Hippoglossus stenolepis (Pacific halibut): 118118887
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Entry
118118887 CDS
T08308
Symbol
psda
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein psda
KO
K12494
PH and SEC7 domain-containing protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118118887 (psda)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118118887 (psda)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
118118887 (psda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
118118887
NCBI-ProteinID:
XP_035028264
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All DBs
Position
12:24634361..24660482
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AA seq
1725 aa
AA seq
DB search
MSQAGKVLHLYVEVRSVAEEEGQVLERGNSGTSHLTLSCQDVLPPSQRSSTHSSPNRSPD
LSPITRHHTGRGTQSLPPSKSSSRHSVSFQLQNPDATGSPTQFHRQDVLYDEFSQLLQVI
SPGMTGPGRHGSLGRAHSSDVDPYQERLPISPSSTSSGKLTVPTTNRRSYDIQAVEGEDG
RTSVVTYGYIEKANVHSMGSRRELDNPLNRMEGQTLPAHLRKRLSDPVWCNGQPALGDPY
TNHPKPSQNQCTQGSPYLQRATLDAVARDATYRAWEEFGSSEIRRQFGSRGPDNCSPTLP
RHYQSPRCRSWGGSPVLPRSTHTLPSKTQLLEMDRGICRSAVNGLPRSPASDHLCAHTGY
SSHPVVPTSTLYSHGLPQRPWTGDESPRLSSKFHPPLPAGRPTDIQHEIPSRTSPTSNQR
RSGYQTSGNSHHCVDSSYNAKDSIQYCANNMSTFPSKSHSKPLHCSSRTRDAVIGRRSVS
PSLNAEVACKLAMEATKLSSTFAGRGSPSPTPSPAESLRSESPKMVASFLKESQPYASLQ
GQVSPEPLRVDNQNHKWETDKRIPQTRPGLVSPLLSQTGLSSSASPALQARLHRVTTSQS
PASDPQQQRSSSLSKDMSTLHRYQPPQYTGGRKAPGMELRQHDHLFDRSPELCRRLLSSQ
NTDALPVSWTSRHQEWRDTGPVQDRDELCDQDYRQTNCKVYTPSKEENHRIDRENKGVIT
SVQGNQRSVEGISMDQREEVQDHSGAGGTSSQSSSGVTGSVGDSFQLERNDSLFPETSSQ
SSHDTTDTGSGMQSDSGSASTPSSRSQKIAQAKWEFLFGGQREEPRCREGVLDAAAEGSS
TTPLTSGLPSPTPPSSLHLKTANQRRGRDNQGPKFSHHKVRQIEVELVTPYLRGTNPKTG
IIRRSIKYSETDLDAVPLRCYRETDLDEVMRAEAETAEEAEADSAFGSNRSVLGNSSFSP
ADAPPKPRTGRREEGDEEEEEEEEEEEEEEEEEEEEGVVSWASVRMLGDKQRQRATKDED
EVFSLLLKGPMEASSENHGGLKSPISVGSPRRPSDSNLDSFSRHFENIMESHRAKGTSYS
SLDSVDLLTSGSTSVFTFDLPTLTPEIQSQICDSAKQIIELSFAPLARPDPATTSETSRS
EISLSASVARLRAQSKDDTGPPVRSRSEKDSWRRSNLKDGFRKATSAPSLHSSPRERLVD
RPPELLYPQADVAERLALGGSDDELANGTKADLQAAKRLAKRLYHLDGFRKSDVARHLSK
NNEFNQKVAEEYLSNFNFTGLNIDQALRSFLRQFALMGETQERERVLAHFSRRFRQCNPE
SLTTEDSVHTLTCAVMLLNSDLHGNNVGKRMSCSQFISNLEGLNNGRDFXKDLLKTLYSS
IKNEKLQWTIDEEELRKSMSELADVRTDSASHTMKRLGSGGNPLLGVAQQVDGELYKSGF
LVRKVHADPDGKRTARGKRGWKSFYVLLKGLVLYLQKDEYRAERELTEEDVKNAVSIHHS
LAMRAADYSKRPNVFYLRTADWRVFLFQAPNAEQMQSWITRINVVAAMFSAPPFPAAIGS
QKRFSRPLLPGSNTKLSQEEQVKSHENRFRGVSSELADLTTSTPNRKVKGRELEEQKLRQ
DYFDFEKTRYGTYAMLLRAKLASGDEDLTAFESRLFDDGGLQRTHSSPSLPQDAANKEKI
RGTKTSKSLKVTSSSSTTREGSKKKNGSNQQAELQKQSSNQEEGP
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggcaggtaaagtccttcacctgtacgttgaggtgaggtctgttgctgaggag
