Hippoglossus stenolepis (Pacific halibut): 118117878
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Entry
118117878 CDS
T08308
Symbol
wdr47a
Name
(RefSeq) WD repeat-containing protein 47 isoform X1
KO
K24746
WD repeat-containing protein 47
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118117878 (wdr47a)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
118117878 (wdr47a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_EML
LisH_TPL
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
TPR1-like_2nd
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
118117878
NCBI-ProteinID:
XP_035026390
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All DBs
Position
11:complement(12024805..12038037)
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AA seq
916 aa
AA seq
DB search
MTAEETINVKEVEMIKVILDFLNARKLHISMLALEKESGVINGLYSDDMLFLRQLVLDGQ
WDEVLQFIQPLECMDKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVKC
LHVLEEFCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACTMVAEFIPADR
KLSEAGFKASRDRLFQLLLKGVLYECCVEFCQSKATGEEITESEVLLGVDMLCGNGCDDL
DLSMLSWMQNLSHTVFSCAFEQKQLNIHVDRLVKPAKTGYADLLTPLISKLSPYPSSPLR
RPQSADTYMSRSLNPALDGLSYGLSGQDKRASGGEIVPGKGVSPMSHSFANFHYPGAGGQ
SLSRSLMMESSDCHSIFEESPETSRTDTPVDKMMSSGGAQNLRPDSAPGEDAPPADSAEK
NELRDSTEKYEEYYRQRLRVQQHLEQKQQQRQLYQQMLLEGGVQQEPPPSDMQHSLTEKF
LNRSIQKLEELNVGMDNLGEEVKSLAQQCNGNGNTSASEDNNNPPPVTPEQSLIQGGGVQ
SSTPQRTVGGRPVPPPDESPVVSQSEQKQVGDQQEESPDSMTRSKEGDKSKNLFVPVHTL
EDTQAIRAVAFHPSGALYAAGSNSKTLRVCAYPETLDPSSSSPIKQPVVRFKRNKHHKGS
IYCVAWSHCGQLLATGSNDKYVKVLPFSAETCNATGPDLEFSMHDGTIRDLAFMEGPESG
GAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRFWDL
RVPSCVRVVGTAFHGSGSPVASVAVDPTARLLATGQEDSACMLYDIRGGRIVQVYRPHTS
DVRSVRFSPGAHYLLTGSYDTKVMVTNLQGDLTKPLPQTVVGEHGDKVIQCRWHPEDLSF
LSSSADRTVTLWTHNP
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggaggaaaccataaatgtgaaggaggtggagatgatcaaggtgatcctggac
tttctcaatgccaggaagctgcacatcagcatgctggccctggagaaggagagcggcgtc
atcaacgggctctactcggacgacatgctcttcctcaggcaactggtgcttgatgggcag
tgggatgaggtcttgcagttcattcagcctttggagtgcatggacaagtttgacaaaaaa
aggtttcgctacatcatcctgaagcagaagtttctggaggctctgtgtgtgaataatgcc
atgtctgcagaggatgaaccacagcatttggagttcaccatgcaggaagcagtcaagtgt
ctccatgtcctggaggagttctgtccttctaaagacgactacagcaaactgtgtctgctc
ctcacgctgcctcgtctcaccaaccatgctgagttcaaggattggaaccccagcacggcc
agggtgcattgctttgaggaggcctgcaccatggtggcagagttcatcccagcggacagg
aagctgagcgaggctggattcaaagccagcagggatcgactcttccagctgcttctcaag
ggcgtcctctatgagtgctgtgtggagttctgccagagcaaggccacgggtgaagagatc
acagagagcgaggtcctgctcggcgttgacatgctgtgtggtaacggctgtgacgatctg
gacctgtccatgctctcctggatgcagaacctctcccacacagtcttctcctgcgccttt
gaacagaagcaactcaacatccacgtggaccgcttggtcaagcctgcgaagaccggctac
gctgacctcctcaccccgctcatcagcaaactgtctccatacccctcctccccgctccgc
cgcccccagtccgcggacacctacatgtcgcgttccctgaacccggcgttggacggcttg
tcctacgggctgtctggccaggataagagagccagcggtggggagatagtcccggggaaa
ggggtctctcccatgtcccactcgtttgccaacttccactatcctggagcaggagggcag
agccttagcaggagtctcatgatggagagctctgactgtcacagcatttttgaggaatcc
cctgaaacatcgagaacagacacgcctgtggataagatgatgagttcaggcggcgctcag
aaccttcgtcctgactcggctccgggcgaagacgcgccacctgccgactctgctgaaaag
aacgagctgcgtgactccacagagaagtacgaggagtattatcgccagcgtcttcgagtg
cagcagcatctggagcagaagcagcagcagaggcagctgtaccagcagatgctgctggag
ggcggcgtccagcaggagccgccacccagcgacatgcagcacagcctcacagagaagttc
ctcaacaggtccatccagaagttggaggagctgaacgtggggatggacaatttaggggag
gaggtgaagtctttggcacagcagtgtaacggcaacgggaacacgtcagcttctgaggac
aataacaatcctccacccgtgaccccggaacagagcctcatccaggggggaggggtgcag
agcagcaccccacagcgcaccgtgggggggcgcccagtaccccctccagacgagtcccct
gtcgtttctcagagtgagcagaaacaggttggagatcaacaagaagagtctccagactcc
atgacccggagtaaagagggtgacaagtccaaaaatctgtttgtccccgtgcacacgttg
gaagacactcaggctattcgtgccgttgcctttcatccgtctggagcactgtatgctgct
ggatccaactccaagactctacgtgtgtgcgcttatccagagacgctggacccaagcagt
tcaagtccaataaagcaaccagtcgtccgcttcaagaggaacaaacaccacaaaggctcc
atctactgtgtggcctggagccactgtgggcagctgctggcgacaggctccaatgacaaa
tatgtcaaagttctacctttcagcgcggagacatgcaacgccacaggcccagacctggag
ttcagcatgcacgacggcaccatcagagacctggccttcatggagggtcctgagagcgga
ggggccatcttgatcagcgccggagcaggagactgtaacatctacacaaccgactgtcag
cggggacagggacttcacgccctcagtggacacacaggtcacattctgtctctgtacacg
tgggggggctggatgattgcctccggctcccaagacaagacggtgcgtttctgggacctc
agggtgcccagctgtgtccgagtagtggggactgctttccatggctcaggcagtcctgtt
gcctcggtagcagtagatccgactgcccgtctcctagcaacaggacaggaagacagcgca
tgcatgctgtatgacatcagaggaggacgcatcgtgcaggtgtaccggccgcacaccagt
gacgtccggtctgttaggttttcccccggagcacactacctgctcactggctcctacgac
acaaaggtcatggttaccaacctccaaggtgacctgaccaaaccgctgcctcagaccgtg
gtgggagagcacggcgacaaggtgatccagtgccggtggcacccagaagacctgtccttc
ctctcatcctctgccgaccgcaccgtcacactctggacacacaacccataa
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