Hippoglossus stenolepis (Pacific halibut): 118118425
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Entry
118118425 CDS
T08308
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145
Phagosome
hsp04210
Apoptosis
hsp04517
IgSF CAM signaling
hsp04530
Tight junction
hsp04540
Gap junction
hsp04814
Motor proteins
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118118425
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118118425
09143 Cell growth and death
04210 Apoptosis
118118425
09144 Cellular community - eukaryotes
04530 Tight junction
118118425
04540 Gap junction
118118425
09142 Cell motility
04814 Motor proteins
118118425
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118118425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118118425
03036 Chromosome and associated proteins [BR:
hsp03036
]
118118425
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118118425
04147 Exosome [BR:
hsp04147
]
118118425
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118118425
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
118118425
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
118118425
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118118425
Exosomal proteins of other body fluids (saliva and urine)
118118425
Exosomal proteins of colorectal cancer cells
118118425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
118118425
NCBI-ProteinID:
XP_035027528
LinkDB
All DBs
Position
11:complement(12009964..12012275)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSNKTIGGGDDSFSTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEHPSYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPVISAEKAYHEQLTVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSLGEDDEEEGDY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccgtgcacgttggtcaggccggtgtccagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggatggacagatgcccagcaacaag
accattggaggaggagatgactccttcagcaccttctttagtgagaccggagctggaaag
cacgtccccagagctgtttttgtcgacctggagcccactgtcatcgatgaagtacgcact
ggaagctaccgccagctgttccaccctgagcagctgatcactggtaaagaggatgctgcc
aacaactacgcccgtggacactacaccattggcaaagagatcattgacctggtgctggac
aggatccgcaaactggctgaccagtgcactggtcttcaaggcttcctggttttccatagc
ttcggaggtggcaccggctctggcttcacctcactgctgatggagcgtctgtccgttgac
tacggtaagaagtccaagctggagttctccatctacccagccccccaggtgtccactgct
gtggtggagccctacaatgccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagataacgaggccatctatgatatctgccgtaggaacctcgatatcgag
catccctcctacaccaacctgaacaggttgatgagtcagattgtgtcctccatcactgct
tccctccgtttcgatggtgccctcaatgttgacctgaccgagttccagaccaacttggtg
ccatatccccgtatccacttccctatggccacctatgctcctgtcatctctgctgagaag
gcctaccatgagcaattaacggtgtctgagatcacaaatgcctgcttcgagccagccaat
cagatggtgaaatgtgaccctcgccacggtaaatacatggcctgctgcctcctgtaccgt
ggagatgtggtgcccaaagatgtcaacgctgccatcggcaccatcaagaccaaacgcacc
atccagtttgtggactggtgccccactggtttcaaggtcggcatcaactaccagccgccc
actgtggttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accaccgccatcgctgaggcctgggctcgccttgaccacaagtttgatctgatgtacgcc
aagcgtgccttcgttcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggatatggcagctctggagaaagattacgaagaggtcggagctgatagtttg
ggagaggatgatgaggaggaaggggattattaa
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