Hippoglossus stenolepis (Pacific halibut): 118117894
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Entry
118117894 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-VIIa-like
KO
K21868
myosin VIIb
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118117894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118117894
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118117894
Membrane trafficking [BR:
hsp04131
]
Others
Actin-binding proteins
Myosins
118117894
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118117894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
MyTH4
RA_2
FERM_C1_MyoVII
FERM_M
IRS
Myosin_VII_N
KRIT1_FRMD8_FERM_C
FERM_N
IQ
SNX17-27-31_F1_FERM
AAA_22
nSTAND3
DBF4_BRCT
ABC_tran
AAA_19
PID
Motif
Other DBs
NCBI-GeneID:
118117894
NCBI-ProteinID:
XP_047197974
LinkDB
All DBs
Position
11:complement(7083185..7106244)
Genome browser
AA seq
2107 aa
AA seq
DB search
MLRKGEWVWVDSDIGVPIGARVKVSPSGQRLLVDDEGKEQSLSPEQEASLRIMHPTSVEG
VGDMIKLGDMTEAGLLRNLLLRHRQGIFYTYTGSVLVAVNPYQDFPIYSAEQVNLYHGQK
LGELPPHIFAIAESCYFNMKRHLRSQCCIISGESGAGKTESTKLVLQYLAAVSGEISEQR
VEQQILESNAILEAFGNAKTIHNDNSSRFGKYLEIFFNEDGVIKGARVEQYLLEKSRVCH
QAWGERNYHIFYCMLTGITAEEKKTLKLGDAKEYNFLTKGDCFTCVSRDEAKDYSRIHSA
MKILTFSKNQCEEIHKLLAAILHLGNVCFEGATQNNLETSDVTKSEHFSMAASLLEVEAS
SLAKSLTHRSFMTNRERVTKPLSSEQAADCRDAFVKAIYNKMFIWIVEKINSVTYKKLTS
SDKSSYQSIGLLDIFGFENFKTNSFEQLCINFANEKLQQFFVGHIFKLEQEEYLKEDIMW
NKMNFSDNQNILDLLVGKPCNLLALIDEESHFPKGSDFTMLNKMNQQHRGNKTYVATKNE
YDTNFGIRHFAGVVYYESKGFLEKNRDAVSFDLIKTVEMSTNKLLHQIFETELSTNGVKI
TNNKRVIITPGNSVRAQGDKRKQVPTLSGQFRQSLDSLMKALSACQPFFIRCFKPNNSKK
SKVFDRELCMRQLRYSGMLDTIHIRNLGYPIRHTFQEFVKRYRVLLKTALCDPNNETAAA
CCEAICETVIKGEDKWKIGRTKIFLKDAHDAILERLREQELSRIVVIIHRVLLGHKDRKC
FLKKRRAAVVLQKRWRANREEKVXRHRKLRLQYQRQCAAALTIQTQVRGFQMRKSWRQKR
EAVVLLQAQTRKLLARRTVQKMRDDKEQLDQLAIALQQGLEDLASEAQSADEELEQELEH
FQPAPAVEVVQQTAIESDEFEVRSDLEMIAPLPAPATPPLEEEDDDFDDESDEFSLFRFS
ILHFQSNISHTHINQRLKQPLLPHDDEGDALACLTVWWIILRFMEDIPEPKSLDATSQAS
STLTDRLPARQGRRLSSLVGLDQKILRKNKKKLGAASRRASTILEEPEDVTEDGDILIGE
GPTLDRPLSSLEKLHIIIGYALSRRDIRDEIYCQICKQLVYNNNKKSRMRGWTLLSICLG
IFPPTDLFVKFLEKFVCRGPDGYGAYCTERLRRILANGERKELPCLIELKAAQSKEPIDV
SVTLMDGRTITVHMESASTSAEICQAVALEMGLKDTYGFSLYITFYEKMWSLGSCGKHVL
DAVSQCEQEMKRQGKEEKDTPWSLSLRKELFTPWHDCSMDVISTDLIYRQVIKEIKSGEY
VSEKEDEYVQLASKHYYIQFGSDHSRENVHRVVEGCITTPLIENKSMGKWIQLISSAHLQ
GPYVNGNQSRESVKGALVDSAREKWPLHFSKFYEVTMLSGPPLAKSKFVVAVNWKGIFFM
DEREKRLVELSYLEVKDVNTMKYGXTSLSMMNLSTIQGDFVLRCGEAVDMGALIESNLEG
