Hippoglossus stenolepis (Pacific halibut): 118118431
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Entry
118118431 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118118431
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
118118431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
PMP1_2
EGF_2
Motif
Other DBs
NCBI-GeneID:
118118431
NCBI-ProteinID:
XP_035027542
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All DBs
Position
11:22239925..22312199
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AA seq
1312 aa
AA seq
DB search
MDLWTKSLAWIISQVLVLLSSRCGTTGAEDVCDSALVSNLPPSSFRSSSQLSSSHAPGFA
KLNRREGAGGWSPLTSDRYQWLEVDLGERTRITAVATQGRYGSSDWLTSYLLMFSDTGHN
WKQYRQEDSIGSFPGNSNADSVVQYKLQQPAIARFLRLIPLSWNPNGRIGLRLETYGCPY
TSDVVALDGGSGLVYRWSPGARRTSKEVVSLKFKTLRNSGTLLQASGEGGLGLSLELERG
KLQLLLRQGGTSSPEPRRLASLGSLLDDQHWHHVAVERQSAHLNLTVDKHSERVQIPAEF
SHWNMEQLSVGAALSLDSQKPLVPKRNFQGCLENLIYNSLNLIERAKHNDQQVTLMGNVT
FSCAEPVSVAVTFPGPQSFLQLPWAMASASGGVSVGFQFRTWNRAGLLLTFDLPDEGGAV
WLHLSEARLRLQIQKAGRAPLELSAGSALNDGQWHSVDFTSERGRLTVAVDEGEGGVAHA
SPSFPVSVRHQLFFGGCPADDDNQECTNPFDIFQGCMRLLSVDNQPVDLILVQQRLLGNY
SHLQIDMCGIIDRCSPSRCEHGGRCSQSWTIFHCNCSDSGYSGATCHSSVYEQSCEAYKH
NGNTSGHFYIXAAGSGPIRPQLVYCNMTEDDTWMVIQHNNTELTRVRPSPDVNQHLVHFD
YSSREEQLSAVISQSQHCEQELAYRCRKSRLLNTPEGSPFSWWLGGPGSGRHQAYWGGAQ
PGSQQCACGLQGDCVDPQHYCNCDADRLEWAEDSGLITHKESLPVRSLVLGDIQRPGSEA
AYRVGPLRCHGDKNFWNAAFFDKETSYLHFPTFHGELSADISFLFKTTASSGVFLENLGI
KDFIRIELRSSTQVVFSFDVGNGPLDVHVQSNVSLNDSRWHRVRAERNVKEATLRLDELP
AATQEAPADGHFHLQLNSQLFIGGTASRQKGFRGCIRSLQLNGVTLDLEERARITPGVRP
GCPGHCSSYGSLCQNQGRCVERATGFHCDCGLSAFTGVFCHSEVSATFESTTSVSYTFKE
PYELLRNSSALPSSIYSDMTLRGENVSLSFRTNQSPALLLYVSSYYREYLALLINKHDEL
EVRYKLDSSREADILRSRVKSLANGQLHTVTVRRLSDSVSVQINQNAREEFNLTSDGDFN
AIKSLVLGRVQDSELDPDGSRLASLGFSGCLSVLSFNSISPLKAALLHPDTSPVSISGPL
LRSSCGSPASANPYAAENKHHLSDQSGSVGSGQPLVNAIRTDSALIGGVIAVVIFVVVAV
LAITGRFLYRRKETYRNQEVKGVKREDSPDFPFNSQTDSQNVCSENRKEYFI
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtggactaaatcactcgcttggattatctctcaggtcctcgtgcttctctcc
agccggtgcgggacaacaggagcagaagacgtgtgtgacagcgcgctggtgtccaatctg
ccgccgtcctccttcaggagctcctcccagctgtccagcagccacgcacccggcttcgcc
aaactcaacaggagagaaggagccggaggttggtcccctctcacctcagacaggtaccag
tggctggaggtcgacctcggggagcggaccaggatcaccgccgtcgccacccagggccga
tacggcagctccgattggctgacgtcgtacctgctgatgttcagcgacacgggacacaac
tggaagcagtaccgacaggaggacagcatcgggtctttcccagggaacagtaacgccgac
agtgtggtccagtacaagctgcagcagccggcgatcgcccgcttcctccgcctcatccct
ctgagctggaaccccaacggacggatcgggctgcggctggagacctacgggtgtccttat
acctctgatgtggtggctctcgacggcggcagcggcctcgtgtacaggtggagtcccgga
gcgaggcgcacatccaaagaggtcgtctctctgaagtttaagaccctgaggaattctggg
acattgctgcaggcgtcgggagaaggaggacttggactcagtctggagttagagagagga
aaactgcagctgctgctcagacaaggtgggacttcctctcccgagccccggcgtcttgcc
tccctcggcagcctgttagacgaccagcactggcatcatgtggcagtggaaaggcaaagt
gctcacctcaacctcactgtggacaaacacagcgagagggttcagatccctgcagagttc
agccactggaacatggaacagctgagcgtcggagcggcgctgagcctcgactctcagaaa
ccacttgtccccaagaggaacttccagggctgcctggagaacctgatctacaacagcctg
