Hippoglossus stenolepis (Pacific halibut): 118118276
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Entry
118118276 CDS
T08308
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118118276
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118118276
Membrane trafficking [BR:
hsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118118276
Ion channels [BR:
hsp04040
]
Other channels
Mechanosensitive channel (Piezo)
118118276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
CAMSAP_CC1
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
118118276
NCBI-ProteinID:
XP_047198071
LinkDB
All DBs
Position
11:complement(20225652..20288873)
Genome browser
AA seq
2940 aa
AA seq
DB search
MASEVVCGLIFRLLLPVCLAAACLFRYNGLSFVYLIYLLLLPLFAEPSITSMQGHTGRLL
QSLCFTSMSFLLMHIIYQITINSLLAGKSINSDFNCSTWEKSIRQIGFESVIGADAGNGI
RVFIPDIGMFVAGLAIWLLCRSLVQKRPPEDMAQYNADFEAEEQEEEEKLSLDDNILLEE
DFEAGYEAEEDEEFEEEFEEEEEEVEEEQKESTKSKVLRIVAEVASKVKEIIGNLITTAG
KVVVTILLGMTGIMLPSMTSAVYFFIFLFLCTWWSLCRTFDTLIFSCMCVLMAIFSAGHI
IVLYLYQFQFFQESIRPDDGYISTFGISPIVQSNCSCTWKLIVHPERKWYHFVNPIMLLL
LYYTLATLIRLWLQEPIEQLTDDKDGDVCEEEELVGNRTSNSAKGRRQMWWESRQGTDEK
NLLSTQDGISTTEAVPLSNGTSFEFVTTENGPVCLDLYSTPQYKMDQPNEVTEKKDECVY
EVRLPPEESALDEGEEKTEEDEDGIKQRGVSAMVKVFHFIMKQSYICALIAMMAWSITYV
SWLTFVFLMWSCMLWMVRDRRRYAMLSSPFMVAYGNLLIVLQYIWSFEGMGVVPGFFVKK
KNPFHSLSSKVLCLLSFWLLLRQTLTERWEKQKEDSAGLSDVHVVDQEKKEEEESEDRGE
QDTMQVLGNMVMALLIKYWIYICGGMFFIVSFEGTIVMYKIIYMMMFLSCVALYQVHYEY
WRRILKYFWMSVVMYTMLVLTLVYTFQFEGSLEFWSNMLGMDKPSLKDLGLERFSVSMLF
TRIFIPTSFLLVCILHLHYFHDRFLQLTDLQAVVAKEESTIYRLVHQDGSLADLTLLSAS
SVDTALPREPEEVQDKQEEQEVWEMEKEKKQALVVVMDDTDMGGEKPGSLPDLPQSSTEE
SHHCSAGTGPEPSTEQSSDLKNKWHLVVDRLTVLFLKFLEYFHKLQLFIWWMLEIHIIKI
VSCYIVLVSVKEVSLFNYVFLASWAFALPFSQYRPLASSVCSVWTCVIIVCKMLYQLKFI
KPLGYSANCSVSEMYSSVQKTELQTSLLYEGPVDPANWVGLDKSDDLLGYLRNNLLMLAL
LAFEVTIYRHQEYFRLRNKLSPPAARIIFHDTTRQHLDIGIVSFVKYFVNYFFYKFGLET
CLLLVVNVIGQRMDFYGMLHGFALIAVMYRRRRKAIAEIWPKYCCFLACMITVQYFVCIG
IPPAACKDYPWRFPSSFTDSKVVKWLYIPDFRSKPNPSFLIYDFMLLLCASLQRQVFDDE
NKAAVRIMAGDNVEICRDLDAASFSVHNPVPDFIHSRSYLDMLKVIMFSYLFWFVLTIIF
ITGTTRISVFCMGYLVACFYFLLFGGDLLLKPIKKILHYWDFLIAYNIFVITMKNVFSIL
ACGYINTLLQKQCWLIQLLSLACTIKEYKIDTDFEQRHLPFDKRCKVTKDDAGIIWDSIC
FAFLLLQRRVFMSYYFLHVVADIRASQILASRGAELFQATIVKAVRARLEEERKSVEQLK
RQMERIKVRQQKFKRGKERMLSMAQESGEGQTLVQPEDDDDGAHRTKAKTKKKQWWRPWV
DHASMVRSGDYYLFETDSEEEDEEEEKKDDELPKKSAFQFLYHAWITDPKAALRARAKEK
RKFWKKYTKGVRRRKSKKDAAHVAVEVGDSSDGQEKDDNKKSAGPDNIIKRVFNIIKFTW
VLFQTTVDSFTRWLNDMCREYIDISTVLRIERCMLTREVKKGNVPSRESIHVYYQKAMRL
NMSRQASMDQLSEDESVCGSARVRRRRGGYGMESQDSTASRDSISSAVTEATNLFSRQST
