Hippoglossus stenolepis (Pacific halibut): 118118130
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Entry
118118130 CDS
T08308
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118118130
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
118118130
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
118118130
NCBI-ProteinID:
XP_035026935
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All DBs
Position
11:complement(11624508..11655337)
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AA seq
1144 aa
AA seq
DB search
MKKKAVGGSGYSRVSAPKTVASKCTRSSSHNCLDPGTSGAPSAKQSGAASNVVMDETDDG
EEESKFQHPRLRRAGGSGSGGSGGGGGSIRMKNFTPGGGASSSASRRNSNKEPCLTHTED
APAARRPSAASRATETQTPCPGDAARRGETSRASGAKASESAVAVEVLTATAGDVCNSVA
PISSMKCNKNGECRRDSGTGSLRSIISKQEKQTGGSGRAEEAGSAKRGACNSTTASMDGS
ITPRGSLTGGYGGESANPGTTPVSSGVHEKKDSKVSFSNAPSRKASSSLYGPTQNQQPRN
SVTFQKPEDGPPIVPAEDGEQGSQASFMQRQFSSMLQPGVNKFSLRMYGSQKAVEREQER
VKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEETTTPWIIFNVVSDTFF
LMDLVLNFRTGIIIEDNSDIILDPQTIKKKYLKTWFIVDFVSSIPVDYIFLIVEKGIDSE
VYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIFNLIGMML
LLCHWDGCLQFLVPMLQDFPSDCWVSLNKMENDTWSELYSFAVFKAMSHMLCIGYGRQAP
ESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPAD
FRQKIHDYYEHRYQGKMFDEESILGELSEPLREEIVNFNCRKLVASMPLFANAEPNFVTA
MLTKLRFEVFQPHDYIIREGTIGKKMYFIQHGVCSVITKGTLAMKLSDGSYFGEICLLTR
GRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQ
HDLNSGVFNNRENEMIQEIVKYDREMVKLVDLQRPRAMSMTPSIGGIFAPPGQSQSGSAI
ATLQQAVAMSFCPQMASPLVGPGTLQSPRMVRRFQVMQNMSSPVSMSPLQSQPPQTLGGA
FGSAISSPPVQSPLAASGRTFQYMASAGPSGSQLSLVQHHAPSPTQTQQRPASHKSTHSL
HTGSLSHDTRALSASQLSLPQEGTTQAASAAPSPSPSTRTSNTSIGPPQPSHSVLPGSSG
VGRSAGAQQRVAFASTPPPGGPAGMGAVAAAAGSGPPDSGVPKKDSIVSLPELDSARSRL
SSNL
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaggcagtgggcggcagtggttacagccgcgtcagcgcacccaagactgtc
gcgtccaagtgcacaaggagcagcagccacaactgtctggaccccggcacatccggcgcc
ccgagcgctaagcagtccggtgcggccagcaacgtcgtgatggatgagacggacgacgga
gaagaggagtctaagtttcagcatccgcggttgcgccgagccggggggagcggcagtggc
ggaagtggaggaggaggaggcagtatcaggatgaagaactttacgccaggagggggagcc
tcgtcctcggcttccaggagaaactccaacaaggagccctgccttacgcacacagaggac
gctcctgccgcccgacgaccctctgctgcctccagagctaccgagacccagacaccctgt
ccgggcgatgctgcccgacgcggcgagaccagcagagcatctggggcgaaggcgtcggaa
tcagcggtcgctgtcgaggttttaaccgcgacagcgggtgatgtttgcaacagcgtcgct
ccaatttccagcatgaaatgcaacaaaaacggagaatgcaggagggactcgggtaccggg
agcctgcgctcaatcatctccaagcaggagaagcagacgggagggtcggggagggccgag
gaagcagggagcgccaagcgcggagcctgtaactcgaccaccgccagcatggacggctcg
atcacaccacgcgggtccctgaccggggggtacggaggagagagcgcaaaccccggcact
accccggtgtccagcggtgtccacgagaaaaaggactccaaggtgtccttctccaacgca
ccaagccggaaagcctcgtcctccctgtacggcccgactcagaaccagcagcccaggaac
