Hippoglossus stenolepis (Pacific halibut): 118118710
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Entry
118118710 CDS
T08308
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118118710 (arid5b)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
ARID
118118710 (arid5b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
118118710
NCBI-ProteinID:
XP_035027843
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All DBs
Position
12:18982288..19061222
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AA seq
1182 aa
AA seq
DB search
MEPNSLKWVGSSCGLHGPYIFYKAFKFNRDGKPRILSLGDFFFVRCKPEDPICIAELQLL
WEERTSKQLLSSSKLYFLPEDTPQGRTVAHGEHEVIAVCEKVIVRLEDLVKWTVPDFSGW
AHGLKAEPLKASVLRELGTNGRREALHRYRESTLTSGLNFKDVQRERAQLGQEEDGRKVL
VLSYPQYCRYRSVLARLSQQPSSLLIDHTVLALGGIAALGGSTRILYCRDTFEHPALLQN
ESICDEFAPNLKGRPRKKKLSISQRRDSQGQAQGQGSSGSTQGSAAVAAQDPCSPESKIT
TKVKHNCKTVPNGKLTPAAKYKANGLSKRSSAEEKEREKEKEKEERSEREENKEEETSEE
SRAEEQTFLVSLYKYMKDRDTPIERIPFLGFKQINLWTMFQAAQKLGGYELITVRRQWKH
VYDELGGNPSSTSAATCTRRHYERLLLPYEREINGEQDKPLPLAKPRKQEVSQEKASGPK
AKAVGAKKLKGSSNPKLGSRKDRGETVNSQEQSQDSDEKEEDQELSAAVKQESSLRDEPI
LIEEEELHVTLKKEESLAVEQPSSLCPKEPDCRAPHPSLPLHLGPGPHPEWRQITEALQA
KLTCEQQTEGHFIPKTPYLPHCWDQNKSAGHVALPESSSRVKDSIESHGGRVGKVLPMCK
QADRQCIDLSTDSFPEKEDYGVNKKESSQSPAQTAAYCKASQGVMSPLAKKKLLSQVCES
NPFSFTSPSLQPPTVASSLPVIPVADRDKEKRKVEEEVVGQRHGCVSDAISEVAPIFRPS
VIQHAQSSKPQQQAASDRSAVGELSETFSCRTSHHLQPQVTPPWQPYLPRTHAQDSVESG
EKLLQSPAAQARSYVGDCYSSPHLHSLYRQTENCLSQERMVSFANGERREHYTREREGGQ
GFVCGALEQEGLAYRSHYSDRTQTHGDSREADDEPRDFTISKPLSQRLSSFSKPSFCSLP
YPIMHQGLDSHPKACRVPPMTISSPKQSSAESSQPFPSPKSSSDSPLTISIRPSKRSLAE
PDNEEVPERKVRVVTPIHPACSIRRSDPEELKPAEPAHAVHLNNHLPEGHLATAFPPGLA
AHIYGGLYPHGSLVSQGTQDGLQHHPGLQYLKSQSAVSPLMPSLAFHPMMLHRQLLASSP
SPHHFYRHPGGAALYGDLLHHLYPLSTLAPPQLSSVHPSTRL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaactcactgaagtgggtgggctcgtcttgcggtttacatggaccatatata
ttctataaagcctttaaatttaaccgggacggcaaaccgaggattctgtctctcggagac
ttcttcttcgtcagatgtaaaccggaggatcctatttgcatagcggagcttcagctgctc
tgggaggaaagaacaagcaagcaacttttatcaagctccaaactttattttctacccgag
gatactccccagggacggacagtcgctcacggagagcacgaggtaattgcagtgtgtgag
aaggtgattgttcggctggaggacctggtgaagtggacggtaccggacttctcaggatgg
gcccacggtctgaaggccgagcctctcaaggcctccgtgctccgggagctggggaccaac
gggaggcgggaggccctgcaccgctaccgggagagcaccttgaccagcggcctcaacttc
aaggatgtccagagggagagggcacagctaggccaggaggaggacggacggaaggtgttg
gtcctcagctatccccagtattgccgctaccgctcggtattggcgcggctcagccagcag
ccgtcctctctgctcatcgaccacacggtgctggcgctgggcggcatcgctgcgttgggc
gggagcacgaggatcctgtactgccgggacacctttgagcaccccgccctgctgcagaac
gagagcatctgtgacgagtttgctcccaacctcaaagggcgacctcggaagaagaaactg
tccatttctcagaggagggactcccagggtcaggctcagggtcaagggtcgtcagggtca
acccagggatcagcggcagtggcagcacaggacccctgcagccctgagagcaaaattaca
