Hippoglossus stenolepis (Pacific halibut): 118119096
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Entry
118119096 CDS
T08308
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118119096 (cfap43)
Cilium and associated proteins [BR:
hsp03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
118119096 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_THOC3
Beta-prop_EML_2
WDR55
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
CFAP43_N
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
118119096
NCBI-ProteinID:
XP_035028677
LinkDB
All DBs
Position
12:16056636..16074164
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AA seq
1649 aa
AA seq
DB search
MVAIGSLEVRWIQGFTNSTVHFVDNDTVCYTCGNHICFLNLETKSKSLLQGPGRGIGAFT
ARGTSGIFAFSEQRLSPSIFVHVFPELHMKNELKGTAQLDYTSLALSDGGPYLGCCSSLP
DHTITVWNWETAEPICTQPQAGKDVISLVFNPMNWLQLCALGTASITVWNIEKSASLHVL
KPCVVQLPATDGSLAERSNCQTYTVKPPHFGQKIPPSTISRLEGNKAENIVTKLTSGARL
TPTAICWTATSDLFVGCAEGYLFLVNPENLSVSVLFNPTTPDVAPELADLRQSSFQDLTL
NKNGVVAVGKDGVVQCMQIKGTQIDITQTWQIEETATAAIYSPNYETLLLSSNTGQIYVL
NSIRSDKFVKVLDVLSGNFVAAAWSHAKNLCVSVRDSGELQLWTVDGVCLGSLTLQAEVT
SVACCPIAQYAAVGTTSGNILFVDLNREQEPRLVHQVQLYHSPVDHLVFDQEGHYLLTGA
SDSHIYVIDAKPSKKFSIIGYTVVPGPILSLSTQCVRDGEQVKVLALCTRQEGNNHDSSL
LTLLSLPAKDLTGPDCVDRHGCLSPHVLKVSTYEVTHPLESCVLGVSEIFAYCHRKKTLQ
RFQFPQDTHGPSSPQVLQPELEVKGHPLGPASLALSPHQLWLASVGQDGLLCIRETASMD
RYMELQCHPCRLAGVRSVTFSADGLTLLTAGCKDGSLVCTNVRIKAGEAGVKKSAQYSQA
TARFLKNIFNTENPVLVDLPAWRQESCLGSEKPKESEVSSGAETVDVSEQDESSNVLLSA
PPSHPTWLEGRRQAVMEEENEKYSEKKENLRKTMRELRGAIQEMLCENETLPANERLAQK
EFNLDLEDQRHQAAVVEQEVTRVRKEIEWEILEKCYLRDVLKKECWDSVKVKGRAIKAFH
SEREVKNYPLKERTEKEVKELRKVENIRKIEMAACTKSSNTSILKEEEQGEEDNTAEKAA
VSGSFSTQFGYSNPHIYDQFSLNTTEQRINQIVLLQDVIYGIKMAFNTEFEGLHRQKVQE
LNRVRERNKLISAILLELDIQQQLWEPSLTVSEWPERLLTVDDTEIKSEKCLTPEQRKEE
ERKKLEEQRRLASKEDDCRDRALDNMMDGALEVKKEDILRMEVPPPELVLTKPEIQWTEE
EKKVYKQYEKKTKDLSERKEKYRKLMETEMKRLQAATRDATKKFDETLTKQFEKKIKFEM
AVYQGKLQIAQLVCAVLLEEEMRNRELELMLKLEKLLAHKEELEEEVKLREEDVELFHET
YDTVVAEDKILDKEFRKEFCDVPAQIVDHLYKLFKRRPRVQKLRTQTDNNPNPFRDQRLC
GSQAPDALGKMLKAMEELDAPENKPEGLNPSIWERFCLVRRTKTESEQKVKVKALALAEM
QAFLQKRRDENEAAEQEIKNLSDERESLYKEKNHAQINIMVQVVLKQGHVSTADVTAEDS
DFILLHRSVVEELNKTIRMLGEQKIASMVECKDFRKGTMQLEWEHKMIRAQIEDLNTKAR
DIQTLRLSEEQRDYLNETDREGLVSKQVSTLAKTIDFQEMTHQHNVQKRMKEIEHLNKQA
AKKAQRNKILEQQHPGMRVIVAERRHIHDSADSEENLAATTEDSFRVIAQQKKLKDFTRA
QMEDLVFLESELERLRMRSFPSLDQLKHN
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccattggaagtttagaagtcaggtggattcaaggattcacaaacagcaccgtc
cactttgtggacaatgacactgtgtgttacacatgtgggaatcacatctgtttcctcaac
