Hippoglossus stenolepis (Pacific halibut): 118118613
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Entry
118118613 CDS
T08308
Symbol
exo1
Name
(RefSeq) exonuclease 1 isoform X1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118118613 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsp03032
]
118118613 (exo1)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118118613 (exo1)
DNA replication proteins [BR:
hsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
118118613 (exo1)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
118118613 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
TPR_2
Motif
Other DBs
NCBI-GeneID:
118118613
NCBI-ProteinID:
XP_035027644
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Position
12:1940600..1952609
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AA seq
797 aa
AA seq
DB search
MGISGLLQFIKDASEPISVKKYRGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVWYCM
KFVDMLLTFGVKPVLVFDGRNLPSKQGVDKARRERRQANLQKGRQLLREGKLSEARDCFT
RCVNITPAMAHNLIKVARARGVDCVVAPYEADAQLAYLTKSGFAQAVITEDSDLLAFGCK
KVILKMDKQGNGLEIDQSNLGRCRSLGNVFTEEKFRYMCILSGCDYLASLHGIGLGKACK
LLRLAQDPDILKVIRKMGQYLKSNLVVPEDYIEGFIRANNTFLHQLVFDPIRRKVVPLNP
YPEHIDPDTLSYAGTNVGDEKGLQMALGNVDIHTMARIDDFNPDKPTSQKPKRHSRHWKE
SPAPTGPSIWSVGFKPTSAAPPCSAESPDRTSSTRGKERVIGLQGLRLPCRELQVKRPRE
DSGVSDQDVLQQYSSSSQKRSKTDQQPDKPKLTSQSRPRNRFATLLQRRNQEAEEDGQAT
CSRFFSSSSSTVSLSTRESAQEDLPHGVEPTAVTPTEDKSSPSDQTNDSDGPDVPSVETP
SPPPSPGTTPPSPASQGLRLFNWSGSSSSMEKSKSPKSTSGLAALQQFQFKRESFSSSPK
THNPCKDTSSLCPSSTDGNSEDNPPDSPPSQDSAYFSQSQPYHTPCHKEEVPTHSLPSFD
QNDATSEMNLHRDSEVEQSPTYSNKKSGILGSKISGLSKLKSINHSQAAKVPTLGPARAS
GLRKKSVGSGKKVSSANNENSPGVQATISSLWKNFSFKKDTQKLTSCMEGKPKPMSPVKD
NMLTSSSHTDIGLITSF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctctggtctactacagttcatcaaagatgcatctgagcccatcagtgtgaaa
aaatacagaggccagacagtggctgtggacacgtactgctggctgcacaaaggagcgttt
tcatgtgctgagaagctggctaaaggagaacccactgaccaatatgtatggtactgcatg
aaatttgtggacatgttgttgacctttggtgtcaaaccagtgctggtgtttgatggacgc
aatctgccttccaaacaaggagtggacaaggctcgcagagagcgcagacaagctaacctt
caaaagggcagacagctcctccgtgaaggtaaattgtccgaggccagggactgttttacc
cgctgcgttaacatcacaccagccatggctcataatcttattaaggttgcaagggcaaga
ggggtggactgtgtggtggctccatatgaagctgatgctcagttagcttacctcactaaa
tccggttttgcccaggctgtcatcactgaagactctgacctgctggcattcggctgtaaa
aaggtgattctaaaaatggacaagcagggcaacggtctggagatagaccaaagtaacctg
ggccgatgtcgcagcttggggaacgttttcacagaggagaagtttcggtacatgtgcatc
ctctctggctgcgactatctggcctccctgcatggcattggcctgggcaaagcctgcaag
ctgctacggctggcccaagacccagatatcctaaaggtgatcagaaagatgggccagtac
ctgaaatctaatctagtggttcctgaggattacatcgaggggttcatcagagccaacaac
accttccttcaccagctcgtcttcgatcccatcaggaggaaggttgtacctctcaaccca
taccctgagcatattgacccagacacgctcagctacgctggaacaaacgtaggagatgag
aaaggcttgcaaatggccttaggaaacgtggacatccacacaatggcgaggatagatgac
ttcaacccagacaaacccacttcacagaagcctaaacgccatagtcggcactggaaggaa
tcaccagctcccactgggcctagtatctggagtgtaggcttcaagccaacctctgctgcc
ccgccctgttctgctgagtctccagacaggacttcctccaccagggggaaggagagagtc
atcggcttacaaggtctgaggctgccctgcagagagctgcaggtgaagagaccaagagaa
gactctggagtatccgaccaggacgtgctgcagcagtactcctcctccagtcagaaacga
tccaagacagaccaacagcctgacaagcccaaattaacaagtcagtcaagaccacgcaac
cgcttcgccacgctgctgcagaggaggaaccaggaagctgaggaggatggccaggccaca
tgcagcagattcttcagcagttccagctccacagtcagtctcagcaccagggagtctgct
caggaggatttacctcatggtgtggagcccacagctgtaactcccactgaggacaagtcc
tctcccagcgaccagaccaatgacagcgatggtcccgatgttccatctgtggagaccccg
agcccacctccatcaccaggcactacaccccccagtccagccagtcaaggcctcaggctg
tttaactggtcgggcagctcctcttccatggaaaaatcaaaaagccctaagtccacctcg
ggcctggctgcccttcagcaatttcagtttaagagggagagtttttcctcctctccaaag
acccacaatccctgtaaagacacgtcatccttgtgtccgtcctccactgacggaaactca
gaggacaaccccccagactcccctccgtcccaggacagtgcctacttctcccagtctcag
ccttaccacacaccctgccataaagaggaagtccccacccacagcctcccctcctttgac
cagaatgatgccacatctgaaatgaatctgcacagagattcagaggtcgagcagagtcca
acatactcaaataagaaatctggcattctggggtcaaagatttcaggtctgtcaaaactg
aagtccatcaaccacagtcaagcagcgaaagtgccaacgttgggcccagccagggccagt
gggctgaggaagaagtctgtgggatctgggaagaaagtctcctccgccaataatgagaac
agccctggagtccaggccaccatcagcagcctgtggaagaacttcagcttcaaaaaagat
acccagaagctgacttcctgtatggagggaaagccaaagcccatgtctccggtcaaagac
aacatgctgaccagctcgtctcacacagacatcggcttaatcaccagcttctga
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