Hippoglossus stenolepis (Pacific halibut): 118118954
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Entry
118118954 CDS
T08308
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118118954
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118118954
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_2
RA_3
SH2
FERM_f0
Lpg0393_VPS9
TUG-UBL1
SH2_1
RelB
Motif
Other DBs
NCBI-GeneID:
118118954
NCBI-ProteinID:
XP_035028427
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All DBs
Position
12:complement(1281804..1324893)
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AA seq
1094 aa
AA seq
DB search
MPSSNVSQPCKQEKGSFFKLIDSFAWEIGTLKKEMGKKPEPAEGDHKTDTLLGLGEEVGG
LFLQASPCAGIGPGLARVRDSGYDSLHLRLSVLDRLVHTHAVWLQLCLSHQDATIMLQNQ
PTGMFVVRKSASLQRKVISLRMDKDSAVPVKDFPVKESQYTFSLEGSGLSFADLFRLVAF
CCISRDVLPFTLKLPEAIASARTSADLEEVAKLGSGFWAAQLCRRRKVLLSGEGTPNRPP
STTQGPVFLAAPPGRPQLQTRTPSELECCQSNGALCFINPLFIKVHQPDGDSSATASGTA
KQVRREEPISNNEETSQDTQPCCGSSPQVCSSNHSDRSQSGQSELHSLIRNTQLQGDNSQ
ANCSQKLTVSRSPPPRPPLPRSVPRRSAPPVRQRSMPEKISWINIPKEKVEERERGSSLL
SRLGSSLSISPSSSPPKRFNISSPISISRPSLPLSLTSLSSSPRRGKLSPSSSQEDAQCH
LALEEQTIEKALMRAKLSQCNATKTTVQVSSSPPEHSMMTTSKQAEKQRGEEEAGEECSG
GSQRLSDMSLSTDSSDSLDFSQSSAFFLPPLHDPSPPTEADFNTHLPLSLPPSHMPYGSM
EEDDDDDDDEDEEEQDYGVSLESDQDQDLTMVPPGHRTNRRPSASALVLQKALRGQLRKM
SGVFHSLLTPEKRAIRRVVELSRDKGSYFGCLVQDYLSYMGEGAGTQAWQGYASGLELLQ
TLRQFITQMKSYLIQSSEMEPPIESLIPEDQIDRVLEKAMHKCVLKPLKPVVSAALQEFQ
VSSGAWQELQENLSLAKARQPQDVGVADMLPPDHVAIEKIKHKFHTMCKLYSPEKKVTLL
LRVCKLIYTIMEDNSGRLYGADDFLPMLTYVLAQCDMPHLDNEILYMMELLDPSQLHGEG
GYYLTSAYGAMSLIRNFQEEQAARVLSSETRDTLHQWHRRRTTQRSAPSIDDFQNYLRVA
LQELDSGCTAKTLQVRPYATVEEVCQLCGQKFKVSDPQNYGLFLLMEGSSQQLAPDTYPQ
KIKAELHSRPQAAPFHFVFRRVANSSTLSTAPFDAIPNLNELSMDLSDSSPQPQRSLRLC
PAPILSLTGGQLEV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgccttccagtaatgtcagtcaaccctgcaaacaagagaagggcagtttcttcaagctg
atcgactcgtttgcctgggaaattggcacactgaagaaagagatggggaaaaagcctgag
cctgcagagggagaccacaagacagatacactccttgggctgggtgaggaggtgggaggt
ctcttcctgcaggcatcgccttgcgctgggattggtccgggactagctcgggtgagagat
tcgggctacgactccctccatctccggctcagtgttctggacagactggtgcatacacat
gctgtgtggttacagctgtgtctcagccaccaggatgccaccatcatgctacagaaccag
cccacagggatgtttgtggtgaggaagtcagccagtctgcagaggaaagttatatctctt
cggatggacaaagactctgcagttcctgtcaaagacttccctgtgaaggagagccagtac
actttctctctggagggatcaggcctgagctttgcagaccttttccgtcttgtggctttc
tgctgcatcagcagggatgtgttgcccttcactctgaagcttccagaggctatcgcttca
gccagaacatctgcagatcttgaggaggttgctaaacttggatcaggcttctgggccgct
cagttgtgccgtaggaggaaggtcttgttgtcaggggaaggaactcccaacagaccacct
tctactactcagggaccagtcttcttggcagcgcccccagggcgcccacagcttcaaact