LEDLDGMPECIPKTSERARPKLRKMYGLDQSNSSMDSASSFMSSEATQCITLYSRQGTTD
TIEEVEDEQDQGEDKQQVPWESQQLDDSEVPEDGPWGESRETEKDDGEGMEGMEGTDGEE
AVEETDVPKSKEGEEAPWASFGPDEGTSLRVEEAECVPYVQDKDYISESEDGGGQQDLMQ
TEGRMGLIYTPDTDASKASDADVPPSYSKAVSFDRLELSDDESDKDRKRRMIMTSDSHSD
SRSDIMLPSMTTELTASELLLNKMFYDEELEQSETFYQRQPLILQLFYALYNMLVAHSEM
VCYLVIIINHMVSASCATLVLPISIFLWAMLSVPRPSKRYWMTAIVYTEVTIVIKYFFQF
GFLNLSLKGTDKNKPFYLPNIIGVEKKDGYVHYDLVQLLALFFHRSILKCHGLWDEEDPK
EKREPPRQSESSDRDESGKESEAASSVISERMGSTHTLRSLNFGTSIDSGHVQVQFPQQQ
TYQRRKSSSGGSHISHRSLQTSARSKRGSATSHNSSRKDGSEASVHQKTRKQMIIEKLRE
QLYKGKAFIIKRFLEIYIPMRQFFYNLIHPEYSAVTDVYVLMFLSDTVDFIIIVFGFWAF
GKHSAANITSSLSEDQVPGPFLVMVLIQFGTMVVDRALYLRKSVVGKVIFQALLVFGIHF
WMFFILPGVTNKRFSENTVAQMWYFVKCIYFGLSAYQIRCGYPTRVLGNFLTKSHNYVNL
FLFQGFRLVPFLTELRAVMDWVWTDTSLSLSSWICVEDIYAHIFILKCWRESEKRYPQPR
GQKKKKVVKYGMGGMIVMLLICIVWFPLLFMSLVKSVAGVVNKPLDVTFEITLAGFQPIF
TMSAQQKQLQNVTLVEFTKFTKNYTNDDALQWLEGYMPEDLVIAELKGSSNSLWTISPPS
RTHLIEMLNSTEDFPITVTWTIQRNLNLGAKAEIASGKRVTNLNETTKTELVTLLSGTGN
ASSVKLTNMFPRYIRAPSDSDAKPVEQLYEDKDIMMDIILTLKRPESSSDQKQEWWIVDQ
AEPGPIKKRSEGREGLELYVFSDQVSPPSLGFLAGYGIMGLYASVVLVIGKFVREFFSGI
SHTIMFEELPNVDRIHKLCTDIFLVRETGELDLEEDMYAKLIFLYRSPETMIKWTREKTQ
NT seq
8823 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgaggtggtgtgcgggctgatcttcaggttgctgctgcctgtgtgtctcgca
gccgcttgcctgttcaggtacaatggcctgtccttcgtctacctcatctacctcctgctc
ctcccgctctttgcagagccttcaatcacgtccatgcagggccacacagggcgtctgctg
cagtccctgtgcttcaccagtatgtccttcctgctgatgcacatcatctatcagattacc
atcaacagcctcctggccgggaagtccatcaactccgacttcaactgttccacgtgggag
aaatccatccgacaaatcggctttgagagcgtgattggtgcagatgcggggaacggcatc
cgagtgttcatccctgacatcggcatgttcgtggcgggcttggccatctggctgctgtgc
cgcagtctggtccagaagaggccgcctgaggacatggctcagtacaacgctgacttcgaa
gcagaggaacaagaagaagaggagaagctgagcctggacgacaacatcctgctcgaggag
gacttcgaggcggggtacgaggccgaggaggacgaggagtttgaggaggagtttgaggag
gaggaagaggaggtggaggaggaacagaaggagagcacaaagagtaaggtcctgcggata
gtcgcggaggttgcgtccaaagtgaaggagatcatcgggaacttgatcaccaccgcgggg
aaggtggtggtcaccatcttgttgggaatgacgggcatcatgctgccgtccatgacctct
gccgtgtacttcttcatcttcctgttcctgtgcacctggtggtccctgtgccgcaccttc
gacacgctcatcttcagctgcatgtgcgtcctgatggccatcttcagcgccggacacatc
atcgtgctctacctctaccagttccagttcttccaggagtccatccgaccagacgacggc
tacatcagcacgtttggcatctcccccatcgtccagagcaactgctcctgcacatggaag
ctcatcgtgcacccggagcgtaagtggtaccactttgtgaatcccatcatgctgctgctt
ctctactacacgctggccacgctcatccgcctctggctgcaggagcccatcgagcaactg
acggacgacaaagacggggatgtgtgcgaggaggaggagctcgtcggaaacagaaccagt
aactcggccaaagggaggaggcagatgtggtgggagtcacgccaaggaactgatgagaaa
aacctcctctccacccaggacggcatcagtacgactgaggctgtgccactctccaacggg
