Hippoglossus stenolepis (Pacific halibut): 118118348
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Entry
118118348 CDS
T08308
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118118348
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hsp03310
]
118118348
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118118348
Nuclear receptors [BR:
hsp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118118348
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PA_decarbox
Motif
Other DBs
NCBI-GeneID:
118118348
NCBI-ProteinID:
XP_035027399
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Position
11:11265303..11280684
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AA seq
502 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKAQECAGSGGKGSTTLSLP
RDDGVCGGSGEDGEEGLSRSYSSGGSSSTISDLDDIAALPDLFDLPLTPEEASEYCSLEL
LGGGTSTGNTSNSSSSSSSSSSSLSNQNSPQQTVLDGTDGTGIQLLHTNSHTHVLLGHTL
LDHLPDDCSITDLERITQSIVKSHLETCQYSAEDMKRFTWVQYTPEETRAFQNKSAEWMW
QQCAHHITNAIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNVNNNTIF
FNGKFAPAQFFKALGCDDLVSAVIDLGKGLCRLQLSDEEMALLSAAVLLSSDRPWLTEGQ
KIQKLQDKVYLALQHSLQKSGASDEKLDKMMSKLPIMKSICNLHIDKLEFFRLVHPETAF
SFPPLYREVFGSEMSLPDSTDS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagggctcagatagaggtcatcccctgtaagatctgtggggacaagtcctcaggaatc
cactacggagtcatcacctgcgaaggctgcaagggtttctttcggcgcagccagcagaac
aatgccatgtactcatgttcccgccagaggaactgcctgattgaccgaactaaccgtaac
cgctgccagcactgccgcctacagaagtgtctggctttgggcatgagcagagatgccgtg
aagtttggtcgcatgtcgaagaagcagcgcgacagcctctacgctgaagtgcagaagcac
cagaaggcccaggagtgtgcgggctctggaggcaaaggctccaccactctgtctttaccc
agggacgatggagtctgcggaggcagtggggaggacggtgaagagggcctgagccggtcc
tacagcagcgggggctccagctccaccatcagcgacctagacgacatcgcagcgctgcct
gacctgttcgatctgccgctgacccccgaggaggccagcgagtactgcagcctggagctg
ctcggcgggggcacaagcaccggcaacacctccaactcatcgtcctcctcttcttcctcc
tcctcatccttgtccaatcagaattccccacagcagactgtactggacgggacggacggc
actgggatacaactcctgcacacaaactctcacacgcatgtgctgctgggacacacactg
ctggaccatctgcctgatgactgctcaataacagaccttgagcgcatcactcagagtatt
gttaagtctcacttagagacgtgtcagtacagcgctgaagacatgaagagattcacctgg
gtacaatacactcctgaggaaacacgtgcttttcagaacaagtcagctgagtggatgtgg
cagcagtgtgcccaccacatcaccaacgccatccagtacgtggtggagtttgcaaaacgc
atcactggctttatggacctatgccagaacgatcagataatactgctcaaagcaggctgc
ctggaggtgctgctgatacgtatgtgccgagcgttcaacgtcaacaacaataccatcttc
ttcaacggaaagttcgctccggcccagttcttcaaagctcttggttgtgatgacctggtc
agtgcagtgatcgaccttggaaaaggactctgccgtctacagctgtctgatgaagagatg
gctctgttaagcgctgccgtccttctttcctcagatcgaccctggttgacagaaggccaa
aagattcagaaactccaggacaaagtctacctggctctgcagcacagtctacagaagagc
ggtgcttctgacgagaaactggacaagatgatgtccaagctgcccataatgaagtctatc
tgtaacctccacatcgacaaactggagtttttccgtttggttcacccagagactgccttc
agcttcccgccactgtaccgggaagtttttggcagcgagatgtctctgccggactccaca
gacagctag
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