Hippoglossus stenolepis (Pacific halibut): 118118985
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Entry
118118985 CDS
T08308
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04510
Focal adhesion
hsp04517
IgSF CAM signaling
hsp04518
Integrin signaling
hsp04519
Cadherin signaling
hsp04520
Adherens junction
hsp04810
Regulation of actin cytoskeleton
hsp04820
Cytoskeleton in muscle cells
hsp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118118985
04518 Integrin signaling
118118985
04519 Cadherin signaling
118118985
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118118985
04520 Adherens junction
118118985
09142 Cell motility
04820 Cytoskeleton in muscle cells
118118985
04810 Regulation of actin cytoskeleton
118118985
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118118985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118118985
04147 Exosome [BR:
hsp04147
]
118118985
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118118985
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118118985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
118118985
NCBI-ProteinID:
XP_035028487
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All DBs
Position
12:complement(12446079..12471104)
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AA seq
1126 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVNSMSTVKELLPVLISAIKIFVATKTTRGAGVEEAERNRKFTFEKMSGE
INEIIRVLQLTTWDEDAWANKKDMEAMKRSLALIESKMALAQSWLKDPHGQPGGHGEVAL
RMILDEAGKVGELCAGKERKDILVTTKALGQMTDQVADLRARGQGPTPGCMQRAGQCLQG
LDLLFGKVDGASRRLEALINAKQAIARRLDAAQAWLADPNGGPEGEENIRALLAEAKRIA
DLCEDPKERDDILRSISEIAGLTAKLMELRKQGKGDSPEARALAKQIGSALMNLQSKTNR
AVANMRPAKPAVTLEGKMEQALRWVNNPWVDDRGVGQAAIRGMVGEGRRLAGGLLGPYRQ
DMIGRCDRTEALMGSLADMAARGEAEAPHARATAAQLQESLKDLRKHMQEVMTQEVSDVF
SDTTTPIKLLAVAATAPADAPNREEVFDERAGNFEAHAGRLGATAEKAAAVGTANKMTVE
GIHAAVKHARDLTPQVTTAARILLKNPGNKAAYEHFDTMKNQWIDNVERLTSLVDEAIDT
KSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRF
RDTVKHASDILSHTISPMVMDAKGVAGNIQDKALQKAYLDSCLRILGAVGKVREAFQPQE
PDFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEERDEEFPEQKVGEVLSEPMM
VAARQLHDEARKWSSKPEDEEVVEEREVDDDDEFTDGEDDYEPELLMMPSNQPVNQPMLA
AAQALHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRAMIQCAKDIAKASDE
VTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDSGCTLRWVRKTPWYQ
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttccacaccaagacgatcgagagtatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacgggaaagccatcccggatctc
acggtgccggtggccgcggtgcaggcggcagtcagcaaccttgtccgggtggggaaggaa
acggttcaaaccaccgaagaccaggtgatgaagagagacatgccccctgctttcattaag
gtggagaattcgagctcgaagcttgtccaggcggcgcagatgctaaaggcagatccatac
tctgttcccgcacgagattacctgatcgatgggtccagagggatactgtcggggacgtcc
gacctgctgctcaccttcgatgaggcagaggtgcgtaagatcatcagagtatgtaaagga
atcctggagtatctgactgtagccgaggtggtggagaccatggaggacctcatcacttac
accaagaacctgggtccagggatgaccaaaatgtcaaaaatgattgaggagaggcagcag
gagctgacgcaccaagaacacagacagatgctggtcaactccatgagcactgtcaaagag
