Hippoglossus stenolepis (Pacific halibut): 118118727
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Entry
118118727 CDS
T08308
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03460
Fanconi anemia pathway
hsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118118727 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
118118727 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118118727 (fancl)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118118727 (fancl)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118118727 (fancl)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118118727 (fancl)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
118118727 (fancl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_d2
FANCL_d1
FANCL_C
zf-RING_2
SLX1_C
RING_Ste5
DUF2286
zf-HC5HC2H
VP_N-CPKC
PHD_NSD
zf-rbx1
RINGv
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
118118727
NCBI-ProteinID:
XP_035027874
LinkDB
All DBs
Position
12:complement(2957677..2984746)
Genome browser
AA seq
385 aa
AA seq
DB search
MESLVKDNPILLPLNSDRTIYDGFITVQERDFRLRIVLPPDHELKRAKLHCSWQLKHLLH
GYEPIVKQRLQQSADLVSFLLELKTVLEVGLKSRPECSSIPPPQYYSQLISEMETLGWNK
LLFIDTEFRTLRLKAQDSSGRQHILTIKLKSKHPAEGPECSADLPLPLAITWTPQTTLEQ
LHNQFLLVLESLTEFWDVLDEIDDNTWILEPEKPSRSDTMRRIAIGNNVSIKVEVDPRHP
KMLPECCLLGAEHVEMPAQTMVTPLRNKLNSNMHLWNPDSSVLRNLRDVLEIEFPSPATH
EKSDFSTECGICYSYRLEAAIPDQVCNDPRCGQPFHQACLYEWLRALPSSRQSFSTVFGE
CPYCSKVRVRNKGLHSTLSIHIQHT
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagtcactggtgaaagacaacccgatacttctgcccctcaactctgacagaactatc
tatgacggattcatcaccgtccaggaacgagacttcagactgagaatagtgctgccacca
gatcacgagctcaaacgggccaagttgcactgcagctggcagttaaaacacctgttgcat
ggatatgagcccatagtgaagcagaggctgcagcagtcggccgatcttgtctctttctta
ctggagctgaagactgtcttggaagtgggtctgaagagccgacctgagtgcagctccatc
ccacctcctcagtattactcgcagctcatctctgagatggagacccttgggtggaacaag
ctgcttttcatagacacagagttccgaacactgagactgaaggcgcaagactcttctggg
aggcagcacattctcactatcaaactcaagtcgaagcaccctgcagagggccctgaatgc
tcagctgacctgcccctccctctggccataacatggacaccacagactactctggagcag
ctccacaaccagttcctgctggttttggagtccctgacagagttctgggacgtcttggac
gagatcgacgacaacacctggattctggagccggaaaaacccagcaggtccgacaccatg
aggcggatcgccattggaaacaatgtctccattaaagtggaggtagatcccagacacccc
aagatgctgccagagtgctgcctgctgggagctgaacacgtggaaatgcctgctcaaaca
atggtgactcctctgaggaataaactgaactccaacatgcacctatggaacccggactcc
agcgtcttgcgcaacctccgggatgttttggagattgaattcccgtcacctgccacccac
gaaaagtctgatttcagcactgagtgtgggatttgttattcctatcgtcttgaagctgcg
atccctgatcaggtgtgtaacgaccctcgctgtggccaacccttccaccaggcctgtttg
tatgagtggctgcgagcgctgccctccagcaggcagagcttcagcaccgtttttggagag
tgtccttactgcagcaaggtacgtgtgcgtaataaaggccttcactccacactctcaata
catattcagcatacttaa
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