Hippoglossus stenolepis (Pacific halibut): 118118142
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Entry
118118142 CDS
T08308
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118118142 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118118142 (copb2)
Membrane trafficking [BR:
hsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
118118142 (copb2)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118118142 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_Vps41
HEAT_GCN1
Rib_recp_KP_reg
Motif
Other DBs
NCBI-GeneID:
118118142
NCBI-ProteinID:
XP_035026954
LinkDB
All DBs
Position
11:10578821..10585591
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AA seq
958 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKLFKNFKD
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLADKVASSHENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEYYLRETCLGTSRPATDYPLVTPNEDRNILEEA
VGYEPKGTFIPTKDPEKKKKEEEKEEKKKEDEEEEEEEKLLSSMAEFSVAAAAAAAAPEA
ALQPEPADPTAVEEQEEEIPEFSLKDKTLDELDVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacattaagcggcggctgacagccaggtcagaccgggtgaagagt
gtggacctccaccccactgagccatggatgctggccagcctctacaacggcagcgtctgt
gtgtggaaccacgaaacacagactctcgtgaagactttcgaagtgtgtgaccttcctgtc
agagcttctaagtttgtggcaaggaagaactgggtcatcacaggagcggatgacatgcag
atccgtgtgttcaactacaacaccttggagcgggtccacatgtttgaggcccactctgac
tacatccgttgcatcgctgtccatccgacccagccatacatccttaccagcagtgatgac
atgttgatcaagctgtgggactgggagaagaagtggtcctgcagtcaggtgtttgagggt
cacactcactatgtcatgcagattgttattaaccccaaggataataatcagtttgccagt
gcctccctggacaggacgattaaggtgtggcagcttggttcttcatctcccaatttcact
ttggagggccatgagaaaggagtcaattgtattgattactacagtggaggagacaagccc
tacctcatctcaggggctgatgatcgccaagtcaagatctgggactaccagaacaagacc
tgtgttcaaactctggagggccacgcccagaacgtctcctgtgtcagcttccacccagag
ctgcccatcatcatcactggatcagaggatggtacggtgcgtatctggcactcgagcact
taccgtctggagagtacactgaactacggcatggagagagtgtggtgtgtaagtggcctc
aggggctccaacaatgtggcgctgggctacgacgaaggcagcatcattattaaggtgggt
cgtgaggaaccagccatgtctatggacacaaatggcaaaatcatctgggccaaacacagt
gaaatacagcaggcaaatctgaaggccatgggtgatgccgaaatcaaggatggagaaagg
ctgccactagctgtcaaagacatgggcagttgtgagatttaccctcaaaccatccagcat
aaccctaatggaaggttcgttgtggtttgcggagatggagagtacatcatttacactgcc
atggctttgaggaacaagagcttcggttcagctcaggagtttgcctgggctcatgactcc
tctgagtatgccatcagagaaagcaacagtgtcgtcaaactcttcaaaaatttcaaggac
aaaaaatcttttaagcctgactttggagcggaagggatctatggaggcttcttgcttggg
gtgaggtcagtgaatggcctggcgttttacgactgggagaacacggagctggtccgccgc
attgagatccagcctaaacacatcttctggtcagactctggggagctggtttgcattgct
acagaggagtccttcttcatcctgcgttatttggctgataaagtagcttcctctcatgag
aacaatgaaggcgtgactgaggatggtattgaagatgcctttgaggtccagggagagatc
caggagattgtgaagactggtctctgggtcggagactgcttcatctacaccagctctgtg
aacagactaaactactatgttggaggagagattgtcacaattgctcatctggacagaacc
atgtacttactgggttacatacccaaagatgatcgtctgtacctcggagacaaggagctc
aatattgtcagttactccctgctggtctccgtcctggagtaccagactgctgtaatgagg
agggactttgggatggctgacaaggtgttgcccacaattccaaaagagcagcggaccagg
gtggcccatttcctggagaaacagggtttcaagcagcaggcactggctgtgtccacagac
ccagagcacaggtttgagctggccttgcagctgggagagttgaagattgcttatcagctg
gctgtggaggcggagtcggagcagaaatggaagcagctagcagagcttgctatcagcaag
tgtcaattcagcctggcccaggaatgtctgcaccacgcccaggattacggtggcctgctc
ctccttgccacagcctctggtaacgccacaatggttggcaagctggctgagggggcagag
agggacgggaaaaacaatgtggccttcatgacctacttcttgcaggggaaactggatcag
tgtttggagcttctgatcaggaccaaccgactacctgaggctgccttcctggctcgcacc
tacctgcccagccaggtgtcccgtgtggtgaaattgtggagggagaacctggcgaaggtc
aaccagaaggcggctgaatccttagcagaccctacagagtatgagaatctgttccccgga
ttgaaagaagcctttgcagccgagtattatctgagagagacctgcttgggcacctccagg
cctgcaacggactatcctcttgtcacacccaatgaagacaggaacattcttgaggaggct
gtaggatacgagcccaaaggaaccttcattcctacaaaggatcctgagaagaagaagaag
gaggaggagaaagaggagaagaagaaggaggatgaggaggaagaggaagaggagaaatta
ttatcctcaatggcagaattttctgttgctgctgcagcagcagcagcagcacctgaggcc
gctttacaacctgaacctgctgatcccacagcagtggaggaacaggaggaggaaatacca
gaattttcactcaaagataagactctggacgagctggacgtggaccttgacaacatggag
ctggatgacatcgacaccacagacgttaaccttgatgatgacttcctagatgattaa
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