cttgagactaaatcaaaaagtttgctccagggccccggcagaggcatcggtgcattcaca
gccagaggcaccagtgggatttttgccttttctgagcaaaggttgtccccatctatattt
gtgcacgtgttccctgagcttcacatgaagaatgaacttaaaggaacggcacaactggac
tacacatctctggcattaagtgatggtggcccttatttgggctgttgttcctctcttcca
gaccacaccattacagtgtggaactgggaaactgcagagccaatctgcacacaaccacaa
gccgggaaagatgtaatttctctggtgttcaacccaatgaattggcttcagctttgtgct
ttgggcactgcatccatcaccgtgtggaatattgagaagagtgccagcctccatgtacta
aaaccatgtgtggtacagcttcctgcaactgatggatccttggctgagagatcaaactgt
caaacttatactgtcaaacctccccactttggccaaaagattcctccatcaaccatctca
aggctcgagggcaacaaggcagaaaacattgtgacaaaactcacctctggagccagactg
actcctactgccatctgctggacagccacatcagatctctttgtgggctgtgctgaggga
tatctgttccttgttaacccagagaacctctctgtctctgttctcttcaaccccacaact
ccggatgttgccccggaactcgctgatctcagacagagcagctttcaagatttaaccctt
aacaagaatggggtggtcgctgtagggaaggacggtgtggtgcaatgtatgcaaatcaaa
gggactcagattgacatcacacaaacatggcagatagaagaaactgccacagccgcaatc
tactcccctaactatgaaacattacttctatcttctaatacagggcagatctacgtgttg
aattcgatccggtcagacaagtttgtgaaggtcctggacgtcctcagcggaaactttgtg
gcagcagcttggtcgcacgccaagaacctttgtgtgtcagtgagggattctggagagctg
cagctgtggaccgtagatggcgtgtgcctcggttcccttactcttcaagctgaggtgaca
agtgtggcctgctgtcctattgcacaatacgcagctgtaggaacaacgtcaggaaacatc
ctctttgttgacctgaacagggagcaggagcctcgcctggtgcaccaggttcagctctac
cactctcccgtggatcacctagttttcgatcaggaggggcactaccttctaactggagct
tcagattcacatatctatgtaatagatgcaaagccatcaaagaagttttcaatcatagga
tacacagttgttcctggtcccattttgtcactttccactcagtgcgtcagggatggtgaa
caggtgaaagttcttgcactgtgcactcgacaggaaggaaacaatcatgacagtagtctg
ctcacacttctctccctgcctgcaaaagaccttacaggccctgactgtgtagaccgacat
ggttgtctgtctcctcacgtcctcaaagtgtccacttatgaagtgactcatccacttgag
tcctgtgtcctgggagtcagcgagatctttgcttactgccacaggaagaaaactcttcag
cggtttcagttcccccaggacacacatggtccctccagtccacaggtgctacaaccagag
ctggaggtgaagggtcatccgctgggccccgcctctctcgctctgtctcctcatcagtta
tggctggcgtctgtaggtcaagacggccttctgtgtattagagaaactgcttccatggat
cgatacatggagctccagtgtcatccatgtcgtctcgctggagtccggagtgtgaccttc
tctgcagacggcctgacactcctcaccgctggctgcaaagacggctctctcgtgtgcacc
aatgtcaggattaaagctggggaagctggggtgaagaaatctgctcagtatagccaggcc
acggctcgtttcttaaagaatatattcaacacagagaaccctgtccttgttgacttgcct
gcatggagacaggaatcctgtctgggctctgaaaaaccaaaggagagtgaggtcagcagt
ggagcagagaccgtggatgtgtcggagcaggatgagagttctaacgtcctcctgtctgct
ccaccttcacaccccacctggctggaaggcagacgacaggcggtgatggaagaagaaaat
gagaaatattctgagaaaaaagaaaacctgaggaaaaccatgagggagttacgcggcgct
atccaggagatgctgtgtgaaaatgagaccctcccagctaacgagcgtctggcacaaaaa
gagtttaacctggatcttgaggatcagagacatcaagcggccgtggtggagcaggaggtt