gaagggcaggttctggaaagaggaaatagtggaactagccacctgacgctttcgtgccaa
gatgtcctccctccctcccagaggagctccactcactctagtcccaaccgcagcccagat
ctttcaccaattactcggcatcacactgggcgcgggacccaaagcttacccccttcaaag
tcctcgtccaggcactcagtcagcttccaacttcaaaacccagacgcaacaggatctccc
acccagttccatcggcaggatgtgttatatgacgaattttctcagttactccaggtcatt
tcacctggaatgaccggtccaggccggcatggatcactgggacgtgcccattcctctgac
gtggatccctaccaggaaaggttaccaatctctccatcttctacatcctctgggaagttg
actgtacccaccaccaaccgtaggtcctatgatatccaggcggtggagggtgaggacgga
aggacatctgtggtgacctatggctacatagaaaaagctaacgttcacagcatgggaagc
cggcgtgagttggacaaccctttaaatagaatggaggggcaaacactacctgcccacctc
cgtaaaagactgagtgacccagtgtggtgcaatggtcagccagcactgggggacccttac
actaatcaccccaagccgtctcagaatcagtgtacgcagggctcaccttacctgcagagg
gctactctggatgctgtagccagagatgccacctacagagcctgggaggagttcggatcc
tcagaaatccggcgacaatttggcagtcgtggcccagacaactgcagcccaactctgcca
cggcactaccaatcccctcgctgcaggtcctggggggggtcacccgtccttccccgaagc
acccacaccctgccatccaagacccagctcttggagatggaccggggaatctgccgtagt
gcagttaatggattacccagaagtccagcctctgaccacctgtgtgcccacactggatac
tcctcccacccagtggttccaacctcaaccttatactcgcatggcctgcctcagaggcca
tggaccggggatgagagccccaggttgtccagcaaatttcatccacctttacctgcgggg
agacccacagacatccaacatgagatcccatctagaacatcccccaccagcaaccagcgc
aggagtggctaccaaacaagtggaaactcccaccactgtgttgatagtagctataatgct
aaagacagtatacagtactgtgctaacaatatgtcaacctttcccagcaagagtcactcc
aaaccattacactgtagtagcagaaccagggatgcagtcattggcaggagaagtgtctcc
ccatccttaaatgctgaagtggcttgtaagttagctatggaggctaccaaattgtccagt
acttttgcaggcagagggtctccctcgccaacaccttctccagctgagtcactgaggtca
gagagtcccaagatggtggcatcattcctaaaagaatcccaaccatatgcctctcttcaa
ggccaagtctcccctgaacctctgcgggtggacaaccagaaccacaaatgggaaacagac
aaacggatacctcaaaccagaccaggacttgtctcccccctcttgtcccagacaggcctc
tcttcctcagcatctccagctttacaggctaggttgcacagagttactacttctcaatct
ccagcttcagacccacagcaacaacggagttcatcactaagtaaagacatgtccaccctg
caccgctaccagccaccacagtacactggaggccgtaaagcacccggtatggagctgagg
cagcatgatcacctctttgatagatcacctgaactctgcaggagacttctctccagccaa
aacacagacgctttgcctgtgagctggacctccaggcaccaggagtggagggacactgga
ccagtccaagacagggacgaactctgtgatcaagactacagacagacaaactgtaaagtt
tacactccaagcaaggaggagaatcataggattgatagagaaaacaaaggagttataacg
tcagtgcaggggaaccagaggtcagttgaaggcatatccatggaccagagagaggaggtt
caggatcacagtggggctggtgggacgtcttctcagagctccagtggggtgacaggcagc
gtgggagacagtttccagctggagagaaacgacagtctgttccctgaaacctcgagccag
tccagccacgatactaccgacaccggctctgggatgcagtcggacagcggctcagcatcg
actccgtcctcgcggtcgcagaagatcgcccaggccaagtgggagttcctgttcggaggc
cagagggaggagcctcgctgccgtgaaggtgtgttagacgctgcagctgaaggctcatcc
acaacgccactgaccagtggtttgcccagccccacccctccctcctccctacatctgaaa
acagctaatcagaggagggggcgggacaaccagggtccaaagttttcacatcacaaagtg