acgtcctttgagtttgtcacaactgagaatggaccggtctgtctggacttgtactccacc
ccccagtataaaatggaccagcccaacgaagttacagagaagaaggatgagtgtgtgtat
gaagtgcgtttacccccggaggagtcggcgctggacgaaggagaagagaagaccgaggag
gacgaggacgggatcaagcagcgaggagtcagcgcgatggtcaaagtctttcacttcatc
atgaagcagagctacatctgtgccctcatagccatgatggcgtggagcatcacgtacgtc
agctggttgacgttcgtcttcctcatgtggtcctgcatgctgtggatggtgagggaccgg
cggcgctacgccatgttgtcgtctcccttcatggtggcctacggcaacctgctgatagtt
ctgcagtacatctggagtttcgaggggatgggagtagtcccggggttcttcgtcaagaag
aaaaaccctttccactcactttcctccaaggtcctgtgtctgctgagcttctggctgctg
ctcagacaaacgctaacagagagatgggagaaacaaaaggaagacagcgctggactctca
gacgttcacgtggtggatcaggagaagaaagaggaggaggagtctgaggaccgaggcgag
caggacaccatgcaggtcctgggcaacatggtcatggctctgctgatcaaatactggatc
tacatttgtggggggatgttcttcatcgtcagcttcgagggaaccatcgtcatgtacaag
atcatctacatgatgatgttcctctcctgtgtggcactttaccaggtgcactatgagtac
tggcgaaggatcctgaagtacttctggatgtcggtggtgatgtacaccatgctggtcctc
acgctggtctacaccttccagtttgaaggctcgctggagttctggtccaacatgttgggc
atggacaagccgagcctgaaggatttgggcctggagcggttcagtgtgtccatgttgttc
accaggattttcatccccacctctttcctgctggtgtgtatcctccacctgcactacttc
cacgaccgcttcctgcagctcactgacctccaggctgtcgtggccaaagaggagagcaca
atctacagactggtgcaccaggatggcagtctggcagacctcaccttgctcagcgccagc
tcggtggacacggcgctgcccagagagccggaggaggtgcaggacaagcaggaggagcag
gaggtgtgggagatggagaaggagaagaagcaggccctggtggtggtgatggacgacact
gacatgggtggcgagaagccaggcagcttgcccgacctgccgcagtccagcacagaggag
agccaccactgcagtgcggggaccgggccagagccgagcaccgagcagagctcagatctg
aaaaataagtggcacctggtggtcgaccgtctgactgtgctcttcctcaagttcctggag
tatttccacaagctgcagctgttcatctggtggatgctggagatccacatcatcaaaata
gtgtcctgctacatcgtcctggtctctgtcaaagaggtgtctttgttcaattacgtgttc
ctggcgtcttgggccttcgcgctgccgttcagtcagtatcggccgctcgcctccagcgtc
tgcagcgtgtggacgtgtgtcatcatcgtgtgtaaaatgttgtaccagctgaagttcata
aaacccctaggctactccgcgaactgctctgtgtcggagatgtactccagcgtccagaag
actgagctgcagacatctctgctgtatgagggacctgtggatccggccaactgggtggga
ctggacaaatctgatgacctgctgggatacctcaggaacaacctgttgatgttggctctc
ttagcgttcgaggtgaccatctaccgccatcaggagtacttcaggctgaggaacaagctg
tcgccccccgctgctcgcatcatcttccacgacaccacgcggcagcacctggacatcggc
atcgtcagcttcgtcaaatacttcgtcaactacttcttctacaagtttggactcgagacg
tgccttctgctggtggtcaacgtcatcggtcagcggatggacttctacggcatgcttcat
ggcttcgccctgatagccgtcatgtaccggcgacggaggaaagccatcgcggagatctgg
cccaagtactgctgcttcctggcctgcatgatcaccgtccagtactttgtttgcatcggg
atcccgcctgcagcctgcaaagactacccctggaggtttcccagctctttcacagactcc
aaagtggtcaagtggctctacatcccagatttccgctccaagcccaatccgtcgttcctc
atctatgacttcatgctgctgctgtgtgcctctcttcagaggcaggtgttcgatgacgag
aacaaggcggccgtccgcatcatggccggagacaacgtggagatctgcagagacctggac