cgcaccccatctgagcttgagtgttgccaatccaacggagcgctgtgtttcatcaacccc
ctcttcataaaggtccaccaaccagacggcgattcaagtgccaccgcctctggcacagca
aagcaggtgcggagggaggaacctattagcaacaacgaagaaaccagccaggatactcag
ccctgttgtggcagcagtcctcaggtctgcagctcaaatcacagtgacagaagccagtct
ggtcaaagcgaactgcacagcctcatcagaaacacacagctacaaggagataacagtcaa
gccaactgcagtcagaagctaactgtgtctcggtccccaccccctcgtccacctctacca
cgctctgtgccacggcgctcagccccccctgtcagacagcgcagcatgccagagaagatc
tcctggatcaacatccccaaggagaaggttgaggagagagagaggggcagcagcctcctg
tctcgtctgggctcctcactaagcatcagcccctcatcctcccctcccaagagattcaac
atcagctcccctatatccatctcccggccctccctgcccctttctctaacttctctctcc
tcctctccacgtcggggcaagttgtcaccatcatccagccaggaggatgctcagtgccac
ttggcactggaggagcagactattgagaaggctctcatgcgggccaaactgtctcagtgt
aatgctaccaaaaccactgttcaggtgtccagcagtcctccagaacattcaatgatgaca
accagcaagcaggcagagaagcaacgaggagaagaagaagcaggtgaggaatgtagtgga
ggtagccagcggctgagcgacatgagcctctccactgattcatcagattctttggatttc
tctcagtcctcagcgttcttccttcctcctctgcatgaccctagcccccccactgaggct
gactttaacacacacctccccctctccctccccccatcccacatgccttatggcagcatg
gaggaagatgatgacgatgatgacgacgaggatgaagaggagcaagactatggcgtcagc
cttgagagtgatcaagaccaggacctgactatggtgcctcccggacatcgcacaaatcgt
cgccccagtgccagtgctttggtcctccaaaaggccctgcgagggcaactgcgcaagatg
agcggagttttccactcactgctgacgcctgagaagagggcgatccgcagggttgtggag
ctgtccagggacaaaggatcatactttggctgtctggtgcaggactacctgagctacatg
ggcgagggtgcgggcacccaagcctggcagggctacgcctctggacttgagctgctgcag
actctccgccagtttattactcaaatgaagagctacctgatacagagctccgaaatggag
ccgccaattgagagcctaattcctgaagatcagatcgaccgggtcctggagaaagccatg
cacaagtgcgtgttgaagcctctaaagccggtagtgagtgcggccctgcaggagttccag
gtgagcagcggagcgtggcaggagctgcaggagaacctgtcactggccaaggcacggcag
ccgcaagatgtgggtgtcgcagatatgctgcccccggatcacgtggccattgagaagatc
aagcacaagttccacaccatgtgtaaactgtactctccagagaagaaggtcaccctgctg
ctgagagtgtgcaaactcatctacaccatcatggaggacaattcaggtcgtctatatggt
gctgacgacttcctgccgatgctcacctatgttttggcccagtgtgatatgcctcatctg
gacaatgagatactttacatgatggagctgctggacccttcacagcttcatggagaaggt
ggttactatctgaccagcgcctatggagcaatgtccctgatcagaaatttccaggaggag
caagctgctcgagtcctgagctcggaaaccagagacacactccaccagtggcaccggcgc
cgcaccacccagcgctctgctccctccattgatgactttcagaattacctgcgggtggcg
ctgcaggagctggacagtggctgcacggccaagactctacaggtccgcccttacgccacc
gtagaggaggtgtgccagctgtgtggccagaagtttaaagtttctgaccctcagaactac
ggcctcttcttgctgatggagggcagcagccagcagcttgcaccggacacctatcctcag
aagatcaaggctgagctccacagccgcccacaggctgcccccttccacttcgtcttccga
cgtgttgccaacagcagcactctgtcgacagctcccttcgatgctatccccaacctgaat
gagctcagcatggacctgtcggactcctccccccaaccccagcgaagcttacgcctgtgc
ccagctccgatcctcagcctgacagggggccagctggaagtttga
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