Hippoglossus stenolepis (Pacific halibut): 118118874
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Entry
118118874 CDS
T08308
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118118874 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118118874 (papolg)
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
118118874 (papolg)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
118118874 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
118118874
NCBI-ProteinID:
XP_035028231
LinkDB
All DBs
Position
12:complement(4126771..4144563)
Genome browser
AA seq
827 aa
AA seq
DB search
MKEVSSTMPGGQQQQPQKHYGITSAISLAPPRDIDHQYTKKLCDAMKPFGVFEDEEELNH
RLAVLGKLNNFVKEWISEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVERSDFFQSFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPD
NLDLRGDSILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNM
LGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSITDEILQGKAEWPK
LFEPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQS
FPGSKENRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDG
MKIEATHVKKKQLHQYLPPEVVQKKKRSIAELNRSSNGGSSKRISLDSSHLDSSRDTDSG
TPFSSPPEKPSKPASDTDDSVSPPKQLFEEGSPAPSAAPVADDQGMSIPVIGSKPPGKAK
PASPPASSSVEPNAASSPKEEPNGLDDSISEAPANRPLSPTQEDLAKRQKDTEVVPVDDS
IFKEPYPPSSDSSVHGDGADTTPLSGSKAKPIPTIDTSRTQRLPSMELPDASSPLPASNS
CRVVKNSIKLALNRHNITPPKPPMFEGTLTPDAAPATEEKGMSIPVIGSKNVTSKHVVPP
VGSSIPTLVSRGADPLNGAASKRPHSPSLEEQAKRLKETEKARIHIA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggtgtcgagcaccatgcctggtgggcagcagcagcagcctcagaaacactat
ggcatcacctctgccattagccttgcacctccacgtgatatagaccaccagtacaccaag
aaactctgcgatgctatgaaaccttttggggtatttgaagatgaagaggaattgaaccat
agacttgcagttcttgggaagttgaataactttgttaaagaatggatctcagagatcagt
gaattaaagaatcttccaccatcagccattagctgtgttggaggcaagatatttacattt
ggttcgtaccgtcttggagtacatacaaaaggagctgatattgatgccttgtgtgtggct
ccacgtcatgtagagaggagtgactttttccagtctttttttgagaaattgaaacagcat
gaagaaatcaaagacttgagggctgtcgaggatgcttttgtaccagtgataaagttcaaa
tttgatggaatagagattgacctgctctttgcaagactggccttgcagtccattccagac
aacctggacctaaggggagactccatcctgagaaacttggacattaggtgtattcgcagc
cttaatggctgtagagtgacagatgaaattttgtacctggtgccaaacaaagaaaacttc
aggctgacattgagagccatcaaactgtgggcgaaacgtcgtgggatctactccaacatg
ctggggtttctgggtggagtgtcgtgggccatgctggtggccaggacctgtcagctctac
cctaacgctgtagccgccacgctcgtgcacaagttcttcttggttttctcaaaatgggag
tggccaaatcctgtcttactgaaacagcctgaggacagtaatctgaatttacccgtgtgg
gatcccagagtgaacccgtctgacagataccacttgatgcccatcatcacgcctgcctat
ccccagcagaactccacgtacaatgtgtccacgtcaacacgcaccatcatgagcgaggag
ttcaaatacggcctaagcatcacagatgagattcttcagggaaaagcagaatggcctaaa
ctctttgagccacccaactttttccaaaaatacaagcattatatagttctgactgccagt
gcatccacagaagaaaaccacttagaatggatcggtctggttgagtcaaagatccgtgtt
ctggttggaaacctggagaggaacgagtacatcaccctggctcacgtcaacccacagtcc
ttcccagggtccaaagagaaccgcaacgagaacgactttgtatccatgtggttcatcggg
attatcttcaagaaagtggagaatgcagagagtgtgaacattgacctgacgtacgacatc
cagtccttcacagacactgtgtacagacaagccaacaacatcaacatgctgaaggacggg
atgaagattgaagcaacacatgtaaagaagaaacagctccatcagtatcttcctcctgaa
gtggtgcagaagaagaagaggagcatagcagagttgaaccgcagctctaacggtgggagc
tcgaagcggatctctctggacagcagtcatctggacagctccagagacacagactcaggg
actcccttcagctccccacccgaaaaaccctccaaacctgcatcggacacagatgacagt
gtcagccctcccaagcagctttttgaggaaggttctccagcacccagtgccgcaccagtt
gctgatgaccagggcatgtctatccctgtcattggctcaaagcctccgggtaaagcgaag
cctgcctccccaccagccagcagcagtgtggagcccaacgctgccagcagccccaaagag
gagcccaacgggctggacgactccatcagtgaagctcctgccaatagaccactgtcgcct
acacaagaggacctggccaagaggcaaaaggacacagaggtggtgcccgttgatgactct
atatttaaggagccatatccaccatcctctgactccagtgtacatggagatggagccgat
actactccactttctggatctaaggctaagcccattccaaccattgatacctcaagaaca
cagagacttcccagcatggagctgccagacgcctcctcgcccctcccagccagcaacagt
tgtcgtgtcgtgaaaaattcaattaaattggccctcaaccgccacaacatcacacctcct
aagcccccgatgtttgagggcaccctcacccctgacgctgcccctgccacggaagagaag
ggcatgtccattcctgtcattggctcgaaaaatgtgacatccaaacacgtggtgccccct
gttggcagctccatccctacattagtgagcagaggagcagacccattaaacggagcagcc
tccaagagaccccactccccctccctggaggagcaggccaagaggctgaaagaaacagag
aaggccagaatccacattgcttga
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