Hippoglossus stenolepis (Pacific halibut): 118118435
Help
Entry
118118435 CDS
T08308
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4 isoform X1
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04020
Calcium signaling pathway
hsp04148
Efferocytosis
hsp04218
Cellular senescence
hsp04310
Wnt signaling pathway
hsp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118118435 (nfatc4)
04020 Calcium signaling pathway
118118435 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118118435 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
118118435 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118118435 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118118435 (nfatc4)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
118118435 (nfatc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
118118435
NCBI-ProteinID:
XP_035027548
LinkDB
All DBs
Position
11:20946490..20959288
Genome browser
AA seq
905 aa
AA seq
DB search
MGAAPGSGWEEGEFEFKLVFEEDPPPRQSQGPAPVRAAEPESSGPGEEGESSLLRLEPGN
SSSSLVTDNHLAATHAAHSISIPSSPPSASQRAGMHSPPPRRAAVREFSGTYESLPARSV
QVSESRVVECPSIQITTISPEDDPAPTISSYWDMGGGGGGWDRERLYLPLLDPFSYRDRC
PGSLSPSPASSPSSRGWLSPASSCDSLLVEEEELNEATINFGLSPSSRPTSPGGKKRRNS
PLASPCTSRRGSYSEELQGFNLEGGDSHLNSQAPPSSCELSIPQKTRKTSLEQLSPREVD
QEQAPGHSSHCPLPETQQPRREPPPLGMDYLSVPPALAWGRTRASTHSPLFRSNALPPLD
WPLPSQFDQYELRIEVQPRPHHRAHYETEGSRGAVKATPTGHPVVKLCGYTERKPLSLQV
FVGTADDRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCAGI
LKLRNSDIELRKGETDVGRKNTRVRLVFRTHLHLAPPVAAPGRVLALQAASLPIECSQRS
AQELPVIESVSITSCSVEGGEELLLSGSNFLPISRVLFMERGTDGKLQWEEEAHVDRDNS
NECLLCVRVPAYSDLSVSRPVSLSLYVSNGKRKRSSTHCFKYLPIMFKEEDPLLSRPSAL
PLDRVCPEGQLRMDRGFHVRGDPVAEDRGLGFNLPPYPSAYSPPCPTMSYHEEYCSTPDA
AGEEPPGSRGALSERHPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSPSP
SHSSSLSPFPASSPISTSPLPPMPTSPYPQYSAYSQEVCPSPPSNPSPYQDMFPAPYSHY
DGWDPQGRVMGMGHGGERDAKIHDCPLEFSSSVSMHHITFEEVSEFIGEDIQSYQSASHM
DNQPN
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctctggctgggaggagggcgagttcgagttcaagttggtgttc
gaggaggatccgccgccgcggcagagccaggggccggcgccggtgcgcgcagccgagccg
gagagctccggtcccggggaggagggtgagagctccctgctgcgcctggagcccggtaac
agcagcagcagcctggttacagacaaccacttggctgccactcacgccgcgcactccatc
agcatccccagctcgcccccctcagccagtcagcgggccgggatgcactcgccacctcca
cgccgggccgcggtcagagagttcagcgggacctacgagagcctgcccgctcgctcagtg
caggtgtcagagtctcgtgtggtcgagtgtccgagcatccagataaccaccatctcccca
gaagacgacccagcaccaaccatttccagctactgggacatgggcggcggaggaggtggg
tgggaccgagagcgcctctacctccccctgctggaccccttcagctaccgtgacagatgc
cccggctccctcagccccagccctgcctccagcccctcctcccgcggctggctcagcccc
gcctccagctgcgactccctgctggtggaggaggaggagctcaacgaggccaccatcaat
tttgggctctcgccgtcatcgaggccaacttcccccgggggcaaaaagcgccgaaactcc
cctctggcctccccctgtacctcgcggaggggcagttactcagaggaactgcaggggttc
aacctggagggcggagactcccacctcaattcacaagctccgcccagcagctgcgagctc
agcatcccacagaaaaccaggaagacgtcgttggaacagttgtctcccagggaggtggat
caggagcaggctccaggccacagctcgcactgcccactgcccgagacccagcagcccagg
agagagccccctcctctgggcatggactacctctctgtgccccctgctctggcctggggc
cggacccgagccagcacccacagccccctgttcaggtctaacgcgttgcctccgctcgac
tggccgctgccgtcccagtttgaccagtacgagctgcgtatcgaggtgcagccgcgtcct
caccacagagcccactacgagacggagggcagccgaggagccgtcaaggccacgccgacg
ggacatcctgtcgtcaagctgtgtggatacactgagaggaaaccgctctctcttcaggtt
ttcgtcggaacagcggacgacagatccatcaggccgcatcctttctatcagatacacagg
gtcacagggaagatggtcggcactgccagtcatgagagcgttcaggccgggaccaaactg
ctggacatccccctgaaccctgagaacaacatgaccgcactcatcgactgtgcagggatc
ctgaagctgaggaactcggacatcgagctgagaaaaggggaaacggacgtcggcaggaag
aacacgcgtgttcgtttggtgtttcgcacccacctccatctagcgccccctgtagccgcg
cctggacgggtcctggctctgcaggcggcctcgctgcccatcgaatgctcccagcgctcg
gcccaggagctgccggtcatcgagtccgtcagtatcacttcctgctccgtggagggcgga
gaggaacttctgctgagtggcagcaacttcctgccgatctccagggtccttttcatggag
agagggacagatggtaaattacagtgggaggaggaggctcatgtcgaccgtgacaacagc
aacgagtgtttgctgtgcgtgagagttcccgcctacagcgacctgtccgtcagtcggccc
gtgtccctcagtctgtacgtctccaacgggaagaggaaaagaagcagcactcactgcttc
aagtatctccccatcatgtttaaagaggaggaccccctgctgtcccggccgtctgcgctg
cctctcgacagggtgtgtccggagggtcagctccggatggaccggggcttccatgtgagg
ggcgaccccgtggctgaggatcgaggcctgggcttcaacctgcccccctacccctccgcc
tactctcctccctgccccaccatgagctaccacgaggagtactgctctacgcccgacgct
gcgggggaggagccccccgggtccaggggcgccctctccgagcgccaccccagcttcgag
aacctggagctgggcttcaccgagctccttcctcctctgtacccccgcggcccgcagcct
ccctccccttctccctctccgtggctggactcaccctacctgtcctcctcaccctctccc
tcccactcctcctctctcagcccgttcccagccagcagtcctatctctacctcccctctg
cctcccatgcccacctccccttacccccagtactctgcttattctcaggaggtgtgtccc
tcccctccctccaaccccagtccctatcaggacatgttcccagcgccctactcccattat
gacggctgggacccccagggaagggtgatggggatgggacatgggggagagagggatgcc
aagatccacgactgccccctggagtttagcagctcggtgtcgatgcaccacattaccttt
gaagaggtatcagagttcatcggagaggacatccagtcgtaccagtcggcctcacacatg
gacaaccagccgaactga
DBGET
integrated database retrieval system
