Hippoglossus stenolepis (Pacific halibut): 118118342
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Entry
118118342 CDS
T08308
Name
(RefSeq) semaphorin-6B
KO
K06842
semaphorin 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
118118342
NCBI-ProteinID:
XP_035027381
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Position
11:11219626..11249992
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AA seq
900 aa
AA seq
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MCAAAMATAATPLTFLLLLLRLADGSFPEEPSPLSYVPVEVVRRYPVFLGRAHRSAQRQE
LHIQTVLQVNRTLYIGARDDLYRVELDNMAGDEMFYSKKRTWESNKNDIRVCRMKGKHEG
ECRNFIKVLLSQHGGLFVCGTNAFNPLCANYTRDTLEMVGEPVSGMARCPYDPRHANVAL
FADGSLFTGTVTDFLAIDAVIYRSLGDTPALRTVKHDSKWFREPYFVSAMEWGPHIYFFF
REMAMEFHHLEKVMVSRVARVCKSDLGGSQRVLEKQWTTFLKARLNCSVPGDSHFYFNLL
HATSNIIHMQGRDVILGLFSTPPNSIPGSAVCVFDMQQLAHAFEGRFKEQKSPESIWTPV
SDDLVPKPRPGGCAVQGSRFSSSNTLPDEVLNFVKTHPLMDETVPLLGHRPWVVKTMGRY
QLTAMVVDTEAGPHKNRTVLFLGSTRGTILKFLMVPSGDSVSHSSVFLEEVEGFNPEKCG
EDSPQARQLVSLSLDQTSHSLLLAFSSCLVRVPTSRCHLHSRCMKSCLASRDPYCGWTRG
STCSFLRPGTRLPFQQDVEYGNTTSHLGDCDGILQQSLLIEPESLVSLNLLVASAVSAFT
IGAALSGLAVCWIMAHKPANRRHGNASQSSIQRRERGLLTNGGGGMGGSVLSVTRQGGGE
RPCSQGGETLFVMPNGWVKSGELDPGFLPTPEHTPQQKRRGLRLSDSNSGGWDTSQTYLG
GGSVGLGSPCRMPPSVYLTTRLFQQGVVGRHAGEGRVIDTPRQHYVCLSKQEKGMKGTPK
APLRKSAGEYVYPMTPQDSPERRRVVSAPSAAMEYNDPLPLRWPAQEGYILSSHGMVPVP
MPPPSMPAPSVQAYVSQQHTPGLSRALLRGALERGELGELVDLSHLMCKKNCSDRTQTGQ
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctgctgccatggcaaccgcggccactcccctcacatttcttctgttgctgctt
cgactcgctgatggctcattcccagaggagcccagtcccctcagctacgtccctgtagag
gtggtgagaagatatccagtgttcctgggcagagctcatcgttccgctcagcgacaggag
ctgcacatccagacggtcctccaagtcaaccgcacgctctacataggagccagagatgac
ttatacagagtggagctggataacatggccggtgatgagatgttctacagcaagaaacgg
acgtgggaatccaataagaacgacattcgagtgtgccggatgaagggcaaacacgaggga
gagtgccgtaatttcatcaaggttctgctcagccagcacggtggcctgttcgtgtgtgga
acaaatgccttcaacccactgtgtgccaattacactagagacaccctcgaaatggtggga
gagcctgtcagcgggatggcacggtgcccgtatgatccacgacacgccaatgtggcttta
tttgcagatggaagtctctttaccggcaccgtgacagacttcctcgccatcgatgcggtg
atctatcggagcctcggcgacacccccgccctccgcacggtcaaacacgattccaagtgg
ttcagagagccttactttgtgagcgctatggagtgggggcctcatatttatttcttcttc
agagagatggcgatggagtttcatcatctagagaaggtgatggtgtcccgtgtggcccgt
gtgtgtaagtcagacctgggcggctctcagcgtgtccttgagaaacagtggaccacattt
ctaaaggcacggctcaactgctccgtcccgggagactcacacttctacttcaacctccta
catgccacgagcaacatcatccacatgcagggacgggacgtcatcctcggcctcttctcc
acgccgccaaacagcatccctggctctgcggtgtgtgtgtttgacatgcagcagctcgct
catgcctttgagggacgatttaaagagcagaaatccccagagtctatttggactcctgtc
tcggacgacctggtgcctaaaccgagaccagggggatgtgcagtgcagggatccagattt
agctcctctaacacgctgccagacgaggtgctcaactttgtgaagacccacccactgatg
gatgagaccgttccgctactaggacatagaccctgggtggtcaagactatgggacggtac
cagctgacggccatggtggtggacacagaagctggtccccataaaaatcgcacagttttg
ttcctgggctcaaccagaggaaccatactcaagttcctaatggttcccagtggagactct
gtgtcccacagcagtgtgtttctggaggaagtggagggattcaacccagagaagtgtggc
gaggactctcctcaggcccgtcagctcgtgtctctgtcgctggaccagaccagccacagt
ctgctgctggccttctcctcctgtctggtccgagttcccacatctcgctgccacctgcac
tctcgctgcatgaagagctgtctggcctccagggatccttactgtggctggaccagaggc
agcacctgctccttcttgagaccaggcacaaggctgccgtttcaacaagacgtggagtat
ggaaacaccacctcccatctaggagactgtgacggaattctgcagcagagtttgctgatt
gagccggagagcctggtttccctcaacctgctcgtggcgtccgcagtctctgcatttacc
atcggggcggcgctctctggccttgccgtgtgctggatcatggcccacaagcctgccaac
cgtcgccatggcaacgcttcccagtcctccatccagcgacgagagagaggcctgctcact
aacggcggcggcggaatgggaggctccgtgctgagcgtaacgcggcagggaggtggggag
cgcccctgctctcagggcggggagaccctcttcgtcatgcccaatggctgggtgaagtca
ggggagctcgaccccggtttcctccccaccccggagcacaccccccagcagaaacgcaga
ggcctgcggctgtctgactccaactctggagggtgggacaccagccagacgtacctgggg
ggaggctctgtgggcctgggctcaccctgccgcatgcccccctctgtctacctgaccacc
agactgttccagcaaggggttgttgggagacacgctggcgagggccgagtaatagacaca
ccacgccagcactatgtctgcctgagcaagcaagaaaagggaatgaaagggacgcccaag
gccccgctcaggaagtctgcaggagaatatgtttaccccatgaccccccaggactcgcct
gagcgtcggagggtggtctcggcacccagtgccgctatggagtataacgacccgctgcct
ctgcgctggccggcccaggaaggatacatcctcagtagccacggtatggtccctgtccct
atgcctcccccctccatgccggctcccagtgttcaggcatatgtgtcccagcagcacacc
cccgggctgagcagggccctgctgagaggggccctggagcgaggggagctgggcgagctg
gtggatctcagccacctgatgtgcaagaagaactgcagtgacaggactcagaccggccag
tga
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