tatgtttccaggagcaaatccaccatcaccggcctggacagccagctgagaaaacaggag
aaagacttattaagacagcagatgatcattaatgagcaggactccaaggtcatcaacctg
gatagaaaactggcacggctgcaaggagacgttcagctagatgaaaaacaagcgctagac
atgaatatcgctgagctgaccaaagccctggaagagaagaagaagtcagccaacatgcta
accaacattctcaaggagtctgaggaagatatccgcttattgaagaaagaaatgggaaag
tccgaagctcaaaagagagatgtgaccgagaaggtagaggagctcatgctgctccgtatt
accagtgagaaggagctgaagacactccggctcaggaaacaggacgacttggtggagctt
aacatcttgaaggtagaggtcaagcgcattagagatctgctgtacaacaagacggacact
gtgctgtcgttggagaggaggaagctgggtctgcagaaagccttaaaggagagggaggct
gagatcaaggtctacagagagatgctcggccagaagctcaagatcagtgagcaggagaga
cagagactgagtgctgagctgaatgagaaactgtccaagattgtcatgataaagagccgt
tttgaagttgtgaccctctcgatggcagctcctgagggggaagaggagaagtcacaggcc
tactatatcacaaaggctgcacaagagaaagaggagctcaagcaaaagggagacgctcta
gatgctaaaatacacaaaatggagctggagaacagcgctctggagaacaccatccagctg
ttcaacaacagtaactcaatgtttcgcaaatctctcaacaaagtcaatgaatcaagtcca
gaataccaggaaaaactgaagttagaggaagagttaagtgcagctgaggatacattcaag
ttcaagaagagacacgtccaggagctgcaacaggacttacaggacatgaacaataccttt
gagagtctgctgcaagaagagcaggttgagaaagataagatagagtacagacaatcactc
atcagcaaactgatcaaagaaatcacctcccagcaagagaagattgacagggcaaccaaa
cagtgctccaagctgacaaaagagatccgtgcagcgaataacaccaagtctgagacttta
gaggaaaaagacattaaactgagggaactagaagaattcaacaagagcatcggtaagatg
ctaaatgaggccgtggaggacaagcctgatctcagaccagtgctggagaaatacttcctg
caggccaatctgtcttttccagctccttcctccacgcccaccagccatcgcagctccaag
acaaactccgcccgcagctctgcatccctcaggtctcctgcatcttcagccagcagcagc
cccagggcctctgcactgcattctaccgtgttgaagactgtggacctgggcttagacatg
actgtgacctcccctcctcccaccacctccagacgttccagctctgcaagtagcagcacc
agcagcaggaagttgaagaactcctag
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