acgagggtgagaaaagaaatagagtgggagattttggagaaatgctacctccgtgatgtc
ctgaagaaagagtgttgggattcagtgaaggtcaagggacgggccattaaggcgtttcac
tctgaacgtgaggtgaagaattatcctctgaaggagcgaactgagaaagaggtgaaggaa
cttcgcaaggttgagaacatcaggaagattgaaatggctgcctgcactaaaagttccaat
acatccatcttgaaggaggaagagcagggagaggaagacaacacagctgagaaagctgct
gtttcaggaagtttctccactcagtttggatattcaaaccctcacatctacgatcagttc
agcctgaataccacagaacagaggatcaaccagattgttctgctacaggatgtgatttat
ggcatcaagatggctttcaacactgagtttgagggcttgcacaggcagaaggtgcaggag
ctgaaccgtgtgagggaaaggaacaaactcatcagtgcgatcctgctggagctggacatc
cagcagcagctgtgggagcccagcctgactgtcagcgagtggccagagaggctgctcact
gtggacgacactgagataaaatcagaaaagtgcctcaccccagagcagaggaaggaggag
gaaaggaagaagctggaagagcaaagacgtttagcttccaaggaggatgattgcagagat
cgggctcttgataacatgatggatggagcacttgaagtgaagaaagaggacatcttgaga
atggaagtacctccgcctgagcttgttttgaccaaacctgaaattcagtggactgaggag
gagaaaaaagtctacaaacagtatgaaaagaaaaccaaagatctgagtgagaggaaagag
aaatacagaaagttaatggaaactgaaatgaaaagacttcaggcagccaccagggacgca
accaagaagtttgatgaaactttgacaaagcagtttgagaagaaaataaaattcgaaatg
gctgtttatcagggaaagcttcagatcgcccagcttgtctgtgcagtactcctagaagag
gagatgagaaatcgagagctggagctcatgctcaaacttgaaaaactgctggcgcacaag
gaagagcttgaggaggaggtgaagttacgtgaagaagatgtagaattgtttcacgagacc
tatgacaccgtcgtagctgaggacaaaattctcgataaagaattcaggaaggagttctgt
gatgtacctgcacaaattgttgatcatttgtataagctcttcaaacgcagacccagggtt
caaaagttgaggactcagaccgacaacaaccccaacccgttcagagatcagcgtctgtgc
ggctctcaggctcccgatgcgcttggcaaaatgctgaaggccatggaagagctggatgct
ccggaaaataaacctgagggcttgaacccatcaatctgggagagattctgtcttgtccgc
agaacaaaaacagagagcgagcaaaaggtaaaagtaaaagctttggctcttgctgagatg
caggcgttcttacagaagaggagagatgagaatgaggctgctgaacaggaaattaaaaat
ctctcagacgaacgtgaaagtctttataaggagaagaaccatgcccagatcaacatcatg
gtccaggtcgtcctcaaacagggtcacgtgtccactgcagatgtgacagctgaggactct
gacttcatactcctccacaggagtgtggtggaggagctcaacaaaaccatcaggatgctt
ggagagcagaagattgcctccatggttgagtgtaaagacttccgtaaaggcaccatgcag
ctggagtgggagcacaagatgataagggcgcagatagaggacctcaacaccaaggcgagg
gacattcagacgctgcgtctctctgaggagcaacgggattatctcaacgagacagatcga
gaaggtctcgtgtccaagcaagtttccaccctggcgaaaacaatcgatttccaggaaatg
actcatcaacacaatgtgcagaaacgcatgaaagagattgagcatctcaacaagcaggca
gcgaagaaagcacagaggaacaaaatcttagagcagcagcaccctggaatgcgggtgatt
gtggcggagaggagacacatccatgattcagcagattctgaggagaatctggcagccaca
acagaggacagcttccgggtgatcgctcagcagaagaaattgaaggatttcaccagagcc
cagatggaagatctggtttttcttgagtcagaacttgagcgtctgaggatgaggagcttt
ccttcactggatcaactgaaacacaactga
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integrated database retrieval system
