Hippoglossus stenolepis (Pacific halibut): 118118335
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Entry
118118335 CDS
T08308
Symbol
astn1
Name
(RefSeq) astrotactin-1 isoform X1
KO
K24479
astrotactin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118118335 (astn1)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118118335 (astn1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
fn3
TM_ErbB1
NDNF
Pur_ac_phosph_N
MACPF
Motif
Other DBs
NCBI-GeneID:
118118335
NCBI-ProteinID:
XP_035027359
LinkDB
All DBs
Position
11:4162853..4586700
Genome browser
AA seq
1324 aa
AA seq
DB search
MASITNMGQRPLLLLLLPGLLWLLLAVHTASVRCLNGDEDQNQDSECKMKSVTVSALPFL
RENDLSIMHSPSASEPKLLFSVRNDFPGDVVVVDDLENTELPFFVLEISGNSEDIPLVRW
RQQWLENGTLLFHIHHQDGSLNLPEPTVDPASDSAKEELRILHISVMGGMIALLLSILCL
VLILYTRRRWCKRRRIPQPQKSASAEAANEIHYIPSVLMGGQARESLRNSRGQGPNSSGT
LSIRETPILDGYKYEYDITDLRHHLQRECMNGGEEFASQVTRTLDSLQGCNDKNNMDLTP
VSDNTKLALMNKYKDNIIATSPIDSNHQQNTLLPHNTSTSQRKRLSSNTRAGSTFLNPDG
DSGTEADSEPQLAFYTDPNRSRRRTRGMRNGNANSAWGSGAGSPRSPINKTTLTLISVIS
CVIGLVYSSHLSCSISVRVVLHVPEHLIADGSRFILLQGSQLDASDWLNPAQILLYYQQN
ASGPWVNELCGRRLLDPCEHQCDQDTGDCLCLDGYMKDPVHKHLCIRSEWGPNQGPWPYT
IFQRGFDLVMGEQPSDRIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVME
DAVDVREELMISSSFDSLEVLLDSFGPVRDCTKDNGGCSRNFRCISDRKLDSTGCVCPPG
LSPMKDGSGCYDHHIGIDCSDGFNGGCEQLCLQQLAPLEDDPTLYNIQMFCGCIEDYKRG
PDGRSCLPLSEACTEGIDCGEALDIPANQTVFGDLFYGYNNHSKESTSGQILKATFRQKN
FARGIEQQLPDGMVVASVPTEVQCHEELSDPVPDPEYLTGMVNYSEVSGYPLVQHWSLRS
VLYHVKLNQWVLSQAFSSAIHSLDGATQRSDFVSILREFGNHYVQEAVYGFQESCTIWYP
NKQVQRQLWLEYQDISKGNSPSEESEERDKEPRTLTYPAYVASLLDTGAKRMAAGVRMDC
TSQGQCPRSCHLCHMSPRAAQGRQQSEPVLLQITKSAPIYELVSNNETYQSLQEAMMSML
WCSGKGNVIDDWCRCDSSAFGTDGLPTCAPLPHPMLKLSYTYEPSSSLVILEWNHTEPPI
GVRIVDYLISQEKVTERTDHSKVETETLLSFVDDILSGARSPCVMLGDIPNLLSSSVSMI
IRCLEPDTTYMFRLWAVDNTGRRSSPSEVTIKTPCPTVDDVKAQEIADKIYNLFNGYTSG
KEQQTAYNTLMDLGAPTLHRVLYHYNQRYESFGEFTWRCEDELGPRKANLILSQLEELSH
WCKGLLQEPKIGLRRMSLKFLSCRYTDTKAFGLNWADMGQDVHKACDEQTLTVMYNDYGE
PKEL
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatcaccaacatggggcagagaccgctgctgctgctgctgctgccggggctg
ctgtggctgctcctggccgtccacaccgccagcgtccgctgcctgaacggcgacgaggac
cagaaccaggacagcgagtgcaagatgaagagcgtcaccgtgtcggcgctgcctttcctg
cgggagaacgacctgagcatcatgcacagtccgtcggcctccgagcccaagctgctgttc
tccgtgcggaacgattttcccggggacgtcgtggtggtggacgacctggagaacaccgag
ctgcccttcttcgtcctggagatctccgggaactcagaagacatccctctggtgcgctgg
aggcagcagtggctggagaatggcactctgctcttccacatccaccaccaggacggcagc
ctgaacctcccagaaccgacagtagaccccgccagcgactctgccaaggaggagctgcgc
atcctgcacatctccgtcatgggcgggatgatcgcccttctgctgtccatcctgtgtctg
gtcctgatcctctacacccgcaggcgctggtgtaaacgccgccgcatccctcagccccag
aagagtgccagtgctgaggcggctaatgagatccactacatcccctcggtgctgatggga
ggccaggcccgggaaagcttgaggaactcccggggtcaggggccaaactccagcggcact
ctcagcatccgggagactccgattctcgacgggtacaagtatgagtacgacatcaccgac
ctgcgtcaccatctgcagcgggaatgcatgaacggcggtgaggaatttgccagccaagta
acccgcaccctggactccctccagggctgtaatgacaagaacaatatggaccttacgcct
gtgagtgataacaccaagctggctctgatgaacaaatacaaggacaacatcatcgccacg
agtcccatcgacagcaaccaccagcagaacaccttgctgccacacaacacctccaccagc