ctgctgcctgtcctcatatcagctataaagatctttgtcgcaacaaagaccacccgaggt
gccggcgtggaggaggcggagaggaacagaaagttcacctttgaaaagatgagcggtgaa
atcaatgagattataagggtcttacagctcaccacgtgggatgaagacgcgtgggccaac
aagaaggatatggaggctatgaagagatctctcgctttgattgagtctaagatggcacta
gctcaaagttggctcaaagaccctcatggacagccaggtggccacggcgaggtcgccctg
cgtatgatactggacgaagccggtaaggtgggagagctgtgtgctgggaaggagaggaaa
gatattcttgtaactaccaaggctctgggacaaatgaccgaccaggtcgcagatctacga
gccagaggccagggcccgacccccgggtgcatgcagcgtgccggccagtgcttgcagggc
ttagacttgttatttggcaaagtggatggagcttcccgcagactggaggctctcatcaac
gccaagcaggccatcgccaggaggctggacgcagcacaggcctggctggctgatcctaac
ggtggtcccgagggggaggagaacatcagagcgctgcttgcagaggccaaacgcatcgct
gacctgtgcgaagatcccaaagagagggacgacatcctgcgctccatcagtgagatcgcc
gggctcaccgccaaactcatggagctccgcaaacagggcaaaggtgacagtccggaggcc
cgtgcactggcaaagcagattggttcggcgctaatgaacctgcagtcgaaaaccaacaga
gccgtggccaacatgaggccggcaaagcccgccgtcaccttggagggaaagatggagcag
gccctccgctgggtgaacaacccctgggtggacgacagaggagtaggtcaggcagcgatc
agaggaatggttggagaagggaggaggttggcaggaggcttgttaggcccgtatcgacag
gacatgattggacgctgcgaccgaacagaggccctaatgggatctttggcagacatggcg
gccaggggcgaggcagaggctcctcacgcacgagccacagccgcgcagctgcaggaaagc
ctcaaggacctgaggaagcacatgcaggaggtgatgacccaggaggtgtctgatgttttc
agtgacaccaccacccctatcaagctgctggctgtggctgcaactgctccagctgatgcc
cccaacagggaggaggttttcgacgagcgtgcagggaactttgaggcccacgcaggtcgg
ctgggggcgacggccgagaaggctgctgccgtgggaacagccaataagatgacagtagag
gggattcatgctgctgtgaaacatgccagggacctcacgccacaggtgaccaccgctgct
cggatcctgttaaagaatcctggaaacaaagcagcgtacgagcactttgacaccatgaag
aaccagtggattgacaacgtggagagactcactagtctggtggacgaggccatcgacacc
aaatctctcctagatgcttccgaggaggctataaagaaagacatcgacaagtgccgagtt
gccatggcaaatgttcagccccaaatgcttgttgccggggcaacaagcatagcaagacga
gctaaccgggtcctgttggtggcaaagagggaagtggagaactctgaagatccgcgcttc
agagacacagtgaaacatgcgtcagacatcctctcacacaccatctcacccatggtgatg
gacgccaagggggtggctggaaacattcaagataaagctctgcagaaggcctacctggac
tcatgtctgaggatccttggtgccgtaggaaaagttagagaagctttccaacctcaggag
cctgatttccctcctcctcctcctgacctggaccagctccatgtcagtgatgagcaggcg
ccacccaagccccccttgccagagggcgaggtgcccccgccgcggccccctcccccagaa
gagagggacgaggagttccctgagcagaaggtcggggaggtgctcagcgagcccatgatg
gtggcggccaggcagctgcacgacgaggcgcgcaagtggtccagcaagcctgaggatgag
gaggtggtagaggagagggaggtagatgatgacgatgagtttactgatggtgaggatgac
tatgagccagagctgctgatgatgccctccaaccagcctgtcaatcaacccatgctggca
gcagcccaggctctccaccaggaggcgcgcaaatggtccagcaagggtaatgacatcatc
gcggcggccaagcgcatggctctgctgatggcagaaatgtcccggctggtgcgcggcggg
agcgggaacaagcgggcgatgattcagtgcgccaaggacatcgccaaggcctcggatgag
gtgacgagactggctaaggaggtggccaagcagtgcaccgacagacgcatcaggaccaac
ctgctgcaggtgtgtgagcgcatcccgaccatcagcacgcagctgaagatcctctccacc
gtcaaagccaccatgctgggacggacaaacatcagtgaagaggagtcagagcaggccacc
gagatgttggtccacaacgcccagaatctgatgcagtcagtgaaggagaccgtcagggaa
gccgaagccgcctccatcaagatccgcacggactcaggatgcacccttcgatgggtgcgc
aagaccccttggtaccaataa
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