Hippoglossus stenolepis (Pacific halibut): 118118870
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Entry
118118870 CDS
T08308
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118118870 (six2a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
118118870 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
HTH_NDX
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
118118870
NCBI-ProteinID:
XP_035028226
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Position
12:complement(19455686..19459611)
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AA seq
290 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNGNSHNPLTSSMNGNKTLLGSSDDDKTPSGTPDHTSHSPGLLLSSNT
GLQSLHGLAPPPGPSAIPVPSGVDSVHHHHSMHHDTILNSMSSNLVDLGS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgctcccgacgtttgggtttacgcaggagcaagtggcgtgtgtgtgcgaagtc
ctccagcaaggggggaacatcgagcggctgggacgcttcctctggtccctcccggcgtgc
gagcacctccacaaaaatgagagcgtgcttaaggcgaaagccgtggtcgccttccaccgg
gggaacttccgagagctgtacaagatcttggagagccaccagttttcgcctcacaaccac
ccgaagctgcagcagctgtggctcaaggcgcactacatcgaggcggagaagctgagaggc
cgcccgctcggcgccgtggggaagtaccgcgtccggagaaagttcccgctgccccgctcc
atctgggacggagaggagacgagctactgcttcaaggagaagagccggagcgtcctgcgg
gagtggtacacccacaacccgtatccgtctccgcgggagaagagggagctggccgagggc
acgggactcaccacgacgcaggtcagcaactggttcaaaaaccgacgacagagggaccga
gcggcggaggcgaaggaaagagaaaacaacgagaactccaacggcaatagtcacaaccca
ttgacttcctccatgaatggaaataagactctattggggagctcggacgacgataaaaca
ccatcggggacgccggaccacacgtctcacagcccgggcctgctcctcagctcgaacacc
ggtttacagtccttgcacggcctcgcgccgccgccgggacccagcgccatcccggtaccg
agcggcgtggactcggtgcaccatcaccactccatgcaccacgacaccatactgaactct
atgtcttctaatctagtggaccttggctcttaa
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