Hippoglossus stenolepis (Pacific halibut): 118118789
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Entry
118118789 CDS
T08308
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03008
Ribosome biogenesis in eukaryotes
hsp03013
Nucleocytoplasmic transport
hsp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118118789 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
118118789 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118118789 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118118789 (xpo1b)
03009 Ribosome biogenesis [BR:
hsp03009
]
118118789 (xpo1b)
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118118789 (xpo1b)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118118789 (xpo1b)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118118789 (xpo1b)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
118118789 (xpo1b)
Pre-60S particles
118118789 (xpo1b)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118118789 (xpo1b)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118118789 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
118118789
NCBI-ProteinID:
XP_035028011
LinkDB
All DBs
Position
12:4050474..4078794
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAVMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKNFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITT
GLNPANPTNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagttatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaactggatatcaacctgctggataatgtggtgaactgtctataccatggggtggga
ccacagcaaagaatggcacaggaagtgttgacacacttaaaagagcacccggatgcctgg
acgagagtggacaccatccttgagttctcccagaacatgaacactaagtactatgctctt
cagattttggaaacggttatcaaaacaagatggaagattcttcccaggaatcagtgtgaa
ggtataaaaaagtatgttgttggtctcataatcaagacatcatcagatgcatcaaatgtg
gagaaagaaaaggtgtacattgggaagctgaacatgatccttgttcagatcctgaagcag
gagtggcccaaacactggcccaccttcatcagtgacattgtgggggccagtcgtacgagt
gagagcctttgtcagaacaacatggtgattctgaagctgctcagcgaggaggtctttgac
ttctccagtggtcagatgacccaggtcaaggccaagcacctaaaagacagcatgtgcaat
gaattctcccagatattccagctttgccagtttgttatggaaaattcccagaatgccccc
ttggtccacgccactctggaaaccctcctacgttttctcaactggattcctctgggctac
atcttcgaaaccaaactgatcagcacattggtgtataagttcttgaacgtgcccatgttc
cgcaatgtgacactgaagtgcctgacagagatcgccggtgtcagtgtcagtcagtatgaa
gagcagttcgtcacactcttcacactgaccatgtgtcaactcaaacagatgctgcctctg
aacaccaacattcgactggcctacgccaacgggaaggatgacgagcagaacttcatccag
aacctcagtctgttcctatgcacattcctcaaggagcacgggcaactcattgagaagcgg
ctcaacctcagagaaacattaatggaagccctccactacatgctgctggtgtcagaggtg
gaagagactgagatctttaagatttgtctggagtattggaaccacttggctgcggagctc
tacagagaaagtcccttctctacatccacgtcccctctgctctctggcaaccagcacttt
gacgtgccaccacgcagacagctctatctgcctgtcctctccaaggtgcgtctgctgatg
gtgagtcggatggccaagccagaggaggtactggtggtggagaatgaccagggggaggtg
gtcagagagttcatgaaggacacagactccatcaacctctacaagaacatgagagaaaca
cttgtgtacctcactcacttggactacgcagacacagaacgcatcatgacggagaagctt
cacaaccaggtgaacggcactgaatggtcctggaagaacctcaacacattgtgctgggcc
attggatcaatcagcggggcaatgcatgaagaggacgagaagaggttcctggtcacagtt
atcaaggatctgctgggtctgtgtgagcagaagagaggaaaggacaacaaggcaatcata
gcctccaacatcatgtatatcgttggccagtatccacgctttctcagagcccactggaag
ttcctcaaaactgtggtcaacaagctgtttgagttcatgcatgagacccatgatggagtt
caggatatggcctgtgacacattcatcaagattgcccagaagtgccggcgccactttatc
caggtgcaggtgggagaggtgatgcccttcatcgatgagatcctcaacaacatcaacacc
ataatctgtgacctccaaccacaacaggtgcacacgttttacgaggcggtaggttatatg
atcggagcccaaacagaccaggctgttcaggagcaccttatagagaaatacatgctgcta
cctaatcaagtgtgggacagcattatccaacaagccactaagaacgtggacatcttgaag
gacccagagactgtgaaacagctgggcagcatcctgaagaccaacgtcagagcatgtaag
gctgtgggacacccctttgtcatccagctgggacggatttacctcgacatgctcaatgtc
tacaagtgcctcagtgagaacatatctgctgccattcagaccaatggtgagatggtgaca
aaacagcccttgatccggagtatgaggacagtgaaacgagagactctgaaactgatctca
ggctgggtcagccgatcaaacgacccacagatggtcggggaaaactttgttccaccactg
cttgacgccgtcctcatcgactaccagcgaaatgtccccgccgcccgagaacctgaagtc
ctcagcaccatggcaaccattgtgaacaagctggggggacacatcaccggcgagatcccc
cagatctttgatgccgtctttgagtgcaccctaaacatgatcaacaagaacttcgaggag
tatccagagcacaggacccacttcttctacctgctccaagctgtcaactctcactgcttc
cctgcattcctcgccatccccccggcccagttcaaactggtgctggactccatcatctgg
gccttcaaacacaccatgaggaacgtggcggacaccggtctgcagattctctacacgttg
ctgcagaacgtagcccaggaggaagcagccgctcagagtttctaccagacgtacttctgt
gacatcctgcaacacatcttctctgtggtcacggacacgtcgcacactgccggcctgacc
atgcacgcgtccatcctggcctacatgttcaacctggtggaggaggggaagatcacaacg
gggctgaaccctgccaaccccaccaacaaccaggttttcatccaagagtacgtggccaac
ctgctcaagaccgctttccctcatctacaagatgctcaggtgaaggtgtttgtgaccggg
ctgttcagcttaaaccaggacattcctgccttcaaggagcacctcagggacttcttagtc
cagataaaggagtttgcgggcgaggacacctcagacctgtttctggaggagagggaggcg
tcgctgcgtcaggctcaggaggagaaacacaagatccagatgtcggtgccgggcatcctc
aaccctcacgagatcccagaggagatgtgtgactga
DBGET
integrated database retrieval system
