Hippoglossus stenolepis (Pacific halibut): 118118929
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Entry
118118929 CDS
T08308
Name
(RefSeq) glycine receptor subunit beta isoform X1
KO
K05196
glycine receptor beta
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118118929
04082 Neuroactive ligand signaling
118118929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118118929
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118118929
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
118118929
Ion channels [BR:
hsp04040
]
Ligand-gated channels
Glycine
118118929
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
118118929
NCBI-ProteinID:
XP_035028388
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Position
2:745246..769995
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AA seq
520 aa
AA seq
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MAGGYSASNRSSYRSSSDSGTMAAGLRLGFFMGLLLCCCQLITSKEGKSTKKGKKGKQVV
CPSQLSPEDLAQVPANSTSNILNRLMVSYDPRIRPNFQGIPVESKVNIFINSFGSIQETT
MDYRINIFLRQRWNDPRLRLPTDFKSEALTVDPKMFQCLWKPDLFFANEKHANFHDVTQD
NILLFIFRNGDVLISMRLSVTLSCPLDLTLFPMDTQLCKMQLESFGYTTSDLVFMWQSDP
VQMDEIALPQFDIKQEDIKYGNCTKFYQGTGYYTCVEVIFTLRRQVGFYLMGVYAPTLLI
VVLSWLSFWINPDASAARVPLGILSVLSLSSESMLLASELPKVSYVKAIDIWLITCLLFG
FSSLVEYAVVQVMLNSPKRIEEEKTKMANKEKALQEKEGKMEANKTNTVNGTGGTPIHVN
TLQVVETRCKKVCTSKSDLRSNDFSIVGSLPRDFELSNFDCYGKPVEVSGALKSQNKSNK
KPPPPKPVIPAAAKRVDLYARALFPFSFLFFNVVYWSVYL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggatactctgcttcgaacaggtcgtcatacaggtcgtcttccgattcaggt
actatggctgctggattgagattgggtttctttatggggttgctgctgtgttgttgtcaa
ctgatcacatccaaagagggaaaatccacaaagaaaggaaagaaaggcaagcaagttgtc
tgtccatcccagttgtccccagaagatttggcccaggttccagctaactccacctccaac
atcttgaaccgtctgatggtcagttatgacccgagaataagacctaacttccaaggtatc
ccggttgagtccaaggtaaacatcttcattaatagctttgggtccatccaggagaccact
atggactacagaataaatatatttcttcgtcagagatggaatgatccgcgcctacgactt
ccaactgactttaagagtgaagcactaacagttgatcccaagatgttccagtgtttgtgg
aaaccagaccttttctttgctaacgagaaacacgctaacttccatgatgtcacacaggac
aatattctgttgttcatctttcggaatggagatgtcttgatcagcatgaggctgtcggtg
acgctgtcttgtcccttggatcttacactcttcccaatggacacacagctgtgtaagatg
cagctggagagctttggctataccaccagtgatcttgtgtttatgtggcagtccgaccca
gttcagatggatgagattgctcttcctcagtttgacattaaacaagaggacataaaatat
ggaaactgcacaaagttttaccaaggaacaggatactacacctgtgttgaagtgattttt
acattgcgtcggcaggttggtttctatttgatgggagtgtatgccccaactttgttgatt
gttgttttgtcctggttatcattctggataaaccctgatgcttcagctgcaagggtgcca
ctgggtatattatccgtactctctctgtccagtgagagtatgctcttggcatctgagcta
ccaaaggtttcctatgtaaaggctattgatatttggctcatcacctgtctgctttttggg
ttttcgtcacttgtggaatatgctgtggtgcaggtgatgctgaacagccccaaacgaatt
gaggaggagaaaactaaaatggccaacaaggaaaaagctttgcaagagaaagaaggaaag
atggaggcaaataaaactaacacagtgaatgggacaggtggaacacccatacatgtcaac
acattgcaggtggttgaaactcgctgtaagaaagtttgcacctctaagtcggaccttcga
tcgaatgacttcagcatcgtgggatctttacctcgagactttgaactttccaactttgac
tgttatggtaaaccagtcgaagtgtcaggagccctcaagtcccaaaacaaaagtaacaag
aaacccccaccacctaaacctgtcatacctgctgccgccaaacgtgttgacctctatgca
agagccctcttccctttctccttcctcttcttcaatgttgtctactggtcggtctatttg
tga
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