LRQHSVYALAQQDINGPDDPMVLDCKRGDLLLVEKDEDYSLQETWISATNQRTGGSVRAH
RDSVQFLPTLTRPTEETLELLSPGQKKRSTAQSAPQRDESVAPVSLKEFALENFRTVGKD
VGRQGQYKGLSKEKLWACSKEPLKQPLMKGLVRNSELSSLACNASISILKYMGDYPVKHA
RSSVELTDQIFGPAAQYEALQDEIYCQIMRQMTGNNNRLSLERGWQLMWLCSGLFPPSQS
LLRHTQNFLESRPRDPLADICLKRVQAMCRKEPRKLPPHQVEVDAILQNSNMIFHKVHFP
NDTDEIIEVKSTTSIKDLCCSVASHLNLSSAEGFGLYMKTPNKVVSLDEQKYFFDSLRQT
SDLPKKSKRAKEGNQVNIPYLVIFKRKLWFNVNPGKDEIADLIFHFPQEMPKYLRGYHSC
TKEDMITLGGLLFRSKVDSDRSQFVMIPRMLKDLVPGDQIKMMSADDWKKNIISSYNKQS
GITVQEAKIAFLQAISSWPTFGCAFFEVKQTCESSYPPTVWIAISKQGVSIIDPKNKELL
VMHPFSRITEYRSKGSVFQMAIGTLVRENKFVCETLQAATMEDLLRSYVSMYERQRQSFR
PRNHIFS
NT seq
6324 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaaaggggagtgggtgtgggtggactctgacatcggggtccccatcggagcc
agggtcaaagtatcaccgtctggtcagcggctgctggtggatgatgagggaaaggagcag
agtctgtccccggagcaggaggcctctctcaggatcatgcaccctacgtcagtggagggt
gtaggcgacatgataaaactgggggacatgaccgaggccgggctcctccgaaacctgctg
ctgcgacacagacaaggaatcttctatacctacacaggttcggtgctggttgcagtgaac
ccataccaggattttccaatatactcagctgagcaggtgaacttgtaccatggacaaaag
ctcggggaactcccaccacacatctttgccatcgctgagtcctgctacttcaacatgaaa
cggcatctcaggagccagtgctgcatcatcagtggggagtccggagcagggaagacagag
agcaccaagctggtcctgcagtacctggcagcagtcagcggggaaatctctgagcagagg
gttgaacaacagattctggagtccaacgcaatactggaagcgtttggaaatgctaaaaca
atccacaatgacaactccagtcgttttgggaaatatttggagatcttcttcaacgaggac
ggagtgatcaagggtgcccgtgtggagcagtatctcctggagaagtctcgtgtctgccat
caggcatggggggagagaaactaccacatattttattgcatgctgacaggaatcactgca
gaggagaagaaaactctgaagcttggagatgctaaggaatacaacttcctcactaagggc
gactgtttcacatgtgtgagcagagatgaggcaaaagactacagtcggattcactctgct
atgaaaatcctgaccttctccaaaaaccagtgtgaggaaatccacaagctgctggcagcc
atcttacacctgggaaacgtctgctttgagggtgccactcaaaataacctggaaaccagt
gatgtcaccaagtcggaacatttcagcatggcagcttctctactggaggtcgaggcgtct
tctctggcgaagagtttgacccaccgctcctttatgaccaacagggagagggtgaccaaa
cccctcagctccgaacaggccgcagactgtcgagacgccttcgtcaaggctatctacaac
aaaatgttcatatggattgtggagaaaatcaacagtgtcacctataagaaattgaccagc
agcgacaagtcttcctaccagtccattggtctgctggacatctttggctttgagaacttc
aaaacaaacagttttgagcagctgtgcattaattttgccaacgagaagctccagcagttc
ttcgtgggccacatcttcaagctggagcaggaggagtatctgaaagaggacattatgtgg
aacaagatgaacttcagtgacaatcagaacatcctggaccttctggttgggaaaccctgc
aacctgctggctctgattgatgaggagagccactttccaaagggctcagatttcactatg
ctgaacaagatgaaccagcaacacagggggaacaagacctacgtcgccacaaagaatgaa
tacgacacaaactttggtattcgacactttgcaggcgtggtttactatgagtccaaaggg
