Hippoglossus stenolepis (Pacific halibut): 118118310
Help
Entry
118118310 CDS
T08308
Symbol
asic1c
Name
(RefSeq) acid-sensing ion channel 1C isoform X1
KO
K04830
acid-sensing ion channel 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118118310 (asic1c)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
118118310 (asic1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
118118310
NCBI-ProteinID:
XP_035027273
LinkDB
All DBs
Position
11:16375579..16465190
Genome browser
AA seq
575 aa
AA seq
DB search
MKGSSEESIESTRPSNLQAFANMSTLHGMSHIFAYGHMTFRRFLWTLSFLGSLGLLMLVC
MDRVSYYLEYPHVTKLDEVAATNLTFPAVTFCNLNEFRFSKITRNDLYHVGELLALLNNN
YQIANPHLAEPEVLAALKDKANFQNFKPKLFNMTDFYNRTGHDIGEMLLQCTFRGEDCYP
VNFSTIYTRYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGETDETSY
EAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLQYLPPPWGDCKSTPIDSEYFS
TYSITACRIDCETRYLLENCNCRMVHMPGTSTVCTPEQYKDCADPALDFLVEKDNDYCVC
QTPCNMTRYGKELSMVKIPSKASAKYLAKKFNKTEQYIGENIMVLDIFFEALNYEKIEQK
KAYEIAGLLGDIGGQMGLFIGASVLTILEIFDYLYEVFKDKVLGYFTRKKRPQRCQSDNL
MTVDVKHKPLEISHHSKANDWTSLVVTTFYGSTFNFLTLLRTVCVCVHCSGVIRDNECFL
QEEPETLSKWEFYLSGKEKQTDKKKQKGEISGVAS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaagctcagaggaaagcattgaaagcaccaggccttcaaacctgcaagctttc
gctaacatgtccaccctacatggcatgagtcacatattcgcctatggacacatgacattc
cgccggttcctttggactctttctttcctgggctctctgggcttgttgatgctcgtctgc
atggatcgagtgtcctattacctggagtatcctcacgtcaccaagctggacgaggtggct
gcgacgaacctcaccttcccagcagttaccttctgtaacctcaacgagttccgcttctcc
aaaatcaccaggaatgacctctatcatgtgggagagctgctggccctcctcaacaataac
taccaaatagccaacccacacttggctgagcccgaggttctggctgcccttaaggataaa
gcaaactttcagaacttcaaacccaagctgttcaacatgactgatttctataaccgcaca
ggtcatgacatcggtgaaatgctactgcagtgcacctttcgaggggaggattgctaccca
gtgaatttcagcacaatttacacacgctacggaaaatgctacacgttcaactcgggatta
gacggcaaccctctgttgaccacgttaaaaggtggcaccgggaacggcctggagatcatg
ttggatatccagcaggatgaatacctccctgtctggggagagacagatgagacctcctac
gaagcaggcatcaaggttcagatccacagccaggatgagccgcccttcattgaccaactg
ggatttggtgtggcccctggttttcaaacttttgtgtcatgtcagcagcaactgcttcag
tacctccctccgccgtggggcgactgcaagtctactcccatagactctgagtacttctcc
acgtacagcatcaccgcctgccgtattgactgtgagacccgctacctgctggagaattgc
aactgcaggatggttcacatgccggggacttctacagtttgcacacctgaacagtacaaa
gactgtgctgacccggctttagattttttggtagagaaagacaacgattactgtgtctgt
cagacgccctgcaacatgacccgctatggcaaggagctgtccatggttaagatccccagt
aaggcctccgctaagtatctggctaagaaattcaacaaaactgagcaatatatcggagaa
aacattatggtcttggacatctttttcgaggctctgaattacgagaagattgagcagaag
aaggcctatgaaatcgcggggctcctcggtgacattggaggtcagatggggctgttcata
ggagccagtgttttaacaatactggaaatatttgactacctatatgaggtgtttaaggat
aaggttttgggttacttcacacgcaagaaacgacctcagcgttgccagagcgacaatctg
atgactgttgatgtgaagcacaaacccttggagatcagccatcactcgaaagccaatgac
tggacgtctctggttgtgactaccttttacggatcgacttttaactttctcacactgttg
cgcaccgtgtgtgtgtgtgttcactgctccggcgttatcagggataacgagtgttttctc
caagaggagccagagactttgtccaaatgggaattttacctttcaggaaaagaaaaacaa
acagacaaaaaaaaacaaaagggtgaaatcagtggcgttgcgtcatga
DBGET
integrated database retrieval system