cggcagatcgaggtggagctggtgacgccttacctcagaggcaccaaccctaagacgggt
atcatccgccggagcattaaatactctgaaactgatctggacgctgttccgctgcgctgc
tacagagaaaccgacctggacgaggtgatgcgggcagaggcggagacagcagaggaggca
gaggcggactctgcctttgggagtaaccgcagcgtcctgggaaactccagcttcagcccc
gcggacgcccccccgaaaccccggacaggacgaagggaggagggggatgaagaggaggag
gaggaggaagaagaagaagaagaagaggaggaggaggaggaggaggaaggagtggtgagc
tgggccagtgtcaggatgctcggagacaaacagagacaaagagccactaaagacgaggac
gaggtgttcagtctgctgctgaaggggccaatggaggcttcgtccgaaaaccacggaggc
ctcaagtctccgatctctgtcggcagcccccgccgaccctccgacagcaacctcgactcc
ttcagtcgccattttgaaaacatcatggagtctcaccgggccaaaggcacctcgtacagt
agcctggacagtgtcgacctgctgacctctggatccacgtccgtgttcacctttgacctg
ccgaccctcaccccagagatccagagtcagatttgcgacagcgccaagcagatcattgag
ctgagcttcgccccgctggcccgcccggacccggccaccacctcagagacgtctcgctcc
gaaatctccctcagtgcctcagtggccaggctccgagcgcagtccaaagacgacactggc
cctccggtccgctccaggtcagagaaggattcgtggcgtcgctccaacctcaaagatggc
ttccgaaaggcgacctcggccccgtccctccacagcagccccagggagcgtctggtggac
cgcccccccgagctgctgtacccacaggccgacgtagctgagcgcctggcgctcggcggc
agcgacgacgagctggccaacggcacgaaggccgacctgcaggccgccaaacgcctcgct
aaacgcctctaccacctggacggcttcaggaagtcagacgtcgcccgacacctgagcaaa
aataatgagttcaaccagaaggtggcagaagaatatctcagtaattttaacttcaccggt
ctgaacatcgaccaggcgctcaggtcgttcctgagacagtttgctctgatgggagaaact
caggagagagagagagtcctcgctcacttctctagaagattcagacaatgtaacccagag
agtctgaccactgaagacagcgtccacactctgacctgtgccgtgatgctgctgaactct
gaccttcatggaaacaacgtggggaagcggatgtcctgcagtcagttcatctccaaccta
gaaggtctcaacaacggaagagacttcnccaaagatctgctgaagactctctacagctcc
atcaagaacgagaagctgcagtggaccattgatgaagaggagctgaggaagtcgatgtcg
gagttggctgacgtccgaacagactccgcctcccacaccatgaagcgactgggtagtgga
ggaaacccgctgctgggcgttgcccagcaggtggacggcgagctctacaagagcggcttc
ctggttcgcaaagtccacgccgaccctgacggaaagagaacggcgcggggtaagagaggc
tggaagtctttctacgtcttgctgaagggtcttgtgctctacctgcagaaggacgagtac
cgtgcggagcgggagttgaccgaggaggacgtgaagaacgctgtgtccatccatcactct
ctcgccatgagggcggccgactacagcaagaggcccaacgtgttctacctgaggacggcg
gactggagggtgttcctgttccaggctccaaacgcagaacagatgcagtcatggataacg
cgcatcaacgtggtggcagccatgttctcagctccacccttcccggcggcgatcggctct
caaaagagattcagtcgccctctgctgccgggatccaacaccaaactatcccaggaagag
caggtcaagtctcacgagaaccgcttcaggggcgtttcgtccgagctggcagacctcacg
acctccacgccgaatcgaaaggtcaaaggtcgtgagctggaggaacagaaactccgacag
gattactttgattttgagaaaactcgttacggtacgtacgccatgttgctcagagccaag
ctggcgagcggagacgaggacctgacggccttcgagtctcggctgtttgacgacggaggc
ctgcaaaggacacactccagtccctcgctgcctcaggacgccgccaacaaggagaaaatc
cgaggaaccaagacgtcaaagagcttaaaggtcacgtcgtcatcatcaaccaccagggag
ggaagcaagaagaagaacgggagcaaccagcaagctgagctgcagaaacagagcagcaac
caggaggaggggccgtaa
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