tttctggagaagaacagagatgccgtcagttttgacctaatcaagacggttgaaatgtcc
accaataagctacttcaccagatatttgagactgagctttccaccaatggggtcaagatt
acaaacaacaaaagggtcatcattacacccgggaactctgtgcgggcccagggtgacaaa
cgtaaacaagtgcccacgctgagcggccagttccgtcagtccctggactccctcatgaag
gctctgtcggcctgtcagcctttcttcatccgctgcttcaaacccaacaatagcaagaag
tctaaggtgtttgacagagagctgtgtatgcgtcagctgagatattccggcatgctggac
accatccacatccggaatctgggatacccaatccgccacacctttcaggaatttgtgaag
cgctacagggtgctgctgaagacggccctctgtgatcccaacaatgagacagctgctgct
tgttgtgaggccatctgcgagacagtgattaaaggggaggacaagtggaaaataggcagg
accaagattttcctgaaggatgcccatgatgccatcctggaacgactgagggaacaagaa
ctcagcaggatagttgtgattatccatagggtcctgctcggacacaaagacagaaagtgt
tttctgaagaagcgacgggcagccgtggtgttgcagaagcgttggagagctaacagagaa
gagaaagtataaagacatcggaaactccggttacagtaccaaagacagtgtgcagcagcg
ctcaccatacaaacacaggtgcgaggcttccagatgaggaagagctggaggcaaaaaaga
gaggcagtcgtactgctgcaggctcaaaccagaaaactcctggcccgaagaacagttcag
aaaatgagggacgataaagagcagttggaccaattagccatagcccttcagcagggactg
gaagaccttgcctctgaagcgcagtcagctgacgaggagctagagcaggagctagagcat
tttcagcctgcacctgccgtggaagtggtgcaacaaacagcaatcgaatcagacgagttt
gaggttaggtcggatttggaaatgatcgctccgttaccggcccccgctaccccaccattg
gaagaagaggatgacgactttgatgacgaaagcgacgagttttcattattcagattcagc
atccttcacttccagagcaacatctctcacacgcacatcaaccagagactcaagcagccc
cttctgccccatgatgatgagggcgatgcactggcctgtctgactgtgtggtggattatt
cttcggttcatggaggacataccagagcctaaatctctggatgcaacatctcaagcgtcc
agcaccctcacggaccgtctgcctgccaggcagggccggaggctgagcagcctggtggga
cttgaccagaaaatactgaggaagaacaagaagaagcttggagctgccagcagaagagcg
tcaaccatccttgaggagccagaggacgtgacggaagacggggacattttgattggagaa
ggtccaacattggatcggccactgtcatcactagaaaaactgcacatcatcattggatat
gctctgtccagacgagacatacgagacgagatttactgccagatctgtaagcagctggtg
tacaacaacaacaagaagagccgtatgcgaggctggaccctcctctccatctgtctcggg
atcttccctccgacagacctgttcgtgaagtttttggagaagtttgtctgcagggggccg
gatggatatggagcatattgtaccgagcgcctgcgtcgtatattagccaacggagaaagg
aaagagttgccctgtttgatagagctaaaggctgcccagtccaaggagcccatagatgtg
tctgtgactctaatggacggccgcactatcactgttcatatggaatcagcctccacctct
gctgaaatctgtcaagctgtggctctagagatgggtctcaaagacacctatggattctcc
ttgtacatcaccttctatgagaagatgtggtctttgggcagctgtgggaagcatgtgttg
gatgcggtatctcagtgtgagcaagagatgaagaggcagggcaaagaggagaaggacacc
ccctggagtctctccctccgcaaggaactgttcacaccgtggcacgactgctcgatggac
gtgatcagcacagatctgatttacaggcaggtcatcaaggaaatcaagtcaggagagtac
gtcagtgagaaggaggatgaatatgtccagctggcatctaagcactattacatccagttt