tctgtcactttccagaagccggaggatggaccgccgattgtgcccgccgaagatggggaa
cagggcagccaagccagcttcatgcagcggcagtttagtagtatgctgcagcctggagtt
aacaaattctccttacgcatgtatggtagtcaaaaagcggtggagcgggagcaggagagg
gtaaaatcagctggaaattggattatccacccgtacagcgatttcaggttctactgggat
ttcacaatgctgctgtttatggtgggcaacctgatcatcatccctgtgggcatcaccttc
ttcaaggaagagaccactacgccctggatcatctttaatgtggtctcggacactttcttc
ctcatggacctggtgctcaactttcgcactggaatcatcattgaggacaactcagacata
attttggaccctcaaaccattaagaagaagtaccttaagacttggttcattgtggacttt
gtatcctctatcccagtggattacatattcctcatagtagagaagggaatcgactcagag
gtgtacaagactgcgcgggccctgaggatcgtccgctttaccaagatcctaagtcttctg
aggctgttgaggctctccagattaatacgctatattcaccaatgggaggagatcttccat
atgacctatgacctggctagtgctgtgatgcggatctttaacctgatcggtatgatgctg
ctgctgtgtcactgggacggctgtctacagttcctggttcccatgctgcaggatttcccc
tcagactgctgggtgtctctcaacaagatggagaacgatacgtggtcagagctctactcc
tttgctgtgttcaaggcaatgagccacatgctgtgcatcggttacggtcggcaggccccg
gagagtctatcagatatctggctcaccatgctaagtatgattgtaggagctacttgctat
gctgtttttattggccatgcaacggctctcatccaatccctggactcctccagacggcag
tatcaggaaaagtacaagcaagtggagcagtacatgtccttccacaagctgcctgccgac
ttccgacagaaaatccatgactactacgagcacaggtaccagggcaagatgtttgacgag
gagagcattctgggagaactcagtgagccactcagagaggaaattgtcaacttcaactgt
cgcaagctggtggcatccatgccgctgtttgccaacgcggagccaaactttgtaacagcc
atgttgaccaagctgcgtttcgaggtattccagccgcacgactacatcataagggagggc
acgataggaaagaaaatgtacttcatccagcacggagtctgcagcgtcatcaccaagggc
accctggcaatgaaactctcggatggctcttattttggagagatctgtttattgacgagg
ggtcggcggacagccagcgtcagggcagagacttactgtcgactctactctctgtctgtc
gaccactttaatgaggtgctggaggaataccctatgatgagaagagcctttgagactgtt
gccattgaccgactcgaccgcataggtaaaaagaactccatcctgatgcacaaggttcag
catgatctcaactctggtgtcttcaacaaccgggagaatgagatgatccaggagatcgtc
aagtatgaccgtgagatggtgaagctggtggacctgcagcggccgcgagccatgtctatg
accccttccattggtggtatctttgctcccccgggtcagtcacagtcaggctctgctatc
gccaccctccagcaggctgtggctatgagcttctgtcctcagatggcgagtccgttggtg
ggcccagggacgctgcagtctcctcgtatggtgcgaaggtttcaggtgatgcagaacatg
tccagcccagtctccatgtccccgcttcagtctcaaccacctcagacgctcggaggggcg
tttggatctgcaatctccagccctccggtccaaagcccgctcgcagcttcaggacggact
ttccagtacatggcgagtgcaggaccctctgggtcccagttgtccctagtacagcaccat
gcacccagccccacacagacccagcagaggcctgcctcacacaaaagcacccactccctt
catacaggcagcttgagtcatgatacccgggccctgtctgcctcccagctctcactcccc
caggagggaacaacacaagctgcctctgcagcccccagtccttcgccctctacccgcacc
tccaacacctccatcggcccccctcagccctctcattcagtcctgcccgggtcctcaggg
gtagggagatcggcaggagctcaacagagggtggcctttgcctccacaccgcctcctggt
ggacctgctgggatgggggcagtagcagcagctgctggatcaggacctccagactctgga
gttcccaagaaagattcaattgtcagccttccagagctagactctgccagatcccggctg
tcttccaacttgtga
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