Hippoglossus stenolepis (Pacific halibut): 118118330
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Entry
118118330 CDS
T08308
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118118330 (kcnn1a)
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
118118330 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
Motif
Other DBs
NCBI-GeneID:
118118330
NCBI-ProteinID:
XP_035027349
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Position
11:complement(9899978..9951117)
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AA seq
1027 aa
AA seq
DB search
MRHRCAGAVHQHQTPDEKQASSKKSRDPDAPVFSLPPPPSSHHHRDRTPTTAAQRQSLQE
LPCLSQPTGRPVHSGDPLPLARYDTAQRPSHRAAEPSTGQPAHLQQDPWAPAGSQQQQQP
PPTQEKPPVFPSCHCSFSEQEASLSQNQHHPVDPLPPQPSPPFPPPIPPPPTSSSSSLLF
SRESKRGDRLPSSANNYYQQASIVERCRGGGGAGGHRDHRQLQQQQQHQQQQQQQQQQQQ
HSNLRLQQRDPSPEGIRANSQKGRSLNVCESTEANRRAFESQDLQQQQIPQLRAQQQLLV
GSSLPINYCASGSGELCRTHQAPLLQQQQQEQQKQQQQQQQQQQQQQGALELCPQRPPQQ
QQQQQQQHCEQDRNKSGRIGEQAQPHSRDSRVTPPVTQQAYAGNSSATGSNSSKDSPNYG
SSYHLWPESPHKGEERIRIDLHKATTEQKKLSHAGSKPSLSESSGRLPQIAMNTCKYNGG
VVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGGEDPSKASNESLVREG
SVRVGGRAPQKKNRDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYT
KESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLEL
LVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFT
DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEV
TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK
AEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQ
AQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDSVT
GSLQALPCLISQAITQQQQEFLDGFVHRFRPASLASERSERSERSWTSTARRRRSPSTAP
HTSSDSG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtgcgcgggagctgtccatcagcaccagacgcccgacgagaagcaagcg
agcagcaagaagagccgagacccagacgctcctgttttcagcctgccgcccccgccctct
tctcaccaccaccgagaccgcactccgaccaccgccgctcagcgccagagcctccaggag
ctcccctgtctgagccagcccaccgggagacccgtgcacagcggcgaccctctacccctg
gcgcgatacgacaccgcccagcgaccttcacaccgagccgctgaacccagcaccgggcag
ccggcgcacctgcagcaggatccctgggccccggccggctcccagcagcagcagcagccg
ccgccgacgcaggagaagccgcctgtttttccgagctgccactgcagtttttccgagcag
gaggcgagcctttcacaaaaccagcaccatcctgtcgatcctctcccaccgcagccctcc
ccaccttttccgccgcctataccgccgccgccgacctcctcctcctcctctctgctgttt
tccagagaatctaaaaggggggatcgtctcccgagcagcgctaataattactaccaacag
gcaagcatcgtggaacgctgcaggggaggaggaggagcaggagggcaccgagaccacagg
cagttgcaacagcagcagcagcatcagcagcagcagcagcagcaacagcagcagcagcaa
cacagtaatttaagactccaacagagggacccctcccctgaaggaatccgtgcaaactca
cagaaagggcgctctttaaatgtatgtgagtcaaccgaggctaacaggagagcattcgag
tctcaggacctgcagcagcagcagatcccacaattacgagcgcagcaacagctactggtg
gggagcagcttgcctatcaactactgcgccagcggctcaggagagctatgtaggactcac
caggctccactgctgcagcagcaacagcaagagcagcagaagcagcagcagcagcagcag
cagcagcagcagcagcaacaaggtgcactggagctctgtccccagcgtccgccgcagcag
cagcagcagcagcagcagcagcactgtgaacaagaccgcaataagtctgggaggatcggc
gagcaggcgcagccacacagccgcgactcccgcgtcacccccccggtaacacaacaggcg
tacgcggggaactcttctgcgaccgggagcaacagcagcaaagacagccccaactacggc
tccagctatcacctgtggccggagagcccgcataaaggcgaggagaggatacgcatcgac
ctccataaggccactactgagcagaagaagctgagccatgctggatccaagccctccctc
tctgagagcagcggccgactccctcagatagccatgaacacctgcaagtacaatggcggg
gtggtgagaccactagttggcagcctggcgtcatcgtcgcgccgcaatctcgcggagctc
gactcggagacgcagcccttgcagacgctgcacagctctggcctggaggtggtggtgtcc
aagggcaacggcggcgaagaccccagcaaggcgtccaacgagagcttggtcagggagggc
agcgtgcgtgtcggtggcagggcgccgcaaaagaagaatagggacattggctacaggctt
ggccacaggagggcgctgtttgagaagcgaaagcggctcagcgactacgcgctcatcttc
gggatgtttgggattgttgtcatggtgacagaaacggaactgtcatggggggtttacact
aaggaatcttcatactcatttgcactgaaatgccttatcagcctttccactgttatattg
cttggtcttataataatgtaccatgcccgggaaatccagctgtttatggtcgacaatggt
gcggacgattggaggatagccatgacgtatgagcggatcttcttcattgtgctagagctg
ctggtgtgtgccatccatcccataccaggccagtacgtgttcacctggacggcgcggctg
gccttcacctacacgccgtcagtggccgacgctgacgtggacatcatcctctccatcccc
atgttcctgagactctacctgataggcagggtcatgttgctccacagcaagctgttcacg
gacgcttcgtctcgcagcatcggcgccctcaacaagatcaacttcaacacacgctttgtc
atgaagaccctcatgaccatctgtccaggaactgtcctgctggttttcagtatatcctcc
tggatcattgctgcatggactgtgcgcgtctgcgagaggtatcatgacaaacaggaagtg
acgagtaacttcctgggagccatgtggctcatctcgattaccttcctctccattggctac
ggggacatggtaccgcacacgtactgtgggaaaggcgtgtgtctgcttacagggatcatg
ggagccggttgcactgcgctggtggttgcagttgtagccaggaagctggagctgaccaag
gccgagaagcacgtccacaacttcatgatggacacacaactctgcaaacgagtaaagaac
acagctgccaatgtactcagggaaacatggctcatctacaaacacaccaagttggtcaaa
aagatagatcacgccaaggtgcggaaacaccagcgcaagtttctccaagccattcaccaa
gctcaaaaactgcgcagtgttaagatggagcagaggaaactcaatgaccaggccaacacc
ttggtggacctggcaaagacccagaatgtgatgtacgacctggtgtcagagctgcaggag
cgcagtgaggagctggacaagcgcatcggcacattggaggacaagctggactcggtgacg
ggcagcctgcaggcgctgccgtgcctcatttcccaagccataacccagcagcagcaggaa
ttcctggacggcttcgttcaccgctttcggccggcctcgctagcctctgagcgctccgaa
cgctcggaacgatcctggacttccaccgcccgcaggaggcgctcgccctccacagcacca
cacacctcctcagatagtggatga
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