accaaggtcaaacacaactgcaaaacggtacccaacggaaaactaacaccagcagccaaa
tacaaggccaacggcctcagcaagaggtcctccgcagaggagaaggagagggagaaggag
aaagaaaaggaggagagaagcgagagggaggagaacaaagaggaggaaacatcagaggag
agtcgagcggaggagcagactttcttagtatcactgtacaagtacatgaaagacagagac
acgcccatagagaggattcccttcctcggcttcaaacagatcaacctttggaccatgttt
caagctgctcagaaacttggaggatatgagttgatcacggtgcgcagacagtggaagcat
gtatatgatgaattgggcgggaaccccagcagcacaagtgcagccacgtgtacacggaga
cactacgagaggctcctcctcccttacgagagggagattaacggcgagcaggacaagccc
ctccccttggccaagcccaggaagcaggaggtcagccaagagaaggcctcgggacccaaa
gccaaagcagtgggggccaagaaattgaaaggctccagcaatcccaagctggggagtaga
aaggacagaggggagacggtgaacagccaagaacaatcacaggactcggatgagaaagag
gaggatcaggaactgtccgcagccgtaaaacaggagtcatctctgagagatgagccgatt
ctaatcgaggaggaggagttacatgtcactctgaagaaagaggagtctctggcagtggag
cagccatcatcactttgccccaaagagccagactgcagagcaccgcaccctagccttccc
ctccacttggggcctggtccccatcctgaatggaggcaaatcactgaggccctgcaagca
aaactgacctgtgaacagcaaactgaagggcatttcattcctaaaaccccgtacctgcct
cactgctgggatcagaacaaatcagctggacacgttgctctgcccgagtcctcctccagg
gtcaaagactctatagagagtcacggtgggagagtggggaaggtgttgcccatgtgtaag
caggcggacagacagtgtatagacttgagcacagactccttcccagagaaagaagactat
ggggtcaataagaaggagtcttcccaaagccctgcacagacggctgcctactgcaaagcc
agtcagggggtcatgtcgcctttggctaaaaagaagctcctttcccaagtgtgcgagtcc
aaccccttctcctttacgtctccttctcttcagcctccaacagttgcgtcctcgctccct
gtcataccagtggcagaccgggacaaggagaagaggaaggttgaggaggaggtggtagga
cagcggcacgggtgcgtgtcagacgccatatcggaggtagcgcccatattcaggccatcg
gtcattcagcacgcccagagcagcaagccccaacaacaagccgcgtcagacaggagcgct
gtcggggagctttcagagacattcagctgtcggacgagccatcaccttcagcctcaagtc
actccgccgtggcagccctatctcccccgaacccatgcccaggacagcgtggagtccggg
gagaagctactccaaagcccagccgctcaggcacggagctacgtaggcgactgctactcc
tcccctcacctccacagtctgtacaggcagactgagaactgtctgagccaggagaggatg
gtcagctttgccaacggagagcggagagagcactacaccagggagcgggaaggaggccag
ggcttcgtctgtggcgccctggagcaagagggcctggcctacaggtctcactacagtgac
aggacacaaacacatggggatagtagagaggctgacgatgagcccagagacttcacaatt
tctaaacctctctctcagaggttgtcctccttctccaagccctccttctgcagcctaccg
tatcctatcatgcaccaggggttggactcccaccctaaggcctgcagggttccccctatg
acaatctcttctcccaaacagagctcagcagagtcgtcgcagccattccccagccccaaa
tcctcgagcgattcgcccctcaccatctccattcgacccagcaagcggagcctagcggag
cccgataacgaggaagtcccagagaggaaagtccgagtggtgacgccaatccaccccgcc
tgctcaatccgacgcagtgacccagaggagctgaaaccagctgagccagcccacgctgtt
cacctcaacaaccatctccccgagggccacctggcgaccgccttccccccaggccttgcc
gcacacatctacggcggcctgtacccgcacggcagcctggtgtcacagggaacgcaggac
gggctccagcatcacccgggcctgcagtacctgaagagccagtcggccgtctctcccctc
atgccctcgttagccttccaccccatgatgctccacaggcagctgttggcctccagcccc
agcccgcaccacttctaccggcacccgggtggtgcagcactgtacggggacctgttgcac
cacctgtaccccctctccaccctagcaccacctcagctgtcctcggtacaccccagcacc
agactgtga
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