gcagcctcgttcagcgtccacaaccccgtccctgactttatccacagcaggtcctacctc
gacatgctgaaggtcatcatgttcagttacctgttttggttcgtcctcaccatcatcttc
atcacgggaaccacgcgtatcagcgtcttctgcatggggtacctggtcgcctgcttctac
ttcctgctcttcggcggagacctgctactgaagccaatcaaaaagatcctgcattactgg
gacttcctcatcgcctacaacatctttgtgatcaccatgaagaatgttttttccattctg
gcttgtggctacatcaacactctgctccaaaagcagtgctggttgatccagttgctcagt
ttggcctgcaccattaaagaatataaaatcgacaccgacttcgaacagagacatctgccc
tttgataagcgctgcaaggtgaccaaagacgacgccgggatcatctgggacagtatctgc
ttcgccttcctgctgctgcagagacgagtcttcatgagctactacttcctgcacgtggtc
gccgacatcagagcgtcgcagatcctcgcatccagaggagctgagctcttccaggccact
atagtgaaggcggtgagagcccgactggaggaggagcgcaaatctgtggagcagctgaaa
agacagatggagcgcattaaagtgaggcagcaaaagtttaagcggggcaaggagaggatg
cttagcatggcgcaggagtccggagaaggacagacgctggtgcagcccgaggacgatgac
gacggggcacatcgaacgaaagccaagaccaaaaaaaagcagtggtggaggccgtgggtt
gaccatgcttccatggtcagaagtggagactattacttgtttgaaacggacagtgaggag
gaagatgaggaggaggagaaaaaagacgacgagcttcccaaaaagtcggcgtttcagttc
ctttaccacgcctggatcacagaccctaaagctgcactcagagctcgagcaaaagagaaa
cgcaaattctggaagaaatacacaaagggagttagacgcaggaaaagtaagaaagatgca
gctcatgtggctgtagaggttggtgactcgtctgacgggcaagaaaaagacgacaacaag
aagtctgctggaccagacaacatcatcaaacgcgtgttcaacatcataaagttcacgtgg
gtcctcttccagacgacggtggacagcttcaccaggtggttgaacgacatgtgcagagag
tacatcgacatctccacggtgctgcgcatcgagcgctgcatgctgacgcgagaggtcaaa
aagggtaacgtgccgtccagagagagcatccacgtctactaccagaaggccatgaggctc
aacatgtccaggcaggccagtatggatcagctgagtgaggacgagtcggtctgcggctcc
gcccgagtgcggaggaggcgaggaggatacggcatggagagccaggactcgacggcctcc
agagacagcatatccagtgccgtcactgaggccaccaacctgttttcgcgccagtccacg
ctggaggacctggacggcatgccggagtgcatccccaaaaccagcgagcgcgccaggccc
aagctgcgtaagatgtacggcctggaccagtccaactcctcaatggacagtgccagcagc
ttcatgtccagcgaagcgacccagtgcatcactctctactccagacagggaaccacagac
actatagaagaagtggaggatgagcaggatcaaggggaggacaagcagcaggtcccctgg
gagtcccagcagctggatgacagtgaggtgcctgaggacggtccctggggtgaatccagg
gagacagagaaggatgacggcgaggggatggaggggatggaggggactgacggtgaggag
gctgtggaggagacagatgtaccaaagagcaaagagggagaagaagctccctgggcgtct
tttggcccagatgagggcacttccctcagggtggaggaggcagagtgtgtcccttatgtc
caggacaaagactacatctctgagagtgaagacggaggaggacagcaggacctgatgcag
acagaggggcggatgggactgatctacacccccgacacggacgcttccaaagcgtctgac
gctgacgtgcctcccagctacagcaaggcggtcagcttcgaccgtctggagctgagcgac
gacgagagtgacaaggacaggaagcggcgtatgattatgacctcagacagccactctgac
agcaggtcagacatcatgttaccgtccatgaccaccgagctgaccgccagtgaactgctg
ctcaacaagatgttttatgacgaagagctggagcagtcagagactttttaccaaaggcag
ccgctgatcctccagctcttctacgccctctacaacatgctggtggcgcactctgagatg
gtgtgctatctggtcatcatcatcaaccacatggtgtccgcgtcctgcgccaccctggtc