ggctctgaccacagcagagagaacgtccacagggtggtagaggggtgcatcaccacacca
ctgattgagaacaaatctatgggaaaatggatccaactcatcagctcagcacatttacag
ggtccttatgtcaatgggaaccagagcagagaaagtgttaaaggggcgttggtcgacagt
gcccgagagaaatggccgctgcacttctccaagttttatgaagttacaatgttgtcagga
cctcctttggccaaaagcaagtttgttgtggctgtaaactggaaaggcatcttcttcatg
gatgaaagagaaaagagactcgttgagctttcttacctggaagtgaaggacgtaaacaca
atgaagtatgggtaaacttcactttccatgatgaatttgtccacaatccaaggagacttt
gtcctgaggtgtggggaggctgtggacatgggtgcacttatagagagtaacctggagggg
ctgaggcagcactcggtgtatgctctggctcagcaggacatcaacggaccagatgacccc
atggtgctcgactgtaaacgtggcgacctcctgctggtagaaaaagatgaggattattct
cttcaagaaacctggatcagcgcaactaaccagcggaccggcggcagcgttagagcccat
agggactcggtgcagtttctgccaactctcacaaggcctactgaagagacactggaactg
ctcagtccaggccagaagaaacgttcaactgcacaaagcgccccgcagagagatgaaagc
gtggctcctgtctcattgaaagagtttgcacttgagaacttcaggactgtggggaaagac
gtgggtcgtcagggtcaatacaaaggtttaagtaaagagaaactgtgggcctgttccaaa
gaacctctcaagcagccgctgatgaagggcctggtccgcaactctgaactcagctccctg
gcctgcaacgcctccatttctatcctgaagtatatgggtgactaccccgttaaacatgcc
cgcagctctgtggagctgacggaccagatctttggtccggcggcgcagtatgaggccctg
caggatgagatctactgccagattatgagacagatgaccggcaacaacaacaggctgagt
ctggagcgtgggtggcagctgatgtggctgtgttcaggcttgttcccgcccagtcagagt
ttgttgagacacactcagaacttcctggagtcgcggcccagagacccgctggcagatatc
tgtctgaagagggtgcaggcgatgtgcagaaaggagcccaggaagctccctccccatcag
gtcgaagtggacgccatcctacagaacagcaacatgatcttccataaagtccattttcca
aacgacacggatgaaataatcgaggtcaaatctacaacctcgatcaaagacctgtgctgc
agtgttgcctctcacctcaacctgagctcagctgaagggtttggcctctacatgaaaaca
ccgaacaaggtcgtgagcttggatgagcagaaatatttctttgatagtttgaggcagacg
tcagacctccctaagaaatcaaagagagcgaaagaaggtaaccaggtcaacattccctac
ctggtgatatttaagaggaagctctggttcaatgtgaatccggggaaagacgagatcgca
gacctcatcttccattttccacaggagatgcctaagtacctgcggggataccacagttgc
accaaagaggacatgatcaccctgggtgggctgctgttcagatccaaagtggattcagac
aggtcccagtttgtcatgatccccaggatgctgaaggacctggttcctggagaccagatc
aaaatgatgtctgctgatgactggaaaaagaacatcatctcctcctacaacaagcagagc
gggatcacggtgcaggaggccaaaatcgccttccttcaagccatctccagttggccaact
ttcggctgtgccttctttgaagtgaaacaaacgtgtgaatctagctacccaccaacagtt
tggattgccatcagcaaacaaggcgtaagcataatagacccaaagaacaaggagctgctg
gtcatgcacccgttcagccgcatcactgagtaccgcagcaaaggcagcgtcttccagatg
gccatcggcaccctggtgagggaaaacaagtttgtctgtgaaacattacaggctgccaca
atggaggaccttctcagatcatacgtcagcatgtatgagcggcagagacaatccttccga
ccgaggaaccacatcttttcttga
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integrated database retrieval system