aacctgatagaacgagcgaaacacaacgaccagcaggtgactctcatgggcaatgtgacc
ttttcttgtgctgagccagtttccgtggccgtgacgtttcccggcccccagagcttcctc
cagttgccgtgggcaatggcatcggcttcggggggcgtgtccgtggggttccagttcagg
acgtggaacagggcggggcttctgctcacctttgacctccctgacgaaggaggagcggtc
tggctgcacctgagcgaggcccgactgcggctgcagatccagaaggctggcagggcgccg
ctggagctcagtgcaggttcggctctgaacgacggccagtggcactcagtggattttacc
tccgaacgaggacgtctgaccgtcgctgtcgatgaaggagaaggaggagttgctcatgcc
agcccctcatttcctgtcagcgtaagacatcaactcttcttcggtggttgtcccgctgac
gacgacaatcaagagtgtacaaaccccttcgacattttccagggctgcatgcgcctcctc
tctgtggacaaccagccggtggacctgatcctggtgcagcaaagactgctgggaaactac
agccacttgcagatcgacatgtgcggcatcatcgacaggtgttctcccagtcgttgtgaa
catggcggccgctgcagtcagtcctggaccatcttccactgcaactgctcggacagcggc
tacagcggagcgacctgccacagctccgtgtacgagcagtcgtgcgaggcgtacaaacac
aacggcaacacgtcgggacacttctacatcnnggcggccggcagcggaccaatcagacca
cagctggtgtactgcaacatgacagaggacgacacgtggatggtgatccaacacaacaac
acagagctgaccagagtccgaccctctccagacgtgaaccagcatttagttcacttcgac
tactcgtcacgcgaggagcagctgtcggccgtcatcagccaatcacagcactgcgaacag
gagctggcctaccgctgcaggaagtcccgcctcctgaacaccccagagggctctccgttc
agctggtggctcggcggtcccggctccggtcggcaccaggcgtactgggggggagctcag
ccaggcagccagcagtgcgcctgcggcctgcagggcgactgcgtggacccccaacactac
tgcaactgtgacgccgaccgcctggagtgggctgaagactcgggcctgatcacccataag
gagagcctccccgtcaggtctctggtgctgggtgacatccagaggccggggtccgaggcg
gcctacagggtgggaccgctccgttgtcatggagacaagaacttctggaacgcggcgttt
ttcgacaaggagacgtcgtacctccacttccccaccttccacggcgagctgagcgccgac
atctccttcctgttcaaaaccacggcctcctcgggggtgttcctggaaaacctgggcatc
aaagacttcatccgcatcgagctgaggtcctccacccaggtggttttctccttcgatgtc
ggtaacgggccgctggacgtccacgtgcagtccaacgtgtcgctgaacgacagcaggtgg
caccgggtccgggccgagcggaacgtcaaggaggcgacgctgcggctggacgagctcccc
gccgccacgcaggaggctccggctgacggacacttccacctgcagctcaacagccagctg
ttcatcggaggaacagcgtccaggcagaagggcttccggggctgtatccgctccctgcag
ctgaacggcgtcaccctggacctggaggagagggcgaggatcacacccggggttcgaccc
ggctgcccgggccactgcagcagctacggctcgctctgccagaaccagggccgctgcgtg
gagagagccaccggcttccactgcgactgtggcctgtcggcgttcaccggagtcttctgc
cactcagaggtgtcggccaccttcgagtccaccacgtccgtcagctacaccttcaaggag
ccgtacgagctgctgaggaacagcagcgccctgccgtcctccatctactccgacatgacg
ctgagaggagagaacgtctcgctgagcttcaggaccaatcagagtccggctctgctgctc
tacgtgtcctcgtactacagagagtacctggccctgctcattaacaagcacgatgagctg
gaggtgaggtacaagctggacagcagcagagaagcagacattttgaggagcagagtgaag
agtttggccaacggacaattacacacagttactgtcaggaggctgagcgactctgtgtcc
gtgcagattaaccagaacgccagagaggaattcaacctgacgtctgacggagacttcaat
gccatcaagtctctggtgttgggcagagtacaagactctgagctggatccagacgggtcc
aggttggcgtctctgggtttctccggctgtctctcagtgctcagcttcaactccatcagt
cctctgaaagccgctctgctccacccggacaccagccccgtctccatcagcggacctcta
ctccggtccagctgcggctccccggcttcggccaatccctacgcagcagagaacaaacac
cacctgtcagaccagtctggttcagtgggttcaggtcaacctctggtcaatgccatcagg
accgactcggctctgatcggaggtgtgatagcggtggtgatcttcgtggtcgtggccgtc
ctggcgataacgggcagattcctctaccgcaggaaagagacgtatcggaatcaggaggtg
aagggagtcaaacgggaggacagccccgattttcccttcaacagccagacggactcccag
aacgtctgcagtgaaaaccgaaaggagtatttcatttag
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