ctccccatctccatcttcctctgggccatgctgtctgtgccgaggcccagcaagcgctac
tggatgactgccatcgtctacactgaggtcaccattgtcatcaagtacttcttccagttc
ggcttcctcaacttaagcctaaaagggaccgataagaacaaaccattttaccttcccaac
atcatcggggtggagaagaaggacggttatgtccactacgacctggttcagttactggct
ctcttcttccacagatccattctgaagtgccacgggctgtgggacgaagaagaccccaag
gagaagagggagcctcctcgtcagagcgagtcctcggaccgggacgagagtgggaaggag
tctgaagctgcctcctcggtgatcagtgagaggatgggctccactcacaccttgaggtcc
ttaaactttgggacctccatagattccggacacgtccaggtgcagttcccgcagcagcag
acctaccagcgtcgcaagagctccagtggaggctcgcacatctctcaccgatcacttcag
acgtctgccagatcaaaaagaggaagcgccacttcccacaacagcagccgcaaggacggc
agcgaggccagcgtccaccagaagacccgcaaacagatgattattgagaagctccgagag
cagctctataaaggaaaagccttcatcataaagcggttcttggagatctacattcccatg
aggcagttcttctataacctgatccatccagagtacagtgccgtcacagacgtgtatgtg
ctgatgttcctgtccgacactgtggacttcatcatcattgtgtttggattctgggcgttt
ggtaaacactcagcggcaaacatcacctcgtctctgtcggaggatcaggtgccgggacct
ttcttggtcatggtcctgatccagttcgggaccatggtggtggaccgggccctttacctc
agaaagtctgttgtgggcaaggtcatcttccaggctctcctggtgtttggaatccacttc
tggatgttcttcattctgccgggagtcactaacaagcgtttcagtgagaacacggttgct
cagatgtggtattttgtcaagtgcatctacttcggcctgtcggcctatcagatccgctgc
ggttatcccacccgcgttctgggaaacttcctcaccaagagccacaattatgtcaacctc
ttcctgtttcaaggtttccgcctggtgccgtttctgacggagctgcgtgccgtgatggac
tgggtttggaccgacacctcgctgtctctgtccagctggatctgtgtggaggacatctac
gctcacatcttcattctgaaatgctggagagagtctgagaagaggtacccgcagccccga
ggccagaagaagaagaaggtggtgaagtacgggatgggagggatgatcgtgatgctgctg
atctgcatcgtctggttcccgctgctttttatgtctctcgtcaaatcggtagctggagtt
gtcaacaagccgctggacgtcacgtttgaaatcaccctggctggttttcagcccatcttc
actatgagcgctcagcaaaaacaactgcagaatgtgacactggtggaatttacaaaattt
accaagaattatacaaacgatgacgccctgcagtggctggagggctacatgccagaggat
ctggtcatcgctgagctgaaaggcagctccaactctctgtggaccatcagcccccccagc
agaacccacctgatcgaaatgctgaactccactgaggacttccccatcactgtgacctgg
accattcaaagaaacctcaatctcggtgccaaggctgaaatagcatctggaaaacgagtg
acgaatctgaacgagacaactaagacggaactcgtaactctcctgagtgggacaggaaat
gcttcaagtgtgaaactaacaaacatgtttcctcgttatatccgagcccccagtgactcc
gatgccaaacctgtcgagcagctttatgaagataaagacattatgatggacataattttg
acgttgaagcgaccagagagttcctccgatcagaagcaggaatggtggatcgtcgaccag
gcggagcccggcccgataaagaagaggagtgaagggcgtgaagggctggagctttacgtg
ttcagcgaccaagtcagtccgcccagtttgggattcctggctggatacgggatcatgggc
ctgtacgcctcggtcgttctcgtcatcggcaagtttgtgcgcgagttcttcagcggcatt
tcccacaccatcatgttcgaggagctccccaacgtggatcgcatccacaagctgtgcacc
gacatcttcctggtccgagagacgggggagctggacctggaggaggacatgtacgccaaa
ctcatcttcctctaccgctcgccagaaaccatgatcaagtggacccgggagaaaactcag
tga
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