Hippoglossus stenolepis (Pacific halibut): 118118782
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Entry
118118782 CDS
T08308
Symbol
snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118118782 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118118782 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118118782 (snx5)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Macropinocytosis
Sorting nexins
118118782 (snx5)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
118118782 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
LcrG
Motif
Other DBs
NCBI-GeneID:
118118782
NCBI-ProteinID:
XP_035027993
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All DBs
Position
12:9603989..9611065
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AA seq
399 aa
AA seq
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MTSSLDENSKEKMRSVSVDLNHDASLLIDIPDALCERDKVKFTVHTKTTLSAFQKPEFSV
PRQHEDFIWLHDTLVETEDYAGLIIPPAPPKPDFESPREKMHKLGEGEATMTKEEYAKMK
QELEAEYLAVFKKTVQVHEIFLQRLSSHPILNKDRNFQIFLEYDQDLTVRRKNAKEMFGG
FFKNMVKSADEVLISGVKEVDDFFEQEKTFLLDYYSKIKDSTAKAEKMTRAHKNIADDYI
HISATLNSLSADDSTANKKHLEKLSDLFEKLRKVEGRVASDQELKLTELLRYYMRDIQAA
KDLLYRRARALADYENSNKALDKARLKSKDIPQAEEHQQQCLQKFDKLSNSGKKELTGFK
GRRVVAFRKNLIEMAELEIKHAKNNVTLLQGCIDLLKSN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctctttagacgaaaacagcaaggaaaagatgcgctctgtttctgtggatctg
aaccacgatgcttctctcctcattgacattcctgacgcactctgtgaacgggacaaagtc
aagtttactgtccatacaaagaccacccttagcgctttccagaagccagagttctctgtc
cccaggcagcatgaagacttcatctggctacatgacactctggtggagaccgaggactac
gctggcctgataattcctccagcgcccccaaagcctgactttgagagcccaagagagaag
atgcacaaactgggggaaggtgaagccactatgaccaaagaagagtacgctaaaatgaag
caggagctggaggctgaatacctggctgtgttcaagaagactgtccaagtgcacgaaatc
ttcctgcagcgattgtcctctcaccccattttaaacaaagacagaaacttccagattttc
ttagagtatgaccaggatctgactgtgagaaggaagaatgccaaggaaatgtttggagga
ttctttaaaaacatggtgaagtcagctgatgaggtccttatctcaggagtgaaggaagtc
gatgatttttttgagcaggagaagacattccttctcgactactacagcaagataaaagat
tccactgccaaagcagagaaaatgacccgtgcacacaaaaatattgcggatgattatatt
cacatctctgccactctgaacagtctctcagctgatgatagtacagcaaataagaaacac
ctggagaaattgtcagatctgtttgagaaactcagaaaagtggagggaagagtcgcatct
gaccaggagctgaaactgactgaactgctaagatactacatgagagacattcaggctgcg
aaggaccttttatacaggcgagcccgggcgttagctgactacgagaactctaacaaggct
ttagataaagctcgactgaaaagcaaggacattccccaggcagaggagcaccagcagcag
tgcctgcagaaatttgacaagctttcaaattctggaaagaaagagctcactggtttcaag
gggaggcgtgttgtggccttcaggaagaacctcatagagatggctgagctcgaaataaaa
catgccaagaacaatgtgactctattgcagggatgcattgacctgctcaagagcaactga
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