cagcgcaagcgtctctccagcaacacccgcgcgggttcaactttcttgaacccagacggg
gactctgggacggaggccgacagcgagcctcagctggccttttacaccgacccaaaccgc
agtcgccgccggactcgaggtatgagaaatggtaacgccaacagcgcgtggggctcaggg
gcaggttccccacgaagccccatcaataagaccaccctgactctgatcagtgtcatcagc
tgtgtgattggcttggtttactcctctcacctctcctgcagcatttcagtccgagtggtc
ctccatgtgccggagcacctcatcgccgatggatcgaggttcattttgctgcaggggagc
cagttggacgcctccgactggctgaaccctgcccagatcttgttgtactaccagcagaac
gccagcgggccctgggtcaacgagctgtgtggacgacgcctcctggacccctgtgagcac
cagtgtgaccaagacacaggagactgcctctgcctggacggctacatgaaggacccagtc
cacaagcacctctgcatccgcagtgagtgggggcccaaccagggtccctggccttacact
atcttccaacgcggttttgatcttgtgatgggagaacaaccctctgatcgcattttcagg
ttcacatacaccttaggagagggaatgtggctgccattgagtaaaagctttgtcatcccc
cctgccgagcttgccatcaacccctcagccaagtgcaagacggacatgacggtcatggag
gacgcggtggacgtacgggaggagttgatgatcagttcatcctttgattcattggaggtt
ctgctggactcgtttggacccgtcagagactgcaccaaagacaacggaggctgcagccgc
aacttccgctgcatatctgacagaaagctggactccactggatgtgtgtgccctccgggg
ttgagtcctatgaaggatgggtccgggtgctacgaccaccacatcggcatcgactgctcc
gacggtttcaatggcggctgcgagcagctgtgtctccagcagctggcccctctggaggat
gacccgaccctttacaacatccagatgttctgtgggtgcatcgaggactacaagcgtggt
ccagatggaaggtcgtgcctgccgctgtctgaggcctgcactgaggggatcgactgtggg
gaagcgctggacattcccgctaaccagacggtgtttggagaccttttctatggatacaac
aaccacagcaaggagagcacatccggacagatcctcaaggccacgttcaggcagaagaac
ttcgcccgaggcatcgagcagcagctcccagacggcatggtggtggcatcggtgccaact
gaggttcagtgccacgaggagctgtcagaccccgtgcccgacccagaatacctcacaggt
atggtgaactacagtgaggtgtctggctacccccttgtccagcactggagtctccgctct
gtgctctaccacgtcaaactcaatcagtgggtcctctctcaagccttcagctcagccatc
cattctctggacggggcgacgcagcggagtgactttgtctccatcctcagggagtttggg
aaccactacgtacaggaggcagtgtacggcttccaggagtcctgcaccatctggtacccc
aacaagcaggtccagaggcagctgtggctggagtaccaggatattagcaaagggaactcg
ccttcagaggagtcagaagagcgtgacaaggagcccaggacgctgacctatcctgcatat
gtcgccagcctgctggacacaggtgcaaagcggatggcagccggtgtccggatggactgt
accagccagggccaatgcccccgctcgtgccacctctgccacatgagcccgagggcggca
caggggcggcagcagtctgagcccgttctgctgcagattacgaagtctgcacccatctac
gaattagtgtccaacaatgagacataccagtctcttcaggaggcaatgatgagcatgctg
tggtgttcagggaagggcaacgttatcgatgactggtgtcgctgtgattccagcgctttt
ggcacagacggactgcccacctgtgccccacttccccacccaatgctgaagctgtcgtac
acctacgagcccagcagctcattggtcatcctggagtggaaccacacggagccgccaatc
ggtgtccgcatcgtcgattacctcatcagccaggagaaggtgaccgagaggaccgaccac
tccaaagttgagacagaaaccttactgagctttgtggacgacatcttgtctggggccagg
tctccatgtgtgatgctgggggacatccccaacctgctgtcctcttcagtcagtatgatc
attcgctgcctggaacctgacaccacgtacatgttccggctgtgggcagtagacaacaca
gggcgccgttccagtcccagtgaggtcaccatcaaaactccgtgtccaactgtggatgac
gtcaaagctcaagaaatagccgacaagatctataacctgttcaacggctacaccagtggg
aaggagcagcagacggcctacaacactctgatggacctgggcgcccccacgctgcaccgt
gtgctctaccactacaaccagcgctacgagagcttcggtgaattcacctggaggtgcgag
gacgagctgggacccaggaaggccaacctcatcctctcccagctagaggagctctcccac
tggtgtaagggtcttctccaggagccgaagatcggccttcgcaggatgtccctcaaattc
ctgtcctgccgctacaccgacaccaaggccttcgggctgaactgggcggacatgggccag
gacgtgcacaaggcctgcgacgagcagacgctcactgtcatgtataacgactacggtgag
cccaaggagctgtaa
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